Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:36 (1627766): wrapper (7.7.26015): starting
00:00:36 (1627766): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:36] Arguments: --nthreads 9
[2025-11-26 00:00:36] Threads: 9
[2025-11-26 00:00:36] Checking for CVMFS
[2025-11-26 00:00:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:38] 2.13.2.0 6111 33989 283020 153309 1 491 40196148 40960001 10427 16776704 0 34676397 99.729 22734102 37840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:00:38] CVMFS is ok
[2025-11-26 00:00:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:38] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:38] Checking for apptainer binary...
[2025-11-26 00:00:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:38] Running /usr/bin/apptainer --version
[2025-11-26 00:00:38] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:39] c-210-35-3.aglt2.org
[2025-11-26 00:00:39] apptainer works
[2025-11-26 00:00:39] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:39] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:39] Starting ATLAS job with PandaID=6896714119
[2025-11-26 00:00:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:59:51]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:59:51] 2025-11-27 19:59:01,891 | INFO     | monitor loop #8110: job 0:6896714119 is in state 'finished'
[2025-11-27 14:59:51] 2025-11-27 19:59:01,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:59:51] 2025-11-27 19:59:02,747 | INFO     | time since job start (140207s) is within the limit (172800.0s)
[2025-11-27 14:59:51] 2025-11-27 19:59:04,396 | INFO     | monitor loop #8111: job 0:6896714119 is in state 'finished'
[2025-11-27 14:59:51] 2025-11-27 19:59:04,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:59:51] 2025-11-27 19:59:04,719 | INFO     | PID=1646418 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:59:51] 2025-11-27 19:59:04,719 | INFO     | .. there are 10 such processes running
[2025-11-27 14:59:51] 2025-11-27 19:59:05,720 | INFO     | time since job start (140210s) is within the limit (172800.0s)
[2025-11-27 14:59:51] 2025-11-27 19:59:06,946 | INFO     | monitor loop #8112: job 0:6896714119 is in state 'finished'
[2025-11-27 14:59:51] 2025-11-27 19:59:06,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:59:51] 2025-11-27 19:59:07,727 | INFO     | time since job start (140212s) is within the limit (172800.0s)
[2025-11-27 14:59:51] 2025-11-27 19:59:09,451 | INFO     | monitor loop #8113: job 0:6896714119 is in state 'finished'
[2025-11-27 14:59:51] 2025-11-27 19:59:09,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:59:51] 2025-11-27 19:59:09,755 | INFO     | time since job start (140214s) is within the limit (172800.0s)
[2025-11-27 14:59:51] 2025-11-27 19:59:10,079 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 14:59:51] 2025-11-27 19:59:10,141 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2763.4512321428565
[2025-11-27 14:59:51] 2025-11-27 19:59:10,237 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896714119/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:59:51] 2025-11-27 19:59:10,238 | INFO     | extracted standard info from prmon json
[2025-11-27 14:59:51] 2025-11-27 19:59:10,238 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:59:51] 2025-11-27 19:59:10,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:59:51] 2025-11-27 19:59:10,396 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:59:51] 2025-11-27 19:59:10,404 | INFO     | sum of square deviations: 3748122364312.977
[2025-11-27 14:59:51] 2025-11-27 19:59:10,703 | INFO     | sum of deviations: 17383817426176.102
[2025-11-27 14:59:51] 2025-11-27 19:59:10,703 | INFO     | mean x: 1764203504.6230936
[2025-11-27 14:59:51] 2025-11-27 19:59:10,704 | INFO     | mean y: 3079637.5215686276
[2025-11-27 14:59:51] 2025-11-27 19:59:10,704 | INFO     | intersect: -8179308408.021703
[2025-11-27 14:59:51] 2025-11-27 19:59:10,706 | INFO     | chi2: 26.25318655340583
[2025-11-27 14:59:51] 2025-11-27 19:59:10,720 | INFO     | sum of square deviations: 3723681246291.3066
[2025-11-27 14:59:51] 2025-11-27 19:59:11,030 | INFO     | sum of deviations: 18295021908758.508
[2025-11-27 14:59:51] 2025-11-27 19:59:11,030 | INFO     | mean x: 1764203352.1349344
[2025-11-27 14:59:51] 2025-11-27 19:59:11,030 | INFO     | mean y: 3085321.8301310046
[2025-11-27 14:59:51] 2025-11-27 19:59:11,030 | INFO     | intersect: -8664718618.413157
[2025-11-27 14:59:51] 2025-11-27 19:59:11,033 | INFO     | chi2: 22.39634339627812
[2025-11-27 14:59:51] 2025-11-27 19:59:11,033 | INFO     | current chi2=22.39634339627812 (change=14.690952465072705 %)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,033 | INFO     | right removable region: 2289
[2025-11-27 14:59:51] 2025-11-27 19:59:11,046 | INFO     | sum of square deviations: 3723673513982.0327
[2025-11-27 14:59:51] 2025-11-27 19:59:11,409 | INFO     | sum of deviations: 16357297993625.516
[2025-11-27 14:59:51] 2025-11-27 19:59:11,410 | INFO     | mean x: 1764203657.1353712
[2025-11-27 14:59:51] 2025-11-27 19:59:11,410 | INFO     | mean y: 3086040.646724891
[2025-11-27 14:59:51] 2025-11-27 19:59:11,410 | INFO     | intersect: -7746681717.683778
[2025-11-27 14:59:51] 2025-11-27 19:59:11,412 | INFO     | chi2: 21.727087467921756
[2025-11-27 14:59:51] 2025-11-27 19:59:11,413 | INFO     | current chi2=21.727087467921756 (change=17.240189400539276 %)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,413 | INFO     | left removable region: 10
[2025-11-27 14:59:51] 2025-11-27 19:59:11,415 | INFO     | sum of square deviations: 3670269811962.166
[2025-11-27 14:59:51] 2025-11-27 19:59:11,532 | INFO     | sum of deviations: 16529136337978.98
[2025-11-27 14:59:51] 2025-11-27 19:59:11,532 | INFO     | mean x: 1764203626.6616938
[2025-11-27 14:59:51] 2025-11-27 19:59:11,532 | INFO     | mean y: 3098400.9118034225
[2025-11-27 14:59:51] 2025-11-27 19:59:11,532 | INFO     | intersect: -7942029278.259675
[2025-11-27 14:59:51] 2025-11-27 19:59:11,539 | INFO     | chi2: 13.89807393152871
[2025-11-27 14:59:51] 2025-11-27 19:59:11,539 | INFO     | current memory leak: 4.50 B/s (using 2279 data points, chi2=13.90)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,541 | INFO     | could have reported an average CPU frequency of 2750 MHz (79 samples)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | ..............................
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . Timing measurements:
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . get job = 0 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . initial setup = 7 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . payload setup = 67 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . stage-in = 0 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . payload execution = 140021 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . stage-out = 6 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | . log creation = 1 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,542 | INFO     | ..............................
[2025-11-27 14:59:51] 2025-11-27 19:59:11,767 | INFO     | time since job start (140216s) is within the limit (172800.0s)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | 
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | job summary report
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | --------------------------------------------------
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | PanDA job id: 6896714119
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | task id: 47556161
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | errors: (none)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:59:51] 2025-11-27 19:59:11,883 | INFO     | pilot state: finished 
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | transexitcode: 0
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | exeerrorcode: 0
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | exeerrordiag: 
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | exitcode: 0
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | exitmsg: OK
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | cpuconsumptiontime: 254103 s
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | nevents: 1000
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | neventsw: 0
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | pid: 1667472
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | pgrp: 1667472
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | corecount: 9
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | event service: False
[2025-11-27 14:59:51] 2025-11-27 19:59:11,884 | INFO     | sizes: {0: 2284037, 1: 2284093, 2: 2284320, 3: 2284320, 13: 2284348, 25: 2284404, 36: 2284560, 38: 2284850, 48: 2284878, 140093: 2373905, 140101: 2382899, 140103: 
[2025-11-27 14:59:51] 2025-11-27 19:59:11,885 | INFO     | --------------------------------------------------
[2025-11-27 14:59:51] 2025-11-27 19:59:11,885 | INFO     | 
[2025-11-27 14:59:51] 2025-11-27 19:59:11,885 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 14:59:51] 2025-11-27 19:59:11,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | job 6896714119 has completed (purged errors)
[2025-11-27 14:59:51] 2025-11-27 19:59:11,964 | INFO     | overall cleanup function is called
[2025-11-27 14:59:51] 2025-11-27 19:59:12,995 | INFO     | --- collectZombieJob: --- 10, [1667472]
[2025-11-27 14:59:51] 2025-11-27 19:59:12,995 | INFO     | zombie collector waiting for pid 1667472
[2025-11-27 14:59:51] 2025-11-27 19:59:12,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:59:51] 2025-11-27 19:59:12,995 | INFO     | collected zombie processes
[2025-11-27 14:59:51] 2025-11-27 19:59:12,995 | INFO     | will attempt to kill all subprocesses of pid=1667472
[2025-11-27 14:59:51] 2025-11-27 19:59:13,543 | INFO     | process IDs to be killed: [1667472] (in reverse order)
[2025-11-27 14:59:51] 2025-11-27 19:59:13,749 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:59:51] 2025-11-27 19:59:13,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:59:51] 2025-11-27 19:59:13,770 | INFO     | did not find any defunct processes belonging to 1667472
[2025-11-27 14:59:51] 2025-11-27 19:59:13,787 | INFO     | did not find any defunct processes belonging to 1667472
[2025-11-27 14:59:51] 2025-11-27 19:59:13,797 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:59:51] 2025-11-27 19:59:13,797 | INFO     | ready for new job
[2025-11-27 14:59:51] 2025-11-27 19:59:13,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:59:51] 2025-11-27 19:59:13,814 | INFO     | ***************************************
[2025-11-27 14:59:51] 2025-11-27 19:59:13,815 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:59:51] 2025-11-27 19:59:13,815 | INFO     | ***************************************
[2025-11-27 14:59:51] 2025-11-27 19:59:13,815 | INFO     | 
[2025-11-27 14:59:51] 2025-11-27 19:59:13,822 | INFO     | architecture information:
[2025-11-27 14:59:51] 2025-11-27 19:59:13,823 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:59:51] 2025-11-27 19:59:13,872 | INFO     | cat /etc/os-release:
[2025-11-27 14:59:51] NAME="CentOS Linux"
[2025-11-27 14:59:51] VERSION="7 (Core)"
[2025-11-27 14:59:51] ID="centos"
[2025-11-27 14:59:51] ID_LIKE="rhel fedora"
[2025-11-27 14:59:51] VERSION_ID="7"
[2025-11-27 14:59:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:59:51] ANSI_COLOR="0;31"
[2025-11-27 14:59:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:59:51] HOME_URL="https://www.centos.org/"
[2025-11-27 14:59:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:59:51] 
[2025-11-27 14:59:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:59:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:59:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:59:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:59:51] 
[2025-11-27 14:59:51] 2025-11-27 19:59:13,873 | INFO     | ***************************************
[2025-11-27 14:59:51] 2025-11-27 19:59:14,377 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 14:59:51] 2025-11-27 19:59:14,444 | INFO     | sufficient remaining disk space (70977060864 B)
[2025-11-27 14:59:51] 2025-11-27 19:59:14,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:59:51] 2025-11-27 19:59:14,446 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:59:51] 2025-11-27 19:59:14,446 | INFO     | update_server=False
[2025-11-27 14:59:51] 2025-11-27 19:59:14,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:59:51] 2025-11-27 19:59:14,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:59:51] 2025-11-27 19:59:14,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 14:59:51] 2025-11-27 19:59:14,490 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 14:59:51] 2025-11-27 19:59:14,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:59:51] 2025-11-27 19:59:14,491 | INFO     | will abort loop
[2025-11-27 14:59:51] 2025-11-27 19:59:14,522 | INFO     | all payload control threads have been joined
[2025-11-27 14:59:51] 2025-11-27 19:59:14,844 | INFO     | all data control threads have been joined
[2025-11-27 14:59:51] 2025-11-27 19:59:15,455 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:15,499 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:15,551 | INFO     | [payload] control thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:15,880 | INFO     | [data] control thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:15,925 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:15,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:15,955 | INFO     | all job control threads have been joined
[2025-11-27 14:59:51] 2025-11-27 19:59:16,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:59:51] 2025-11-27 19:59:16,445 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,457 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,609 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,616 | INFO     | [job] validate thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,641 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,735 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:59:51] 2025-11-27 19:59:16,893 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:16,961 | INFO     | [job] control thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:17,786 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:20,456 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:59:51] 2025-11-27 19:59:42,700 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:59:51] 2025-11-27 19:59:44,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768192202560)>', '<ExcThread(monitor, started 139767920432896)>']
[2025-11-27 14:59:51] 2025-11-27 19:59:45,471 | INFO     | PID=1646418 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:59:51] 2025-11-27 19:59:45,472 | INFO     | .. there are 10 such processes running
[2025-11-27 14:59:51] 2025-11-27 19:59:45,472 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:59:51] 2025-11-27 19:59:45,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:59:51] 2025-11-27 19:59:45,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:59:51] 2025-11-27 19:59:45,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:59:51] 2025-11-27 19:59:45,472 | INFO     | [monitor] control thread has ended
[2025-11-27 14:59:51] 2025-11-27 19:59:49,616 | INFO     | all workflow threads have been joined
[2025-11-27 14:59:51] 2025-11-27 19:59:49,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:59:51] 2025-11-27 19:59:49,616 | INFO     | traces error code: 0
[2025-11-27 14:59:51] 2025-11-27 19:59:49,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:59:51] 2025-11-27 19:59:50,148 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:59:51] 2025-11-27 19:59:50,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:59:51] 2025-11-27 19:59:50,178 [wrapper] pilotpid: 1646418
[2025-11-27 14:59:51] 2025-11-27 19:59:50,201 [wrapper] Pilot exit status: 0
[2025-11-27 14:59:51] 2025-11-27 19:59:50,261 [wrapper] pandaids: 6896714119
[2025-11-27 14:59:51] 2025-11-27 19:59:50,399 [wrapper] cleanup supervisor_pilot 2161547 1646419
[2025-11-27 14:59:51] 2025-11-27 19:59:50,407 [wrapper] Test setup, not cleaning
[2025-11-27 14:59:51] 2025-11-27 19:59:50,425 [wrapper] apfmon messages muted
[2025-11-27 14:59:51] 2025-11-27 19:59:50,440 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:59:51] 2025-11-27 19:59:50,470 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:59:51]  *** Error codes and diagnostics ***
[2025-11-27 14:59:51]     "exeErrorCode": 0,
[2025-11-27 14:59:51]     "exeErrorDiag": "",
[2025-11-27 14:59:51]     "pilotErrorCode": 0,
[2025-11-27 14:59:51]     "pilotErrorDiag": "",
[2025-11-27 14:59:51]  *** Listing of results directory ***
[2025-11-27 14:59:51] total 1340940
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 01:04 pilot3.tar.gz
[2025-11-27 14:59:51] -rwx------. 1 boincer umatlas     36292 Nov 25 01:33 runpilot2-wrapper.sh
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 01:33 queuedata.json
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:59:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-27 14:59:51] -rw-r--r--. 2 boincer umatlas 407741440 Nov 26 00:00 EVNT.47483658._002121.pool.root.1
[2025-11-27 14:59:51] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:00 input.tar.gz
[2025-11-27 14:59:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 14:59:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:00 pandaJob.out
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas    991877 Nov 26 00:02 agis_schedconf.cvmfs.json
[2025-11-27 14:59:51] drwx------. 5 boincer umatlas      4096 Nov 26 00:02 pilot3
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas       533 Nov 27 14:35 boinc_task_state.xml
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas 920291187 Nov 27 14:55 HITS.47556161._001049.pool.root.1
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 14:56 init_data.xml
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas      1060 Nov 27 14:58 memory_monitor_summary.json
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas   3196019 Nov 27 14:58 log.47556161._001049.job.log.tgz.1
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas        95 Nov 27 14:59 pilot_heartbeat.json
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas      8638 Nov 27 14:59 heartbeat.json
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:59 boinc_mmap_file
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:59 wrapper_checkpoint.txt
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas      5010 Nov 27 14:59 pilotlog.txt
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas  17384134 Nov 27 14:59 log.47556161._001049.job.log.1
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas       353 Nov 27 14:59 output.list
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:59 runtime_log
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas  20602880 Nov 27 14:59 result.tar.gz
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas      9354 Nov 27 14:59 runtime_log.err
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas       665 Nov 27 14:59 FANLDmVn1h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtCMKDmhHoMKm.diag
[2025-11-27 14:59:51] -rw-r--r--. 1 boincer umatlas     21878 Nov 27 14:59 stderr.txt
[2025-11-27 14:59:51] HITS file was successfully produced:
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas 920291187 Nov 27 14:55 shared/HITS.pool.root.1
[2025-11-27 14:59:51]  *** Contents of shared directory: ***
[2025-11-27 14:59:51] total 1317636
[2025-11-27 14:59:51] -rw-r--r--. 2 boincer umatlas 407741440 Nov 26 00:00 ATLAS.root_0
[2025-11-27 14:59:51] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 00:00 input.tar.gz
[2025-11-27 14:59:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas 920291187 Nov 27 14:55 HITS.pool.root.1
[2025-11-27 14:59:51] -rw-------. 1 boincer umatlas  20602880 Nov 27 14:59 result.tar.gz
14:59:52 (1627766): run_atlas exited; CPU time 256251.647538
14:59:52 (1627766): called boinc_finish(0)

</stderr_txt>
]]>

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