Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:38 (944535): wrapper (7.7.26015): starting
00:00:38 (944535): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:38] Arguments: --nthreads 9
[2025-11-26 00:00:38] Threads: 9
[2025-11-26 00:00:38] Checking for CVMFS
[2025-11-26 00:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:40] 2.13.3.0 12348 29603 373024 153309 1 349 18796940 32935936 37789 16776704 0 147302187 99.487 189545002 35505 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:00:40] CVMFS is ok
[2025-11-26 00:00:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:40] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:40] Checking for apptainer binary...
[2025-11-26 00:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:40] Running /usr/bin/apptainer --version
[2025-11-26 00:00:40] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:41] c6-12-27-2.aglt2.org
[2025-11-26 00:00:41] apptainer works
[2025-11-26 00:00:41] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:41] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:41] Starting ATLAS job with PandaID=6896714629
[2025-11-26 00:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:54:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:54:02] 2025-11-27 03:44:37,416 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:54:02] 2025-11-27 03:44:37,418 | INFO     | sum of square deviations: 742738145479.6843
[2025-11-26 22:54:02] 2025-11-27 03:44:37,452 | INFO     | sum of deviations: 4499377654855.602
[2025-11-26 22:54:02] 2025-11-27 03:44:37,452 | INFO     | mean x: 1764174261.7234678
[2025-11-26 22:54:02] 2025-11-27 03:44:37,452 | INFO     | mean y: 3013801.4394618836
[2025-11-26 22:54:02] 2025-11-27 03:44:37,452 | INFO     | intersect: -10684045023.772125
[2025-11-26 22:54:02] 2025-11-27 03:44:37,454 | INFO     | chi2: 16.713956622420213
[2025-11-26 22:54:02] 2025-11-27 03:44:37,456 | INFO     | sum of square deviations: 734443668140.0352
[2025-11-26 22:54:02] 2025-11-27 03:44:37,488 | INFO     | sum of deviations: 4989161865015.059
[2025-11-26 22:54:02] 2025-11-27 03:44:37,490 | INFO     | mean x: 1764174109.235559
[2025-11-26 22:54:02] 2025-11-27 03:44:37,491 | INFO     | mean y: 3022805.9774943735
[2025-11-26 22:54:02] 2025-11-27 03:44:37,491 | INFO     | intersect: -11981218560.464167
[2025-11-26 22:54:02] 2025-11-27 03:44:37,492 | INFO     | chi2: 13.383208039259106
[2025-11-26 22:54:02] 2025-11-27 03:44:37,492 | INFO     | current chi2=13.383208039259106 (change=19.927947992237925 %)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,493 | INFO     | right removable region: 1332
[2025-11-26 22:54:02] 2025-11-27 03:44:37,494 | INFO     | sum of square deviations: 734441037210.0347
[2025-11-26 22:54:02] 2025-11-27 03:44:37,528 | INFO     | sum of deviations: 3922204464729.642
[2025-11-26 22:54:02] 2025-11-27 03:44:37,528 | INFO     | mean x: 1764174414.235559
[2025-11-26 22:54:02] 2025-11-27 03:44:37,528 | INFO     | mean y: 3024409.539384846
[2025-11-26 22:54:02] 2025-11-27 03:44:37,528 | INFO     | intersect: -9418361942.129978
[2025-11-26 22:54:02] 2025-11-27 03:44:37,530 | INFO     | chi2: 12.187250881102045
[2025-11-26 22:54:02] 2025-11-27 03:44:37,530 | INFO     | current chi2=12.187250881102045 (change=27.083388114373914 %)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,532 | INFO     | sum of square deviations: 726206011664.9882
[2025-11-26 22:54:02] 2025-11-27 03:44:37,566 | INFO     | sum of deviations: 3395977796237.6685
[2025-11-26 22:54:02] 2025-11-27 03:44:37,566 | INFO     | mean x: 1764174566.746988
[2025-11-26 22:54:02] 2025-11-27 03:44:37,567 | INFO     | mean y: 3034156.0436746986
[2025-11-26 22:54:02] 2025-11-27 03:44:37,567 | INFO     | intersect: -8246825472.11344
[2025-11-26 22:54:02] 2025-11-27 03:44:37,568 | INFO     | chi2: 8.537221957198206
[2025-11-26 22:54:02] 2025-11-27 03:44:37,569 | INFO     | current chi2=8.537221957198206 (change=29.94956745793832 %)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,570 | INFO     | sum of square deviations: 718032754353.5922
[2025-11-26 22:54:02] 2025-11-27 03:44:37,624 | INFO     | sum of deviations: 2937265547635.867
[2025-11-26 22:54:02] 2025-11-27 03:44:37,624 | INFO     | mean x: 1764174719.2585034
[2025-11-26 22:54:02] 2025-11-27 03:44:37,624 | INFO     | mean y: 3042713.167044596
[2025-11-26 22:54:02] 2025-11-27 03:44:37,624 | INFO     | intersect: -7213688823.757245
[2025-11-26 22:54:02] 2025-11-27 03:44:37,626 | INFO     | chi2: 5.823965589385349
[2025-11-26 22:54:02] 2025-11-27 03:44:37,626 | INFO     | current chi2=5.823965589385349 (change=31.781490295272924 %)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,627 | INFO     | sum of square deviations: 709921919441.1926
[2025-11-26 22:54:02] 2025-11-27 03:44:37,658 | INFO     | sum of deviations: 2718283109685.842
[2025-11-26 22:54:02] 2025-11-27 03:44:37,658 | INFO     | mean x: 1764174871.7617602
[2025-11-26 22:54:02] 2025-11-27 03:44:37,658 | INFO     | mean y: 3046826.6714719273
[2025-11-26 22:54:02] 2025-11-27 03:44:37,659 | INFO     | intersect: -6751959076.255044
[2025-11-26 22:54:02] 2025-11-27 03:44:37,660 | INFO     | chi2: 5.162659214009873
[2025-11-26 22:54:02] 2025-11-27 03:44:37,660 | INFO     | current chi2=5.162659214009873 (change=11.35491556785227 %)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,660 | INFO     | left removable region: 40
[2025-11-26 22:54:02] 2025-11-27 03:44:37,661 | INFO     | sum of square deviations: 668729719432.2736
[2025-11-26 22:54:02] 2025-11-27 03:44:37,691 | INFO     | sum of deviations: 2929291503362.587
[2025-11-26 22:54:02] 2025-11-27 03:44:37,692 | INFO     | mean x: 1764175298.7979877
[2025-11-26 22:54:02] 2025-11-27 03:44:37,692 | INFO     | mean y: 3065586.5348297213
[2025-11-26 22:54:02] 2025-11-27 03:44:37,692 | INFO     | intersect: -7724695813.98787
[2025-11-26 22:54:02] 2025-11-27 03:44:37,693 | INFO     | chi2: 0.7170524057664198
[2025-11-26 22:54:02] 2025-11-27 03:44:37,693 | INFO     | current memory leak: 4.38 B/s (using 1292 data points, chi2=0.72)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,695 | INFO     | could have reported an average CPU frequency of 2702 MHz (48 samples)
[2025-11-26 22:54:02] 2025-11-27 03:44:37,695 | INFO     | ..............................
[2025-11-26 22:54:02] 2025-11-27 03:44:37,695 | INFO     | . Timing measurements:
[2025-11-26 22:54:02] 2025-11-27 03:44:37,695 | INFO     | . get job = 0 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,695 | INFO     | . initial setup = 6 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,695 | INFO     | . payload setup = 54 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,696 | INFO     | . stage-in = 0 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,696 | INFO     | . payload execution = 81606 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,696 | INFO     | . stage-out = 4 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,696 | INFO     | . log creation = 0 s
[2025-11-26 22:54:02] 2025-11-27 03:44:37,696 | INFO     | ..............................
[2025-11-26 22:54:02] 2025-11-27 03:44:38,002 | INFO     | time since job start (81762s) is within the limit (172800.0s)
[2025-11-26 22:54:02] 2025-11-27 03:44:38,002 | INFO     | 81768s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | 
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | job summary report
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | --------------------------------------------------
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | PanDA job id: 6896714629
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | task id: 47556161
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | errors: (none)
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:54:02] 2025-11-27 03:44:38,279 | INFO     | pilot state: finished 
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | transexitcode: 0
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | exeerrorcode: 0
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | exeerrordiag: 
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | exitcode: 0
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | exitmsg: OK
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | cpuconsumptiontime: 265265 s
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | nevents: 1000
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | neventsw: 0
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | pid: 969275
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | pgrp: 969275
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | corecount: 9
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | event service: False
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | sizes: {0: 2284092, 1: 2284291, 13: 2284291, 24: 2284347, 35: 2284665, 45: 2284665, 81664: 2345817, 81665: 2345816, 81670: 2354866, 81672: 2354922, 81684: 2355168}
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | --------------------------------------------------
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | 
[2025-11-26 22:54:02] 2025-11-27 03:44:38,280 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-26 22:54:02] 2025-11-27 03:44:38,366 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:54:02] 2025-11-27 03:44:38,368 | INFO     | job 6896714629 has completed (purged errors)
[2025-11-26 22:54:02] 2025-11-27 03:44:38,369 | INFO     | overall cleanup function is called
[2025-11-26 22:54:02] 2025-11-27 03:44:39,388 | INFO     | --- collectZombieJob: --- 10, [969275]
[2025-11-26 22:54:02] 2025-11-27 03:44:39,388 | INFO     | zombie collector waiting for pid 969275
[2025-11-26 22:54:02] 2025-11-27 03:44:39,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:54:02] 2025-11-27 03:44:39,388 | INFO     | collected zombie processes
[2025-11-26 22:54:02] 2025-11-27 03:44:39,388 | INFO     | will attempt to kill all subprocesses of pid=969275
[2025-11-26 22:54:02] 2025-11-27 03:44:40,403 | INFO     | process IDs to be killed: [969275] (in reverse order)
[2025-11-26 22:54:02] 2025-11-27 03:44:40,609 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:54:02] 2025-11-27 03:44:40,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:54:02] 2025-11-27 03:44:40,630 | INFO     | did not find any defunct processes belonging to 969275
[2025-11-26 22:54:02] 2025-11-27 03:44:40,650 | INFO     | did not find any defunct processes belonging to 969275
[2025-11-26 22:54:02] 2025-11-27 03:44:40,651 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:54:02] 2025-11-27 03:44:40,651 | INFO     | ready for new job
[2025-11-26 22:54:02] 2025-11-27 03:44:40,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:54:02] 2025-11-27 03:44:40,657 | INFO     | ***************************************
[2025-11-26 22:54:02] 2025-11-27 03:44:40,657 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:54:02] 2025-11-27 03:44:40,657 | INFO     | ***************************************
[2025-11-26 22:54:02] 2025-11-27 03:44:40,657 | INFO     | 
[2025-11-26 22:54:02] 2025-11-27 03:44:40,662 | INFO     | architecture information:
[2025-11-26 22:54:02] 2025-11-27 03:44:40,663 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:54:02] 2025-11-27 03:44:40,706 | INFO     | cat /etc/os-release:
[2025-11-26 22:54:02] NAME="CentOS Linux"
[2025-11-26 22:54:02] VERSION="7 (Core)"
[2025-11-26 22:54:02] ID="centos"
[2025-11-26 22:54:02] ID_LIKE="rhel fedora"
[2025-11-26 22:54:02] VERSION_ID="7"
[2025-11-26 22:54:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:54:02] ANSI_COLOR="0;31"
[2025-11-26 22:54:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:54:02] HOME_URL="https://www.centos.org/"
[2025-11-26 22:54:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:54:02] 
[2025-11-26 22:54:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:54:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:54:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:54:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:54:02] 
[2025-11-26 22:54:02] 2025-11-27 03:44:40,706 | INFO     | ***************************************
[2025-11-26 22:54:02] 2025-11-27 03:44:41,212 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-26 22:54:02] 2025-11-27 03:44:41,233 | INFO     | sufficient remaining disk space (86085992448 B)
[2025-11-26 22:54:02] 2025-11-27 03:44:41,233 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:54:02] 2025-11-27 03:44:41,233 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:54:02] 2025-11-27 03:44:41,233 | INFO     | update_server=False
[2025-11-26 22:54:02] 2025-11-27 03:44:41,233 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:54:02] 2025-11-27 03:44:41,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:54:02] 2025-11-27 03:44:41,693 | INFO     | all payload control threads have been joined
[2025-11-26 22:54:02] 2025-11-27 03:44:41,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:54:02] 2025-11-27 03:44:41,782 | INFO     | all data control threads have been joined
[2025-11-26 22:54:02] 2025-11-27 03:44:42,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:54:02] 2025-11-27 03:44:42,184 | INFO     | aborting loop
[2025-11-26 22:54:02] 2025-11-27 03:44:42,239 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,504 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,686 | INFO     | all job control threads have been joined
[2025-11-26 22:54:02] 2025-11-27 03:44:42,699 | INFO     | [payload] control thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,710 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,716 | INFO     | [job] validate thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,788 | INFO     | [data] control thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:54:02] 2025-11-27 03:44:42,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,950 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:42,974 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:43,190 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:43,692 | INFO     | [job] control thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:43,706 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:43,727 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:43,729 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:43,839 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:44:45,242 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:54:02] 2025-11-27 03:45:11,874 | INFO     | PID=949502 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 22:54:02] 2025-11-27 03:45:11,874 | INFO     | .. there are 47 such processes running
[2025-11-26 22:54:02] 2025-11-27 03:45:11,875 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:54:02] 2025-11-27 03:45:11,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:54:02] 2025-11-27 03:45:11,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:54:02] 2025-11-27 03:45:28,958 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:54:02] 2025-11-27 03:45:29,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037319001920)>', '<ExcThread(monitor, started 140036955674368)>']
[2025-11-26 22:54:02] 2025-11-27 03:45:29,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:54:02] 2025-11-27 03:45:29,991 | INFO     | [monitor] control thread has ended
[2025-11-26 22:54:02] 2025-11-27 03:45:34,802 | INFO     | all workflow threads have been joined
[2025-11-26 22:54:02] 2025-11-27 03:45:34,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:54:02] 2025-11-27 03:45:34,802 | INFO     | traces error code: 0
[2025-11-26 22:54:02] 2025-11-27 03:45:34,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:54:02] 2025-11-27 03:45:34,998 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:54:02] 2025-11-27 03:45:35,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:54:02] 2025-11-27 03:45:35,004 [wrapper] pilotpid: 949502
[2025-11-26 22:54:02] 2025-11-27 03:45:35,009 [wrapper] Pilot exit status: 0
[2025-11-26 22:54:02] 2025-11-27 03:45:35,032 [wrapper] pandaids: 6896714629
[2025-11-26 22:54:02] 2025-11-27 03:45:35,145 [wrapper] cleanup supervisor_pilot 2768974 949503
[2025-11-26 22:54:02] 2025-11-27 03:45:35,149 [wrapper] Test setup, not cleaning
[2025-11-26 22:54:02] 2025-11-27 03:45:35,154 [wrapper] apfmon messages muted
[2025-11-26 22:54:02] 2025-11-27 03:45:35,163 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:54:02] 2025-11-27 03:45:35,166 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:54:02]  *** Error codes and diagnostics ***
[2025-11-26 22:54:02]     "exeErrorCode": 0,
[2025-11-26 22:54:02]     "exeErrorDiag": "",
[2025-11-26 22:54:02]     "pilotErrorCode": 0,
[2025-11-26 22:54:02]     "pilotErrorDiag": "",
[2025-11-26 22:54:02]  *** Listing of results directory ***
[2025-11-26 22:54:02] total 1323084
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:46 queuedata.json
[2025-11-26 22:54:02] -rwx------. 1 boincer umatlas     36292 Nov 25 01:49 runpilot2-wrapper.sh
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:54:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-26 22:54:02] -rw-r--r--. 2 boincer umatlas 408626840 Nov 26 00:00 EVNT.47483658._002126.pool.root.1
[2025-11-26 22:54:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 22:54:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-26 22:54:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:00 input.tar.gz
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 00:00 pandaJob.out
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas    991877 Nov 26 00:01 agis_schedconf.cvmfs.json
[2025-11-26 22:54:02] drwx------. 5 boincer umatlas      4096 Nov 26 00:01 pilot3
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas       532 Nov 26 22:32 boinc_task_state.xml
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas 917981697 Nov 26 22:43 HITS.47556161._001092.pool.root.1
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas      1059 Nov 26 22:44 memory_monitor_summary.json
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas   2477186 Nov 26 22:44 log.47556161._001092.job.log.tgz.1
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas      8623 Nov 26 22:44 heartbeat.json
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas        95 Nov 26 22:45 pilot_heartbeat.json
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas      4823 Nov 26 22:45 pilotlog.txt
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas   9674491 Nov 26 22:45 log.47556161._001092.job.log.1
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas       353 Nov 26 22:45 output.list
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:45 runtime_log
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas  12175360 Nov 26 22:45 result.tar.gz
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 22:45 runtime_log.err
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas       662 Nov 26 22:45 rRWNDmU21h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiDMKDmxba0Nm.diag
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas      6879 Nov 26 22:49 init_data.xml
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas        28 Nov 26 22:53 wrapper_checkpoint.txt
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:54 boinc_mmap_file
[2025-11-26 22:54:02] -rw-r--r--. 1 boincer umatlas     21214 Nov 26 22:54 stderr.txt
[2025-11-26 22:54:02] HITS file was successfully produced:
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas 917981697 Nov 26 22:43 shared/HITS.pool.root.1
[2025-11-26 22:54:02]  *** Contents of shared directory: ***
[2025-11-26 22:54:02] total 1308016
[2025-11-26 22:54:02] -rw-r--r--. 2 boincer umatlas 408626840 Nov 26 00:00 ATLAS.root_0
[2025-11-26 22:54:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 22:54:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:00 input.tar.gz
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas 917981697 Nov 26 22:43 HITS.pool.root.1
[2025-11-26 22:54:02] -rw-------. 1 boincer umatlas  12175360 Nov 26 22:45 result.tar.gz
22:54:04 (944535): run_atlas exited; CPU time 268529.078925
22:54:04 (944535): called boinc_finish(0)

</stderr_txt>
]]>

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