Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:30 (3285668): wrapper (7.7.26015): starting
00:04:30 (3285668): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:30] Arguments: --nthreads 9
[2025-11-26 00:04:30] Threads: 9
[2025-11-26 00:04:30] Checking for CVMFS
[2025-11-26 00:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:31] 2.13.2.0 6969 36268 242948 153309 0 543 32015462 40960000 23699 16776704 0 104105581 99.616 94197801 35788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:04:31] CVMFS is ok
[2025-11-26 00:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:31] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:31] Checking for apptainer binary...
[2025-11-26 00:04:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:31] Running /usr/bin/apptainer --version
[2025-11-26 00:04:31] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:31] c-212-14.aglt2.org
[2025-11-26 00:04:31] apptainer works
[2025-11-26 00:04:31] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:31] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:32] Starting ATLAS job with PandaID=6896714621
[2025-11-26 00:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:09:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:09:21] 2025-11-27 18:08:40,732 | INFO     | time since job start (133413s) is within the limit (172800.0s)
[2025-11-27 13:09:21] 2025-11-27 18:08:41,809 | INFO     | monitor loop #7964: job 0:6896714621 is in state 'finished'
[2025-11-27 13:09:21] 2025-11-27 18:08:41,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:09:21] 2025-11-27 18:08:42,739 | INFO     | time since job start (133415s) is within the limit (172800.0s)
[2025-11-27 13:09:21] 2025-11-27 18:08:44,314 | INFO     | monitor loop #7965: job 0:6896714621 is in state 'finished'
[2025-11-27 13:09:21] 2025-11-27 18:08:44,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:09:21] 2025-11-27 18:08:44,746 | INFO     | time since job start (133417s) is within the limit (172800.0s)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,171 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:09:21] 2025-11-27 18:08:46,177 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3083.2948020833333
[2025-11-27 13:09:21] 2025-11-27 18:08:46,200 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6896714621/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,200 | INFO     | extracted standard info from prmon json
[2025-11-27 13:09:21] 2025-11-27 18:08:46,200 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:09:21] 2025-11-27 18:08:46,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:09:21] 2025-11-27 18:08:46,238 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:09:21] 2025-11-27 18:08:46,241 | INFO     | sum of square deviations: 3239143401773.1104
[2025-11-27 13:09:21] 2025-11-27 18:08:46,416 | INFO     | sum of deviations: 18561496967468.39
[2025-11-27 13:09:21] 2025-11-27 18:08:46,416 | INFO     | mean x: 1764200213.247484
[2025-11-27 13:09:21] 2025-11-27 18:08:46,416 | INFO     | mean y: 3003870.1120768525
[2025-11-27 13:09:21] 2025-11-27 18:08:46,416 | INFO     | intersect: -10106519805.27536
[2025-11-27 13:09:21] 2025-11-27 18:08:46,418 | INFO     | chi2: 11.72175261235132
[2025-11-27 13:09:21] 2025-11-27 18:08:46,424 | INFO     | sum of square deviations: 3216968923165.305
[2025-11-27 13:09:21] 2025-11-27 18:08:46,593 | INFO     | sum of deviations: 19267288551777.8
[2025-11-27 13:09:21] 2025-11-27 18:08:46,593 | INFO     | mean x: 1764200060.75149
[2025-11-27 13:09:21] 2025-11-27 18:08:46,593 | INFO     | mean y: 3008723.3704722603
[2025-11-27 13:09:21] 2025-11-27 18:08:46,593 | INFO     | intersect: -10563257984.64529
[2025-11-27 13:09:21] 2025-11-27 18:08:46,595 | INFO     | chi2: 8.863344475011091
[2025-11-27 13:09:21] 2025-11-27 18:08:46,595 | INFO     | current chi2=8.863344475011091 (change=24.38550131426846 %)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,595 | INFO     | right removable region: 2180
[2025-11-27 13:09:21] 2025-11-27 18:08:46,597 | INFO     | sum of square deviations: 3216966592965.3096
[2025-11-27 13:09:21] 2025-11-27 18:08:46,699 | INFO     | sum of deviations: 17719425096051.25
[2025-11-27 13:09:21] 2025-11-27 18:08:46,700 | INFO     | mean x: 1764200365.75149
[2025-11-27 13:09:21] 2025-11-27 18:08:46,700 | INFO     | mean y: 3009660.081613939
[2025-11-27 13:09:21] 2025-11-27 18:08:46,700 | INFO     | intersect: -9714410565.455944
[2025-11-27 13:09:21] 2025-11-27 18:08:46,702 | INFO     | chi2: 8.311638242528327
[2025-11-27 13:09:21] 2025-11-27 18:08:46,702 | INFO     | current chi2=8.311638242528327 (change=29.092188536974618 %)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,704 | INFO     | sum of square deviations: 3194891227919.9336
[2025-11-27 13:09:21] 2025-11-27 18:08:46,758 | INFO     | time since job start (133419s) is within the limit (172800.0s)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,831 | INFO     | monitor loop #7966: job 0:6896714621 is in state 'finished'
[2025-11-27 13:09:21] 2025-11-27 18:08:46,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,860 | INFO     | sum of deviations: 17051532815598.832
[2025-11-27 13:09:21] 2025-11-27 18:08:46,861 | INFO     | mean x: 1764200518.2555146
[2025-11-27 13:09:21] 2025-11-27 18:08:46,861 | INFO     | mean y: 3014273.388786765
[2025-11-27 13:09:21] 2025-11-27 18:08:46,861 | INFO     | intersect: -9412743849.280003
[2025-11-27 13:09:21] 2025-11-27 18:08:46,862 | INFO     | chi2: 6.3343308551277815
[2025-11-27 13:09:21] 2025-11-27 18:08:46,863 | INFO     | current chi2=6.3343308551277815 (change=23.789622812061488 %)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,863 | INFO     | left removable region: 20
[2025-11-27 13:09:21] 2025-11-27 18:08:46,864 | INFO     | sum of square deviations: 3124931981407.9326
[2025-11-27 13:09:21] 2025-11-27 18:08:46,944 | INFO     | sum of deviations: 16935198219344.297
[2025-11-27 13:09:21] 2025-11-27 18:08:46,944 | INFO     | mean x: 1764200640.2662036
[2025-11-27 13:09:21] 2025-11-27 18:08:46,944 | INFO     | mean y: 3025556.9125
[2025-11-27 13:09:21] 2025-11-27 18:08:46,944 | INFO     | intersect: -9557850557.946552
[2025-11-27 13:09:21] 2025-11-27 18:08:46,946 | INFO     | chi2: 1.7082543398964807
[2025-11-27 13:09:21] 2025-11-27 18:08:46,946 | INFO     | current memory leak: 5.42 B/s (using 2160 data points, chi2=1.71)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,948 | INFO     | could have reported an average CPU frequency of 3050 MHz (76 samples)
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | ..............................
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . Timing measurements:
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . get job = 0 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . initial setup = 3 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . payload setup = 15 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . stage-in = 0 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . payload execution = 133344 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . stage-out = 5 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | . log creation = 1 s
[2025-11-27 13:09:21] 2025-11-27 18:08:46,949 | INFO     | ..............................
[2025-11-27 13:09:21] 2025-11-27 18:08:47,060 | INFO     | 
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | job summary report
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | --------------------------------------------------
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | PanDA job id: 6896714621
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | task id: 47556161
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | errors: (none)
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | pilot state: finished 
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | transexitcode: 0
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | exeerrorcode: 0
[2025-11-27 13:09:21] 2025-11-27 18:08:47,062 | INFO     | exeerrordiag: 
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | exitcode: 0
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | exitmsg: OK
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | cpuconsumptiontime: 223362 s
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | nevents: 1000
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | neventsw: 0
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | pid: 3335130
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | pgrp: 3335130
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | corecount: 9
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | event service: False
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | sizes: {0: 2284037, 1: 2284292, 12: 2284292, 17: 2284582, 22: 2284610, 133364: 2372094, 133371: 2381088, 133372: 2381144, 133384: 2381390}
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | --------------------------------------------------
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | 
[2025-11-27 13:09:21] 2025-11-27 18:08:47,063 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 13:09:21] 2025-11-27 18:08:47,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | job 6896714621 has completed (purged errors)
[2025-11-27 13:09:21] 2025-11-27 18:08:47,126 | INFO     | overall cleanup function is called
[2025-11-27 13:09:21] 2025-11-27 18:08:48,150 | INFO     | --- collectZombieJob: --- 10, [3335130]
[2025-11-27 13:09:21] 2025-11-27 18:08:48,151 | INFO     | zombie collector waiting for pid 3335130
[2025-11-27 13:09:21] 2025-11-27 18:08:48,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:09:21] 2025-11-27 18:08:48,154 | INFO     | collected zombie processes
[2025-11-27 13:09:21] 2025-11-27 18:08:48,154 | INFO     | will attempt to kill all subprocesses of pid=3335130
[2025-11-27 13:09:21] 2025-11-27 18:08:48,714 | INFO     | process IDs to be killed: [3335130] (in reverse order)
[2025-11-27 13:09:21] 2025-11-27 18:08:48,934 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:09:21] 2025-11-27 18:08:48,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:09:21] 2025-11-27 18:08:49,034 | INFO     | did not find any defunct processes belonging to 3335130
[2025-11-27 13:09:21] 2025-11-27 18:08:49,105 | INFO     | did not find any defunct processes belonging to 3335130
[2025-11-27 13:09:21] 2025-11-27 18:08:49,115 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:09:21] 2025-11-27 18:08:49,115 | INFO     | ready for new job
[2025-11-27 13:09:21] 2025-11-27 18:08:49,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:09:21] 2025-11-27 18:08:49,166 | INFO     | ***************************************
[2025-11-27 13:09:21] 2025-11-27 18:08:49,166 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:09:21] 2025-11-27 18:08:49,166 | INFO     | ***************************************
[2025-11-27 13:09:21] 2025-11-27 18:08:49,166 | INFO     | 
[2025-11-27 13:09:21] 2025-11-27 18:08:49,176 | INFO     | architecture information:
[2025-11-27 13:09:21] 2025-11-27 18:08:49,181 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:09:21] 2025-11-27 18:08:49,221 | INFO     | cat /etc/os-release:
[2025-11-27 13:09:21] NAME="CentOS Linux"
[2025-11-27 13:09:21] VERSION="7 (Core)"
[2025-11-27 13:09:21] ID="centos"
[2025-11-27 13:09:21] ID_LIKE="rhel fedora"
[2025-11-27 13:09:21] VERSION_ID="7"
[2025-11-27 13:09:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:09:21] ANSI_COLOR="0;31"
[2025-11-27 13:09:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:09:21] HOME_URL="https://www.centos.org/"
[2025-11-27 13:09:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:09:21] 
[2025-11-27 13:09:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:09:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:09:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:09:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:09:21] 
[2025-11-27 13:09:21] 2025-11-27 18:08:49,221 | INFO     | ***************************************
[2025-11-27 13:09:21] 2025-11-27 18:08:49,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 13:09:21] 2025-11-27 18:08:49,762 | INFO     | sufficient remaining disk space (121682001920 B)
[2025-11-27 13:09:21] 2025-11-27 18:08:49,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:09:21] 2025-11-27 18:08:49,763 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:09:21] 2025-11-27 18:08:49,763 | INFO     | update_server=False
[2025-11-27 13:09:21] 2025-11-27 18:08:49,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:09:21] 2025-11-27 18:08:49,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:09:21] 2025-11-27 18:08:49,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:09:21] 2025-11-27 18:08:50,151 | INFO     | all job control threads have been joined
[2025-11-27 13:09:21] 2025-11-27 18:08:50,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:09:21] 2025-11-27 18:08:50,340 | INFO     | aborting loop
[2025-11-27 13:09:21] 2025-11-27 18:08:50,353 | INFO     | all data control threads have been joined
[2025-11-27 13:09:21] 2025-11-27 18:08:50,780 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:50,860 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:50,889 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:50,892 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,087 | INFO     | [job] validate thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,152 | INFO     | all payload control threads have been joined
[2025-11-27 13:09:21] 2025-11-27 18:08:51,164 | INFO     | [job] control thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,189 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,267 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,275 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,345 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,375 | INFO     | [data] control thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,483 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:51,770 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:52,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:09:21] 2025-11-27 18:08:52,159 | INFO     | [payload] control thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:53,091 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:08:53,776 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:09:21] 2025-11-27 18:09:04,109 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:09:21] 2025-11-27 18:09:05,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753291007808)>', '<ExcThread(monitor, started 139753018070784)>']
[2025-11-27 13:09:21] 2025-11-27 18:09:10,556 | INFO     | all workflow threads have been joined
[2025-11-27 13:09:21] 2025-11-27 18:09:10,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:09:21] 2025-11-27 18:09:10,557 | INFO     | traces error code: 0
[2025-11-27 13:09:21] 2025-11-27 18:09:10,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:09:21] 2025-11-27 18:09:20,321 | INFO     | PID=3299957 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:09:21] 2025-11-27 18:09:20,321 | INFO     | .. there are 25 such processes running
[2025-11-27 13:09:21] 2025-11-27 18:09:20,321 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:09:21] 2025-11-27 18:09:20,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:09:21] 2025-11-27 18:09:20,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:09:21] 2025-11-27 18:09:20,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:09:21] 2025-11-27 18:09:20,322 | INFO     | [monitor] control thread has ended
[2025-11-27 13:09:21] 2025-11-27 18:09:20,686 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:09:21] 2025-11-27 18:09:20,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:09:21] 2025-11-27 18:09:20,737 [wrapper] pilotpid: 3299957
[2025-11-27 13:09:21] 2025-11-27 18:09:20,771 [wrapper] Pilot exit status: 0
[2025-11-27 13:09:21] 2025-11-27 18:09:20,830 [wrapper] pandaids: 6896714621
[2025-11-27 13:09:21] 2025-11-27 18:09:20,982 [wrapper] cleanup supervisor_pilot 2278810 3299958
[2025-11-27 13:09:21] 2025-11-27 18:09:21,002 [wrapper] Test setup, not cleaning
[2025-11-27 13:09:21] 2025-11-27 18:09:21,009 [wrapper] apfmon messages muted
[2025-11-27 13:09:21] 2025-11-27 18:09:21,018 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:09:21] 2025-11-27 18:09:21,022 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:09:21]  *** Error codes and diagnostics ***
[2025-11-27 13:09:21]     "exeErrorCode": 0,
[2025-11-27 13:09:21]     "exeErrorDiag": "",
[2025-11-27 13:09:21]     "pilotErrorCode": 0,
[2025-11-27 13:09:21]     "pilotErrorDiag": "",
[2025-11-27 13:09:21]  *** Listing of results directory ***
[2025-11-27 13:09:21] total 1354764
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:41 queuedata.json
[2025-11-27 13:09:21] -rwx------. 1 boincer umatlas     36292 Nov 25 01:43 runpilot2-wrapper.sh
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:09:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-27 13:09:21] -rw-r--r--. 2 boincer umatlas 411664993 Nov 26 00:04 EVNT.47483658._002125.pool.root.1
[2025-11-27 13:09:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-27 13:09:21] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 00:04 input.tar.gz
[2025-11-27 13:09:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:04 pandaJob.out
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-27 13:09:21] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas       534 Nov 27 13:01 boinc_task_state.xml
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas      6950 Nov 27 13:04 init_data.xml
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas 931832219 Nov 27 13:07 HITS.47556161._001084.pool.root.1
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas        95 Nov 27 13:08 pilot_heartbeat.json
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas      1064 Nov 27 13:08 memory_monitor_summary.json
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:08 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas   3118842 Nov 27 13:08 log.47556161._001084.job.log.tgz.1
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas      8611 Nov 27 13:08 heartbeat.json
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:09 boinc_mmap_file
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas        30 Nov 27 13:09 wrapper_checkpoint.txt
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas       823 Nov 27 13:09 pilotlog.txt
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas  16812790 Nov 27 13:09 log.47556161._001084.job.log.1
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas       353 Nov 27 13:09 output.list
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:09 runtime_log
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas  19947520 Nov 27 13:09 result.tar.gz
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas       668 Nov 27 13:09 YUMLDm6w1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSDMKDmMqghyn.diag
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 13:09 runtime_log.err
[2025-11-27 13:09:21] -rw-r--r--. 1 boincer umatlas     21572 Nov 27 13:09 stderr.txt
[2025-11-27 13:09:21] HITS file was successfully produced:
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas 931832219 Nov 27 13:07 shared/HITS.pool.root.1
[2025-11-27 13:09:21]  *** Contents of shared directory: ***
[2025-11-27 13:09:21] total 1332100
[2025-11-27 13:09:21] -rw-r--r--. 2 boincer umatlas 411664993 Nov 26 00:04 ATLAS.root_0
[2025-11-27 13:09:21] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 00:04 input.tar.gz
[2025-11-27 13:09:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas 931832219 Nov 27 13:07 HITS.pool.root.1
[2025-11-27 13:09:21] -rw-------. 1 boincer umatlas  19947520 Nov 27 13:09 result.tar.gz
13:09:22 (3285668): run_atlas exited; CPU time 225263.631282
13:09:22 (3285668): called boinc_finish(0)

</stderr_txt>
]]>

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