Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:07 (3148082): wrapper (7.7.26015): starting
00:00:07 (3148082): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:07] Arguments: --nthreads 9
[2025-11-26 00:00:07] Threads: 9
[2025-11-26 00:00:07] Checking for CVMFS
[2025-11-26 00:00:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:09] 2.13.2.0 6491 36055 227284 153309 3 430 35632507 40960000 24781 16776704 0 152444216 99.579 155731397 40532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:00:09] CVMFS is ok
[2025-11-26 00:00:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:09] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:09] Checking for apptainer binary...
[2025-11-26 00:00:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:09] Running /usr/bin/apptainer --version
[2025-11-26 00:00:10] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:10] c-212-20.aglt2.org
[2025-11-26 00:00:10] apptainer works
[2025-11-26 00:00:10] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:10] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:10] Starting ATLAS job with PandaID=6895882684
[2025-11-26 00:00:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:49:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:49:21] 2025-11-27 04:48:27,961 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:49:21] 2025-11-27 04:48:27,963 | INFO     | sum of square deviations: 856213231775.5035
[2025-11-26 23:49:21] 2025-11-27 04:48:28,000 | INFO     | sum of deviations: 6727989103247.52
[2025-11-26 23:49:21] 2025-11-27 04:48:28,000 | INFO     | mean x: 1764176088.9094796
[2025-11-26 23:49:21] 2025-11-27 04:48:28,000 | INFO     | mean y: 2984947.5630791164
[2025-11-26 23:49:21] 2025-11-27 04:48:28,000 | INFO     | intersect: -13859633687.493141
[2025-11-26 23:49:21] 2025-11-27 04:48:28,001 | INFO     | chi2: 9.527904058621555
[2025-11-26 23:49:21] 2025-11-27 04:48:28,003 | INFO     | sum of square deviations: 847091505690.5286
[2025-11-26 23:49:21] 2025-11-27 04:48:28,041 | INFO     | sum of deviations: 7168424656094.55
[2025-11-26 23:49:21] 2025-11-27 04:48:28,041 | INFO     | mean x: 1764175936.4198856
[2025-11-26 23:49:21] 2025-11-27 04:48:28,041 | INFO     | mean y: 2992308.6924177394
[2025-11-26 23:49:21] 2025-11-27 04:48:28,041 | INFO     | intersect: -14926164925.63965
[2025-11-26 23:49:21] 2025-11-27 04:48:28,042 | INFO     | chi2: 6.790628261877898
[2025-11-26 23:49:21] 2025-11-27 04:48:28,043 | INFO     | current chi2=6.790628261877898 (change=28.72904449816292 %)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,044 | INFO     | sum of square deviations: 838034633777.9667
[2025-11-26 23:49:21] 2025-11-27 04:48:28,080 | INFO     | sum of deviations: 7183340035110.745
[2025-11-26 23:49:21] 2025-11-27 04:48:28,080 | INFO     | mean x: 1764175783.9289303
[2025-11-26 23:49:21] 2025-11-27 04:48:28,080 | INFO     | mean y: 2992556.9368269923
[2025-11-26 23:49:21] 2025-11-27 04:48:28,081 | INFO     | intersect: -15118905783.397318
[2025-11-26 23:49:21] 2025-11-27 04:48:28,082 | INFO     | chi2: 6.62320076242225
[2025-11-26 23:49:21] 2025-11-27 04:48:28,082 | INFO     | current chi2=6.62320076242225 (change=2.4655671463504123 %)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,082 | INFO     | right removable region: 1392
[2025-11-26 23:49:21] 2025-11-27 04:48:28,083 | INFO     | sum of square deviations: 847089015670.53
[2025-11-26 23:49:21] 2025-11-27 04:48:28,117 | INFO     | sum of deviations: 6175967904993.037
[2025-11-26 23:49:21] 2025-11-27 04:48:28,118 | INFO     | mean x: 1764176241.4198856
[2025-11-26 23:49:21] 2025-11-27 04:48:28,118 | INFO     | mean y: 2994172.5314735337
[2025-11-26 23:49:21] 2025-11-27 04:48:28,118 | INFO     | intersect: -12859285522.048105
[2025-11-26 23:49:21] 2025-11-27 04:48:28,119 | INFO     | chi2: 5.837611904270421
[2025-11-26 23:49:21] 2025-11-27 04:48:28,119 | INFO     | current chi2=5.837611904270421 (change=38.7314159719302 %)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,120 | INFO     | sum of square deviations: 838029824040.2458
[2025-11-26 23:49:21] 2025-11-27 04:48:28,155 | INFO     | sum of deviations: 5736449424301.5625
[2025-11-26 23:49:21] 2025-11-27 04:48:28,155 | INFO     | mean x: 1764176393.930366
[2025-11-26 23:49:21] 2025-11-27 04:48:28,155 | INFO     | mean y: 3001568.9748743717
[2025-11-26 23:49:21] 2025-11-27 04:48:28,155 | INFO     | intersect: -12073070629.193388
[2025-11-26 23:49:21] 2025-11-27 04:48:28,156 | INFO     | chi2: 3.608783774956193
[2025-11-26 23:49:21] 2025-11-27 04:48:28,157 | INFO     | current chi2=3.608783774956193 (change=38.18047800820334 %)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,158 | INFO     | sum of square deviations: 829036103269.1646
[2025-11-26 23:49:21] 2025-11-27 04:48:28,193 | INFO     | sum of deviations: 5555492687555.578
[2025-11-26 23:49:21] 2025-11-27 04:48:28,193 | INFO     | mean x: 1764176546.4351585
[2025-11-26 23:49:21] 2025-11-27 04:48:28,193 | INFO     | mean y: 3004635.1397694526
[2025-11-26 23:49:21] 2025-11-27 04:48:28,194 | INFO     | intersect: -11819001505.038559
[2025-11-26 23:49:21] 2025-11-27 04:48:28,195 | INFO     | chi2: 3.28230621767139
[2025-11-26 23:49:21] 2025-11-27 04:48:28,195 | INFO     | current chi2=3.28230621767139 (change=9.046747537229935 %)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,195 | INFO     | left removable region: 30
[2025-11-26 23:49:21] 2025-11-27 04:48:28,196 | INFO     | sum of square deviations: 783310190223.105
[2025-11-26 23:49:21] 2025-11-27 04:48:28,230 | INFO     | sum of deviations: 5693591153070.455
[2025-11-26 23:49:21] 2025-11-27 04:48:28,230 | INFO     | mean x: 1764176668.4500735
[2025-11-26 23:49:21] 2025-11-27 04:48:28,230 | INFO     | mean y: 3017713.403817915
[2025-11-26 23:49:21] 2025-11-27 04:48:28,230 | INFO     | intersect: -12820127953.933588
[2025-11-26 23:49:21] 2025-11-27 04:48:28,232 | INFO     | chi2: 0.2593424249219638
[2025-11-26 23:49:21] 2025-11-27 04:48:28,232 | INFO     | current memory leak: 7.27 B/s (using 1362 data points, chi2=0.26)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | could have reported an average CPU frequency of 3200 MHz (50 samples)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | ..............................
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . Timing measurements:
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . get job = 0 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . initial setup = 4 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . payload setup = 29 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . stage-in = 0 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . payload execution = 85577 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,233 | INFO     | . stage-out = 4 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,234 | INFO     | . log creation = 0 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,234 | INFO     | ..............................
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | 
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | job summary report
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | --------------------------------------------------
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | PanDA job id: 6895882684
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | task id: 47556149
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | errors: (none)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | pilot state: finished 
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | transexitcode: 0
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | exeerrorcode: 0
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | exeerrordiag: 
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | exitcode: 0
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | exitmsg: OK
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | cpuconsumptiontime: 199343 s
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | nevents: 1000
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | neventsw: 0
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | pid: 3158817
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | pgrp: 3158817
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | corecount: 9
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | event service: False
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | sizes: {0: 2284315, 11: 2284315, 15: 2284605, 22: 2284633, 85610: 2348985, 85615: 2357979, 85617: 2358163, 85628: 2358409}
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | --------------------------------------------------
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | 
[2025-11-26 23:49:21] 2025-11-27 04:48:28,321 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 23:49:21] 2025-11-27 04:48:28,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:49:21] 2025-11-27 04:48:28,399 | INFO     | job 6895882684 has completed (purged errors)
[2025-11-26 23:49:21] 2025-11-27 04:48:28,399 | INFO     | overall cleanup function is called
[2025-11-26 23:49:21] 2025-11-27 04:48:29,039 | INFO     | PID=3152078 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 23:49:21] 2025-11-27 04:48:29,039 | INFO     | .. there are 26 such processes running
[2025-11-26 23:49:21] 2025-11-27 04:48:29,416 | INFO     | --- collectZombieJob: --- 10, [3158817]
[2025-11-26 23:49:21] 2025-11-27 04:48:29,418 | INFO     | zombie collector waiting for pid 3158817
[2025-11-26 23:49:21] 2025-11-27 04:48:29,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:49:21] 2025-11-27 04:48:29,418 | INFO     | collected zombie processes
[2025-11-26 23:49:21] 2025-11-27 04:48:29,418 | INFO     | will attempt to kill all subprocesses of pid=3158817
[2025-11-26 23:49:21] 2025-11-27 04:48:30,118 | INFO     | process IDs to be killed: [3158817] (in reverse order)
[2025-11-26 23:49:21] 2025-11-27 04:48:30,267 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:49:21] 2025-11-27 04:48:30,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:49:21] 2025-11-27 04:48:30,303 | INFO     | did not find any defunct processes belonging to 3158817
[2025-11-26 23:49:21] 2025-11-27 04:48:30,320 | INFO     | did not find any defunct processes belonging to 3158817
[2025-11-26 23:49:21] 2025-11-27 04:48:30,322 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:49:21] 2025-11-27 04:48:30,322 | INFO     | ready for new job
[2025-11-26 23:49:21] 2025-11-27 04:48:30,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:49:21] 2025-11-27 04:48:30,328 | INFO     | ***************************************
[2025-11-26 23:49:21] 2025-11-27 04:48:30,328 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:49:21] 2025-11-27 04:48:30,328 | INFO     | ***************************************
[2025-11-26 23:49:21] 2025-11-27 04:48:30,329 | INFO     | 
[2025-11-26 23:49:21] 2025-11-27 04:48:30,334 | INFO     | architecture information:
[2025-11-26 23:49:21] 2025-11-27 04:48:30,334 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:49:21] 2025-11-27 04:48:30,380 | INFO     | cat /etc/os-release:
[2025-11-26 23:49:21] NAME="CentOS Linux"
[2025-11-26 23:49:21] VERSION="7 (Core)"
[2025-11-26 23:49:21] ID="centos"
[2025-11-26 23:49:21] ID_LIKE="rhel fedora"
[2025-11-26 23:49:21] VERSION_ID="7"
[2025-11-26 23:49:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:49:21] ANSI_COLOR="0;31"
[2025-11-26 23:49:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:49:21] HOME_URL="https://www.centos.org/"
[2025-11-26 23:49:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:49:21] 
[2025-11-26 23:49:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:49:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:49:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:49:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:49:21] 
[2025-11-26 23:49:21] 2025-11-27 04:48:30,381 | INFO     | ***************************************
[2025-11-26 23:49:21] 2025-11-27 04:48:30,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 23:49:21] 2025-11-27 04:48:30,917 | INFO     | sufficient remaining disk space (122815512576 B)
[2025-11-26 23:49:21] 2025-11-27 04:48:30,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:49:21] 2025-11-27 04:48:30,918 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:49:21] 2025-11-27 04:48:30,918 | INFO     | update_server=False
[2025-11-26 23:49:21] 2025-11-27 04:48:30,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:49:21] 2025-11-27 04:48:30,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:49:21] 2025-11-27 04:48:30,924 | INFO     | aborting loop
[2025-11-26 23:49:21] 2025-11-27 04:48:30,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:49:21] 2025-11-27 04:48:31,172 | INFO     | all data control threads have been joined
[2025-11-26 23:49:21] 2025-11-27 04:48:31,728 | INFO     | all payload control threads have been joined
[2025-11-26 23:49:21] 2025-11-27 04:48:31,924 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:31,932 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,102 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,178 | INFO     | [data] control thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,180 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,235 | INFO     | all job control threads have been joined
[2025-11-26 23:49:21] 2025-11-27 04:48:32,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:49:21] 2025-11-27 04:48:32,429 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,466 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,519 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,734 | INFO     | [payload] control thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,820 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:32,934 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:33,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:33,241 | INFO     | [job] control thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:33,291 | INFO     | [job] validate thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:33,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:49:21] 2025-11-27 04:48:34,336 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:48:36,395 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:49:21] 2025-11-27 04:49:01,656 | INFO     | PID=3152078 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:49:21] 2025-11-27 04:49:01,656 | INFO     | .. there are 26 such processes running
[2025-11-26 23:49:21] 2025-11-27 04:49:01,656 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:49:21] 2025-11-27 04:49:01,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:49:21] 2025-11-27 04:49:01,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:49:21] 2025-11-27 04:49:14,899 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:49:21] 2025-11-27 04:49:15,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665153083200)>', '<ExcThread(monitor, started 140664633272064)>']
[2025-11-26 23:49:21] 2025-11-27 04:49:15,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:49:21] 2025-11-27 04:49:15,740 | INFO     | [monitor] control thread has ended
[2025-11-26 23:49:21] 2025-11-27 04:49:20,597 | INFO     | all workflow threads have been joined
[2025-11-26 23:49:21] 2025-11-27 04:49:20,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:49:21] 2025-11-27 04:49:20,597 | INFO     | traces error code: 0
[2025-11-26 23:49:21] 2025-11-27 04:49:20,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:49:21] 2025-11-27 04:49:20,815 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:49:21] 2025-11-27 04:49:20,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:49:21] 2025-11-27 04:49:20,829 [wrapper] pilotpid: 3152078
[2025-11-26 23:49:21] 2025-11-27 04:49:20,833 [wrapper] Pilot exit status: 0
[2025-11-26 23:49:21] 2025-11-27 04:49:20,852 [wrapper] pandaids: 6895882684
[2025-11-26 23:49:21] 2025-11-27 04:49:21,011 [wrapper] cleanup supervisor_pilot 1676644 3152079
[2025-11-26 23:49:21] 2025-11-27 04:49:21,016 [wrapper] Test setup, not cleaning
[2025-11-26 23:49:21] 2025-11-27 04:49:21,020 [wrapper] apfmon messages muted
[2025-11-26 23:49:21] 2025-11-27 04:49:21,029 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:49:21] 2025-11-27 04:49:21,037 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:49:21]  *** Error codes and diagnostics ***
[2025-11-26 23:49:21]     "exeErrorCode": 0,
[2025-11-26 23:49:21]     "exeErrorDiag": "",
[2025-11-26 23:49:21]     "pilotErrorCode": 0,
[2025-11-26 23:49:21]     "pilotErrorDiag": "",
[2025-11-26 23:49:21]  *** Listing of results directory ***
[2025-11-26 23:49:21] total 1323684
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 11:06 pilot3.tar.gz
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 11:37 queuedata.json
[2025-11-26 23:49:21] -rwx------. 1 boincer umatlas     36292 Nov 24 11:39 runpilot2-wrapper.sh
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:49:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-26 23:49:21] -rw-r--r--. 2 boincer umatlas 408286891 Nov 26 00:00 EVNT.47483658._001386.pool.root.1
[2025-11-26 23:49:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 23:49:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-26 23:49:21] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 00:00 input.tar.gz
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:00 pandaJob.out
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas    991877 Nov 26 00:00 agis_schedconf.cvmfs.json
[2025-11-26 23:49:21] drwx------. 5 boincer umatlas      4096 Nov 26 00:00 pilot3
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas       533 Nov 26 23:40 boinc_task_state.xml
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas      6948 Nov 26 23:45 init_data.xml
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas 917062862 Nov 26 23:47 HITS.47556149._003730.pool.root.1
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas      1063 Nov 26 23:48 memory_monitor_summary.json
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas   2531064 Nov 26 23:48 log.47556149._003730.job.log.tgz.1
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas        95 Nov 26 23:48 pilot_heartbeat.json
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas      8606 Nov 26 23:48 heartbeat.json
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:49 boinc_mmap_file
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:49 wrapper_checkpoint.txt
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas      4825 Nov 26 23:49 pilotlog.txt
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas  10560229 Nov 26 23:49 log.47556149._003730.job.log.1
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas       353 Nov 26 23:49 output.list
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:49 runtime_log
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas  13107200 Nov 26 23:49 result.tar.gz
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 23:49 runtime_log.err
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas       665 Nov 26 23:49 1aPODmZmoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3lLKDm7OuzPm.diag
[2025-11-26 23:49:21] -rw-r--r--. 1 boincer umatlas     21237 Nov 26 23:49 stderr.txt
[2025-11-26 23:49:21] HITS file was successfully produced:
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas 917062862 Nov 26 23:47 shared/HITS.pool.root.1
[2025-11-26 23:49:21]  *** Contents of shared directory: ***
[2025-11-26 23:49:21] total 1307696
[2025-11-26 23:49:21] -rw-r--r--. 2 boincer umatlas 408286891 Nov 26 00:00 ATLAS.root_0
[2025-11-26 23:49:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 23:49:21] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 00:00 input.tar.gz
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas 917062862 Nov 26 23:47 HITS.pool.root.1
[2025-11-26 23:49:21] -rw-------. 1 boincer umatlas  13107200 Nov 26 23:49 result.tar.gz
23:49:23 (3148082): run_atlas exited; CPU time 200783.392922
23:49:23 (3148082): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN