Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:47 (2726210): wrapper (7.7.26015): starting
00:12:47 (2726210): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:12:47] Arguments: --nthreads 8
[2025-11-26 00:12:47] Threads: 8
[2025-11-26 00:12:47] Checking for CVMFS
[2025-11-26 00:12:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:12:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:12:50] 2.13.3.0 10299 29614 382952 153310 2 70 29213184 32935937 54760 16776704 0 291837218 99.814 134507740 28773 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:12:50] CVMFS is ok
[2025-11-26 00:12:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:12:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:12:50] Further information can be found at the LHC@home message board.
[2025-11-26 00:12:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:12:50] Checking for apptainer binary...
[2025-11-26 00:12:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:12:50] Running /usr/bin/apptainer --version
[2025-11-26 00:12:50] apptainer version 1.4.4-1.el9
[2025-11-26 00:12:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:12:51] c-3-40.aglt2.org
[2025-11-26 00:12:51] apptainer works
[2025-11-26 00:12:51] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:12:51] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:12:51] Starting ATLAS job with PandaID=6895382895
[2025-11-26 00:12:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:07:31]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:07:31] 2025-11-27 02:06:55,448 | INFO     | monitor loop #3937: job 0:6895382895 is in state 'finished'
[2025-11-26 21:07:31] 2025-11-27 02:06:55,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,037 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:07:31] 2025-11-27 02:06:56,051 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2983.047225
[2025-11-26 21:07:31] 2025-11-27 02:06:56,067 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6895382895/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,068 | INFO     | extracted standard info from prmon json
[2025-11-26 21:07:31] 2025-11-27 02:06:56,068 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:07:31] 2025-11-27 02:06:56,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:07:31] 2025-11-27 02:06:56,123 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:07:31] 2025-11-27 02:06:56,125 | INFO     | sum of square deviations: 577002975205.0414
[2025-11-26 21:07:31] 2025-11-27 02:06:56,210 | INFO     | sum of deviations: 3246067314394.919
[2025-11-26 21:07:31] 2025-11-27 02:06:56,210 | INFO     | mean x: 1764171692.7829268
[2025-11-26 21:07:31] 2025-11-27 02:06:56,210 | INFO     | mean y: 2874438.767479675
[2025-11-26 21:07:31] 2025-11-27 02:06:56,210 | INFO     | intersect: -9921892529.528353
[2025-11-26 21:07:31] 2025-11-27 02:06:56,211 | INFO     | chi2: 14.802096938257783
[2025-11-26 21:07:31] 2025-11-27 02:06:56,225 | INFO     | sum of square deviations: 569995148339.2771
[2025-11-26 21:07:31] 2025-11-27 02:06:56,339 | INFO     | sum of deviations: 3672518887095.753
[2025-11-26 21:07:31] 2025-11-27 02:06:56,339 | INFO     | mean x: 1764171540.2881632
[2025-11-26 21:07:31] 2025-11-27 02:06:56,339 | INFO     | mean y: 2883718.7485714285
[2025-11-26 21:07:31] 2025-11-27 02:06:56,339 | INFO     | intersect: -11363797770.843039
[2025-11-26 21:07:31] 2025-11-27 02:06:56,368 | INFO     | chi2: 11.476489499132272
[2025-11-26 21:07:31] 2025-11-27 02:06:56,369 | INFO     | current chi2=11.476489499132272 (change=22.467137277895283 %)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,382 | INFO     | right removable region: 1224
[2025-11-26 21:07:31] 2025-11-27 02:06:56,384 | INFO     | sum of square deviations: 569994185759.2773
[2025-11-26 21:07:31] 2025-11-27 02:06:56,487 | INFO     | sum of deviations: 2738064782319.4663
[2025-11-26 21:07:31] 2025-11-27 02:06:56,488 | INFO     | mean x: 1764171845.2881632
[2025-11-26 21:07:31] 2025-11-27 02:06:56,488 | INFO     | mean y: 2885491.321632653
[2025-11-26 21:07:31] 2025-11-27 02:06:56,489 | INFO     | intersect: -8471616389.971365
[2025-11-26 21:07:31] 2025-11-27 02:06:56,493 | INFO     | chi2: 10.318146783790807
[2025-11-26 21:07:31] 2025-11-27 02:06:56,493 | INFO     | current chi2=10.318146783790807 (change=30.292668485893188 %)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,497 | INFO     | sum of square deviations: 563042374125.9478
[2025-11-26 21:07:31] 2025-11-27 02:06:56,666 | INFO     | sum of deviations: 2292571182031.903
[2025-11-26 21:07:31] 2025-11-27 02:06:56,667 | INFO     | mean x: 1764171997.7934427
[2025-11-26 21:07:31] 2025-11-27 02:06:56,667 | INFO     | mean y: 2895263.313114754
[2025-11-26 21:07:31] 2025-11-27 02:06:56,667 | INFO     | intersect: -7180382706.781865
[2025-11-26 21:07:31] 2025-11-27 02:06:56,668 | INFO     | chi2: 6.9857583422287055
[2025-11-26 21:07:31] 2025-11-27 02:06:56,668 | INFO     | current chi2=6.9857583422287055 (change=32.29638530435606 %)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,670 | INFO     | sum of square deviations: 556147530641.3334
[2025-11-26 21:07:31] 2025-11-27 02:06:56,701 | INFO     | sum of deviations: 2110405695413.9258
[2025-11-26 21:07:31] 2025-11-27 02:06:56,702 | INFO     | mean x: 1764172150.2962964
[2025-11-26 21:07:31] 2025-11-27 02:06:56,726 | INFO     | mean y: 2899288.1613168726
[2025-11-26 21:07:31] 2025-11-27 02:06:56,726 | INFO     | intersect: -6691581489.956213
[2025-11-26 21:07:31] 2025-11-27 02:06:56,727 | INFO     | chi2: 6.383331375475173
[2025-11-26 21:07:31] 2025-11-27 02:06:56,728 | INFO     | current chi2=6.383331375475173 (change=8.623644524201177 %)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,728 | INFO     | left removable region: 30
[2025-11-26 21:07:31] 2025-11-27 02:06:56,729 | INFO     | sum of square deviations: 527805803463.545
[2025-11-26 21:07:31] 2025-11-27 02:06:56,762 | INFO     | time since job start (75172s) is within the limit (172800.0s)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,894 | INFO     | sum of deviations: 2410701111568.9653
[2025-11-26 21:07:31] 2025-11-27 02:06:56,894 | INFO     | mean x: 1764172424.7964823
[2025-11-26 21:07:31] 2025-11-27 02:06:56,894 | INFO     | mean y: 2915866.9916247907
[2025-11-26 21:07:31] 2025-11-27 02:06:56,894 | INFO     | intersect: -8054768223.535697
[2025-11-26 21:07:31] 2025-11-27 02:06:56,931 | INFO     | chi2: 2.0854579576575185
[2025-11-26 21:07:31] 2025-11-27 02:06:56,931 | INFO     | current memory leak: 4.57 B/s (using 1194 data points, chi2=2.09)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,932 | INFO     | could have reported an average CPU frequency of 2957 MHz (44 samples)
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | ..............................
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . Timing measurements:
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . get job = 0 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . initial setup = 5 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . payload setup = 56 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . stage-in = 0 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . payload execution = 75016 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . stage-out = 7 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | . log creation = 0 s
[2025-11-26 21:07:31] 2025-11-27 02:06:56,933 | INFO     | ..............................
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | 
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | job summary report
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | --------------------------------------------------
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | PanDA job id: 6895382895
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | task id: 47556149
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | errors: (none)
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | pilot state: finished 
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | transexitcode: 0
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | exeerrorcode: 0
[2025-11-26 21:07:31] 2025-11-27 02:06:57,172 | INFO     | exeerrordiag: 
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | exitcode: 0
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | exitmsg: OK
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | cpuconsumptiontime: 249689 s
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | nevents: 1000
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | neventsw: 0
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | pid: 2758764
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | pgrp: 2758764
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | corecount: 8
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | event service: False
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | sizes: {0: 2284082, 1: 2284166, 2: 2284166, 3: 2284393, 14: 2284393, 25: 2284421, 33: 2284839, 35: 2284895, 75078: 2344052, 75079: 2344051, 75086: 2353101, 75087: 
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | --------------------------------------------------
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | 
[2025-11-26 21:07:31] 2025-11-27 02:06:57,173 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 21:07:31] 2025-11-27 02:06:57,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:07:31] 2025-11-27 02:06:57,245 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,245 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:07:31] 2025-11-27 02:06:57,245 | INFO     | job 6895382895 has completed (purged errors)
[2025-11-26 21:07:31] 2025-11-27 02:06:57,245 | INFO     | overall cleanup function is called
[2025-11-26 21:07:31] 2025-11-27 02:06:58,273 | INFO     | --- collectZombieJob: --- 10, [2758764]
[2025-11-26 21:07:31] 2025-11-27 02:06:58,273 | INFO     | zombie collector waiting for pid 2758764
[2025-11-26 21:07:31] 2025-11-27 02:06:58,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:07:31] 2025-11-27 02:06:58,273 | INFO     | collected zombie processes
[2025-11-26 21:07:31] 2025-11-27 02:06:58,273 | INFO     | will attempt to kill all subprocesses of pid=2758764
[2025-11-26 21:07:31] 2025-11-27 02:06:59,599 | INFO     | process IDs to be killed: [2758764] (in reverse order)
[2025-11-26 21:07:31] 2025-11-27 02:06:59,876 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:07:31] 2025-11-27 02:06:59,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:07:31] 2025-11-27 02:06:59,937 | INFO     | did not find any defunct processes belonging to 2758764
[2025-11-26 21:07:31] 2025-11-27 02:06:59,979 | INFO     | did not find any defunct processes belonging to 2758764
[2025-11-26 21:07:31] 2025-11-27 02:06:59,989 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:07:31] 2025-11-27 02:06:59,990 | INFO     | ready for new job
[2025-11-26 21:07:31] 2025-11-27 02:06:59,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:07:31] 2025-11-27 02:06:59,996 | INFO     | ***************************************
[2025-11-26 21:07:31] 2025-11-27 02:06:59,998 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:07:31] 2025-11-27 02:06:59,998 | INFO     | ***************************************
[2025-11-26 21:07:31] 2025-11-27 02:06:59,998 | INFO     | 
[2025-11-26 21:07:31] 2025-11-27 02:07:00,002 | INFO     | architecture information:
[2025-11-26 21:07:31] 2025-11-27 02:07:00,003 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:07:31] 2025-11-27 02:07:00,065 | INFO     | cat /etc/os-release:
[2025-11-26 21:07:31] NAME="CentOS Linux"
[2025-11-26 21:07:31] VERSION="7 (Core)"
[2025-11-26 21:07:31] ID="centos"
[2025-11-26 21:07:31] ID_LIKE="rhel fedora"
[2025-11-26 21:07:31] VERSION_ID="7"
[2025-11-26 21:07:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:07:31] ANSI_COLOR="0;31"
[2025-11-26 21:07:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:07:31] HOME_URL="https://www.centos.org/"
[2025-11-26 21:07:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:07:31] 
[2025-11-26 21:07:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:07:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:07:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:07:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:07:31] 
[2025-11-26 21:07:31] 2025-11-27 02:07:00,065 | INFO     | ***************************************
[2025-11-26 21:07:31] 2025-11-27 02:07:00,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 21:07:31] 2025-11-27 02:07:00,594 | INFO     | sufficient remaining disk space (65910341632 B)
[2025-11-26 21:07:31] 2025-11-27 02:07:00,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:07:31] 2025-11-27 02:07:00,595 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:07:31] 2025-11-27 02:07:00,595 | INFO     | update_server=False
[2025-11-26 21:07:31] 2025-11-27 02:07:00,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:07:31] 2025-11-27 02:07:01,130 | INFO     | all data control threads have been joined
[2025-11-26 21:07:31] 2025-11-27 02:07:01,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:07:31] 2025-11-27 02:07:01,214 | INFO     | all payload control threads have been joined
[2025-11-26 21:07:31] 2025-11-27 02:07:01,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:07:31] 2025-11-27 02:07:01,492 | INFO     | aborting loop
[2025-11-26 21:07:31] 2025-11-27 02:07:01,604 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:01,649 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:01,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:01,794 | INFO     | all job control threads have been joined
[2025-11-26 21:07:31] 2025-11-27 02:07:02,101 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,138 | INFO     | [data] control thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:07:31] 2025-11-27 02:07:02,220 | INFO     | [payload] control thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,362 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,470 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,474 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,495 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,499 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,545 | INFO     | [job] validate thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:02,805 | INFO     | [job] control thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:03,191 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:03,199 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:03,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:07:31] 2025-11-27 02:07:07,239 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:07:31] 2025-11-27 02:07:19,922 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:07:31] 2025-11-27 02:07:20,928 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945745495872)>', '<ExcThread(monitor, started 139945243035392)>']
[2025-11-26 21:07:31] 2025-11-27 02:07:25,954 | INFO     | all workflow threads have been joined
[2025-11-26 21:07:31] 2025-11-27 02:07:25,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:07:31] 2025-11-27 02:07:25,956 | INFO     | traces error code: 0
[2025-11-26 21:07:31] 2025-11-27 02:07:25,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:07:31] 2025-11-27 02:07:30,936 | INFO     | PID=2738923 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:07:31] 2025-11-27 02:07:30,937 | INFO     | .. there are 85 such processes running
[2025-11-26 21:07:31] 2025-11-27 02:07:30,937 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:07:31] 2025-11-27 02:07:30,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:07:31] 2025-11-27 02:07:30,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:07:31] 2025-11-27 02:07:30,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:07:31] 2025-11-27 02:07:30,937 | INFO     | [monitor] control thread has ended
[2025-11-26 21:07:31] 2025-11-27 02:07:31,288 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:07:31] 2025-11-27 02:07:31,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:07:31] 2025-11-27 02:07:31,296 [wrapper] pilotpid: 2738923
[2025-11-26 21:07:31] 2025-11-27 02:07:31,298 [wrapper] Pilot exit status: 0
[2025-11-26 21:07:31] 2025-11-27 02:07:31,341 [wrapper] pandaids: 6895382895
[2025-11-26 21:07:31] 2025-11-27 02:07:31,511 [wrapper] cleanup supervisor_pilot 1490348 2738924
[2025-11-26 21:07:31] 2025-11-27 02:07:31,528 [wrapper] Test setup, not cleaning
[2025-11-26 21:07:31] 2025-11-27 02:07:31,534 [wrapper] apfmon messages muted
[2025-11-26 21:07:31] 2025-11-27 02:07:31,537 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:07:31] 2025-11-27 02:07:31,544 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:07:31]  *** Error codes and diagnostics ***
[2025-11-26 21:07:31]     "exeErrorCode": 0,
[2025-11-26 21:07:31]     "exeErrorDiag": "",
[2025-11-26 21:07:31]     "pilotErrorCode": 0,
[2025-11-26 21:07:31]     "pilotErrorDiag": "",
[2025-11-26 21:07:31]  *** Listing of results directory ***
[2025-11-26 21:07:31] total 1327392
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 22:19 pilot3.tar.gz
[2025-11-26 21:07:31] -rwx------. 1 boincer umatlas     36292 Nov 23 22:42 runpilot2-wrapper.sh
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 22:42 queuedata.json
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:07:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:12 run_atlas
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:12 job.xml
[2025-11-26 21:07:31] -rw-r--r--. 2 boincer umatlas 409678651 Nov 26 00:12 EVNT.47483658._001214.pool.root.1
[2025-11-26 21:07:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:12 start_atlas.sh
[2025-11-26 21:07:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:12 shared
[2025-11-26 21:07:31] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:12 input.tar.gz
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:12 boinc_lockfile
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 00:12 pandaJob.out
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas        57 Nov 26 00:12 setup.sh.local
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas    991877 Nov 26 00:14 agis_schedconf.cvmfs.json
[2025-11-26 21:07:31] drwx------. 5 boincer umatlas      4096 Nov 26 00:14 pilot3
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:52 boinc_task_state.xml
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 21:01 init_data.xml
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas 923550227 Nov 26 21:05 HITS.47556149._002001.pool.root.1
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas      1059 Nov 26 21:06 memory_monitor_summary.json
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas   2255810 Nov 26 21:06 log.47556149._002001.job.log.tgz.1
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas        95 Nov 26 21:06 pilot_heartbeat.json
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas      8609 Nov 26 21:06 heartbeat.json
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:07 boinc_mmap_file
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas       823 Nov 26 21:07 pilotlog.txt
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:07 wrapper_checkpoint.txt
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas   8791648 Nov 26 21:07 log.47556149._002001.job.log.1
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas       353 Nov 26 21:07 output.list
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:07 runtime_log
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas  11069440 Nov 26 21:07 result.tar.gz
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 21:07 runtime_log.err
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas       658 Nov 26 21:07 gM0MDmoech8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeOLKDmsTjZTo.diag
[2025-11-26 21:07:31] -rw-r--r--. 1 boincer umatlas     21379 Nov 26 21:07 stderr.txt
[2025-11-26 21:07:31] HITS file was successfully produced:
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas 923550227 Nov 26 21:05 shared/HITS.pool.root.1
[2025-11-26 21:07:31]  *** Contents of shared directory: ***
[2025-11-26 21:07:31] total 1313404
[2025-11-26 21:07:31] -rw-r--r--. 2 boincer umatlas 409678651 Nov 26 00:12 ATLAS.root_0
[2025-11-26 21:07:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:12 start_atlas.sh
[2025-11-26 21:07:31] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:12 input.tar.gz
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas 923550227 Nov 26 21:05 HITS.pool.root.1
[2025-11-26 21:07:31] -rw-------. 1 boincer umatlas  11069440 Nov 26 21:07 result.tar.gz
21:07:32 (2726210): run_atlas exited; CPU time 253718.719474
21:07:32 (2726210): called boinc_finish(0)

</stderr_txt>
]]>

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