Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:37 (146155): wrapper (7.7.26015): starting
00:01:37 (146155): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:01:37] Arguments: --nthreads 8
[2025-11-26 00:01:37] Threads: 8
[2025-11-26 00:01:37] Checking for CVMFS
[2025-11-26 00:01:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:01:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:01:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:01:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:01:38] 2.13.3.0 15513 29551 377540 153309 3 142 21853740 40960000 42643 16776704 0 292999372 99.867 97747387 31743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:01:38] CVMFS is ok
[2025-11-26 00:01:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:01:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:01:38] Further information can be found at the LHC@home message board.
[2025-11-26 00:01:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:01:38] Checking for apptainer binary...
[2025-11-26 00:01:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:01:38] Running /usr/bin/apptainer --version
[2025-11-26 00:01:38] apptainer version 1.4.4-1.el9
[2025-11-26 00:01:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:01:38] c-1-1.aglt2.org
[2025-11-26 00:01:38] apptainer works
[2025-11-26 00:01:38] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:01:38] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:01:39] Starting ATLAS job with PandaID=6891072474
[2025-11-26 00:01:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:39:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:39:15] 2025-11-27 00:38:29,529 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:39:15] 2025-11-27 00:38:29,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:39:15] 2025-11-27 00:38:29,557 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:39:15] 2025-11-27 00:38:29,559 | INFO     | sum of square deviations: 479006866405.60144
[2025-11-26 19:39:15] 2025-11-27 00:38:29,609 | INFO     | sum of deviations: 2770141521541.2593
[2025-11-26 19:39:15] 2025-11-27 00:38:29,609 | INFO     | mean x: 1764168630.931661
[2025-11-26 19:39:15] 2025-11-27 00:38:29,610 | INFO     | mean y: 2930430.92733564
[2025-11-26 19:39:15] 2025-11-27 00:38:29,610 | INFO     | intersect: -10199421807.185057
[2025-11-26 19:39:15] 2025-11-27 00:38:29,611 | INFO     | chi2: 9.354970169120277
[2025-11-26 19:39:15] 2025-11-27 00:38:29,617 | INFO     | sum of square deviations: 472818585365.3081
[2025-11-26 19:39:15] 2025-11-27 00:38:29,662 | INFO     | sum of deviations: 3178628470870.5547
[2025-11-26 19:39:15] 2025-11-27 00:38:29,663 | INFO     | mean x: 1764168478.43788
[2025-11-26 19:39:15] 2025-11-27 00:38:29,663 | INFO     | mean y: 2940496.441355343
[2025-11-26 19:39:15] 2025-11-27 00:38:29,663 | INFO     | intersect: -11857075853.4711
[2025-11-26 19:39:15] 2025-11-27 00:38:29,669 | INFO     | chi2: 5.961556912866515
[2025-11-26 19:39:15] 2025-11-27 00:38:29,670 | INFO     | current chi2=5.961556912866515 (change=36.273907825543304 %)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,671 | INFO     | sum of square deviations: 466683840212.4258
[2025-11-26 19:39:15] 2025-11-27 00:38:29,723 | INFO     | sum of deviations: 3523311948891.4873
[2025-11-26 19:39:15] 2025-11-27 00:38:29,723 | INFO     | mean x: 1764168325.9441535
[2025-11-26 19:39:15] 2025-11-27 00:38:29,724 | INFO     | mean y: 2949058.445026178
[2025-11-26 19:39:15] 2025-11-27 00:38:29,724 | INFO     | intersect: -13315950819.951557
[2025-11-26 19:39:15] 2025-11-27 00:38:29,725 | INFO     | chi2: 3.321260113410678
[2025-11-26 19:39:15] 2025-11-27 00:38:29,725 | INFO     | current chi2=3.321260113410678 (change=44.28871246297126 %)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,726 | INFO     | sum of square deviations: 460602328358.3526
[2025-11-26 19:39:15] 2025-11-27 00:38:29,776 | INFO     | sum of deviations: 3643467416565.0967
[2025-11-26 19:39:15] 2025-11-27 00:38:29,777 | INFO     | mean x: 1764168173.4496057
[2025-11-26 19:39:15] 2025-11-27 00:38:29,777 | INFO     | mean y: 2952067.549517967
[2025-11-26 19:39:15] 2025-11-27 00:38:29,777 | INFO     | intersect: -13952012685.264328
[2025-11-26 19:39:15] 2025-11-27 00:38:29,778 | INFO     | chi2: 2.822755017774419
[2025-11-26 19:39:15] 2025-11-27 00:38:29,778 | INFO     | current chi2=2.822755017774419 (change=15.009516828368266 %)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,779 | INFO     | right removable region: 1140
[2025-11-26 19:39:15] 2025-11-27 00:38:29,784 | INFO     | sum of square deviations: 472817575815.30835
[2025-11-26 19:39:15] 2025-11-27 00:38:29,837 | INFO     | sum of deviations: 2421321434691.2593
[2025-11-26 19:39:15] 2025-11-27 00:38:29,837 | INFO     | mean x: 1764168783.43788
[2025-11-26 19:39:15] 2025-11-27 00:38:29,837 | INFO     | mean y: 2939017.682015639
[2025-11-26 19:39:15] 2025-11-27 00:38:29,837 | INFO     | intersect: -9031453755.017952
[2025-11-26 19:39:15] 2025-11-27 00:38:29,839 | INFO     | chi2: 6.847869913141674
[2025-11-26 19:39:15] 2025-11-27 00:38:29,839 | INFO     | current chi2=6.847869913141674 (change=26.799660615212478 %)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,840 | INFO     | sum of square deviations: 466682102327.9647
[2025-11-26 19:39:15] 2025-11-27 00:38:29,864 | INFO     | sum of deviations: 2322292462896.363
[2025-11-26 19:39:15] 2025-11-27 00:38:29,865 | INFO     | mean x: 1764168935.940663
[2025-11-26 19:39:15] 2025-11-27 00:38:29,865 | INFO     | mean y: 2941478.5200698082
[2025-11-26 19:39:15] 2025-11-27 00:38:29,865 | INFO     | intersect: -8775874342.301266
[2025-11-26 19:39:15] 2025-11-27 00:38:29,871 | INFO     | chi2: 6.762078343379086
[2025-11-26 19:39:15] 2025-11-27 00:38:29,871 | INFO     | current chi2=6.762078343379086 (change=1.2528212546495086 %)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,871 | INFO     | left removable region: 20
[2025-11-26 19:39:15] 2025-11-27 00:38:29,875 | INFO     | sum of square deviations: 435634029404.27094
[2025-11-26 19:39:15] 2025-11-27 00:38:29,898 | INFO     | sum of deviations: 3041962901971.46
[2025-11-26 19:39:15] 2025-11-27 00:38:29,898 | INFO     | mean x: 1764168752.9607143
[2025-11-26 19:39:15] 2025-11-27 00:38:29,898 | INFO     | mean y: 2967003.4196428573
[2025-11-26 19:39:15] 2025-11-27 00:38:29,898 | INFO     | intersect: -12315941844.593166
[2025-11-26 19:39:15] 2025-11-27 00:38:29,900 | INFO     | chi2: 0.1451180340204073
[2025-11-26 19:39:15] 2025-11-27 00:38:29,900 | INFO     | current memory leak: 6.98 B/s (using 1120 data points, chi2=0.15)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,901 | INFO     | could have reported an average CPU frequency of 2926 MHz (42 samples)
[2025-11-26 19:39:15] 2025-11-27 00:38:29,901 | INFO     | ..............................
[2025-11-26 19:39:15] 2025-11-27 00:38:29,901 | INFO     | . Timing measurements:
[2025-11-26 19:39:15] 2025-11-27 00:38:29,901 | INFO     | . get job = 0 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,901 | INFO     | . initial setup = 2 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,901 | INFO     | . payload setup = 21 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,902 | INFO     | . stage-in = 0 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,902 | INFO     | . payload execution = 70489 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,902 | INFO     | . stage-out = 5 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,902 | INFO     | . log creation = 1 s
[2025-11-26 19:39:15] 2025-11-27 00:38:29,902 | INFO     | ..............................
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | 
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | job summary report
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | --------------------------------------------------
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | PanDA job id: 6891072474
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | task id: 47483661
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | errors: (none)
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | pilot state: finished 
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | transexitcode: 0
[2025-11-26 19:39:15] 2025-11-27 00:38:30,062 | INFO     | exeerrorcode: 0
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | exeerrordiag: 
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | exitcode: 0
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | exitmsg: OK
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | cpuconsumptiontime: 259086 s
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | nevents: 1000
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | neventsw: 0
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | pid: 160922
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | pgrp: 160922
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | corecount: 8
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | event service: False
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | sizes: {0: 2284304, 11: 2284566, 22: 2284594, 70515: 2340948, 70521: 2349942, 70522: 2349998, 70549: 2350372}
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | --------------------------------------------------
[2025-11-26 19:39:15] 2025-11-27 00:38:30,063 | INFO     | 
[2025-11-26 19:39:15] 2025-11-27 00:38:30,064 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 19:39:15] 2025-11-27 00:38:30,095 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | job 6891072474 has completed (purged errors)
[2025-11-26 19:39:15] 2025-11-27 00:38:30,097 | INFO     | overall cleanup function is called
[2025-11-26 19:39:15] 2025-11-27 00:38:31,125 | INFO     | --- collectZombieJob: --- 10, [160922]
[2025-11-26 19:39:15] 2025-11-27 00:38:31,125 | INFO     | zombie collector waiting for pid 160922
[2025-11-26 19:39:15] 2025-11-27 00:38:31,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:39:15] 2025-11-27 00:38:31,125 | INFO     | collected zombie processes
[2025-11-26 19:39:15] 2025-11-27 00:38:31,125 | INFO     | will attempt to kill all subprocesses of pid=160922
[2025-11-26 19:39:15] 2025-11-27 00:38:32,528 | INFO     | process IDs to be killed: [160922] (in reverse order)
[2025-11-26 19:39:15] 2025-11-27 00:38:32,848 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:39:15] 2025-11-27 00:38:32,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:39:15] 2025-11-27 00:38:32,924 | INFO     | did not find any defunct processes belonging to 160922
[2025-11-26 19:39:15] 2025-11-27 00:38:32,985 | INFO     | did not find any defunct processes belonging to 160922
[2025-11-26 19:39:15] 2025-11-27 00:38:32,997 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:39:15] 2025-11-27 00:38:32,997 | INFO     | ready for new job
[2025-11-26 19:39:15] 2025-11-27 00:38:32,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:39:15] 2025-11-27 00:38:33,006 | INFO     | ***************************************
[2025-11-26 19:39:15] 2025-11-27 00:38:33,007 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:39:15] 2025-11-27 00:38:33,007 | INFO     | ***************************************
[2025-11-26 19:39:15] 2025-11-27 00:38:33,007 | INFO     | 
[2025-11-26 19:39:15] 2025-11-27 00:38:33,016 | INFO     | architecture information:
[2025-11-26 19:39:15] 2025-11-27 00:38:33,024 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:39:15] 2025-11-27 00:38:33,116 | INFO     | cat /etc/os-release:
[2025-11-26 19:39:15] NAME="CentOS Linux"
[2025-11-26 19:39:15] VERSION="7 (Core)"
[2025-11-26 19:39:15] ID="centos"
[2025-11-26 19:39:15] ID_LIKE="rhel fedora"
[2025-11-26 19:39:15] VERSION_ID="7"
[2025-11-26 19:39:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:39:15] ANSI_COLOR="0;31"
[2025-11-26 19:39:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:39:15] HOME_URL="https://www.centos.org/"
[2025-11-26 19:39:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:39:15] 
[2025-11-26 19:39:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:39:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:39:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:39:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:39:15] 
[2025-11-26 19:39:15] 2025-11-27 00:38:33,116 | INFO     | ***************************************
[2025-11-26 19:39:15] 2025-11-27 00:38:33,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 19:39:15] 2025-11-27 00:38:33,669 | INFO     | sufficient remaining disk space (97873035264 B)
[2025-11-26 19:39:15] 2025-11-27 00:38:33,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:39:15] 2025-11-27 00:38:33,670 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:39:15] 2025-11-27 00:38:33,670 | INFO     | update_server=False
[2025-11-26 19:39:15] 2025-11-27 00:38:33,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:39:15] 2025-11-27 00:38:33,937 | INFO     | all payload control threads have been joined
[2025-11-26 19:39:15] 2025-11-27 00:38:34,351 | INFO     | all job control threads have been joined
[2025-11-26 19:39:15] 2025-11-27 00:38:34,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:39:15] 2025-11-27 00:38:34,465 | INFO     | aborting loop
[2025-11-26 19:39:15] 2025-11-27 00:38:34,587 | INFO     | all data control threads have been joined
[2025-11-26 19:39:15] 2025-11-27 00:38:34,675 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:34,845 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:34,919 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:34,943 | INFO     | [payload] control thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:39:15] 2025-11-27 00:38:35,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:39:15] 2025-11-27 00:38:35,108 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,131 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,357 | INFO     | [job] control thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,468 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,470 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,592 | INFO     | [data] control thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,671 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:35,808 | INFO     | [job] validate thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:36,088 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:36,136 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:36,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:39:15] 2025-11-27 00:38:37,012 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:38:40,436 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:39:15] 2025-11-27 00:39:05,135 | INFO     | PID=152446 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 19:39:15] 2025-11-27 00:39:05,135 | INFO     | .. there are 78 such processes running
[2025-11-26 19:39:15] 2025-11-27 00:39:05,137 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:39:15] 2025-11-27 00:39:05,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:39:15] 2025-11-27 00:39:05,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:39:15] 2025-11-27 00:39:06,412 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:39:15] 2025-11-27 00:39:08,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412524656448)>', '<ExcThread(monitor, started 140412178118400)>']
[2025-11-26 19:39:15] 2025-11-27 00:39:09,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:39:15] 2025-11-27 00:39:09,164 | INFO     | [monitor] control thread has ended
[2025-11-26 19:39:15] 2025-11-27 00:39:13,460 | INFO     | all workflow threads have been joined
[2025-11-26 19:39:15] 2025-11-27 00:39:13,461 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:39:15] 2025-11-27 00:39:13,461 | INFO     | traces error code: 0
[2025-11-26 19:39:15] 2025-11-27 00:39:13,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:39:15] 2025-11-27 00:39:13,704 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:39:15] 2025-11-27 00:39:13,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:39:15] 2025-11-27 00:39:13,730 [wrapper] pilotpid: 152446
[2025-11-26 19:39:15] 2025-11-27 00:39:13,755 [wrapper] Pilot exit status: 0
[2025-11-26 19:39:15] 2025-11-27 00:39:13,874 [wrapper] pandaids: 6891072474
[2025-11-26 19:39:15] 2025-11-27 00:39:14,273 [wrapper] cleanup supervisor_pilot 3619257 152447
[2025-11-26 19:39:15] 2025-11-27 00:39:14,330 [wrapper] Test setup, not cleaning
[2025-11-26 19:39:15] 2025-11-27 00:39:14,364 [wrapper] apfmon messages muted
[2025-11-26 19:39:15] 2025-11-27 00:39:14,386 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:39:15] 2025-11-27 00:39:14,407 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:39:15]  *** Error codes and diagnostics ***
[2025-11-26 19:39:15]     "exeErrorCode": 0,
[2025-11-26 19:39:15]     "exeErrorDiag": "",
[2025-11-26 19:39:15]     "pilotErrorCode": 0,
[2025-11-26 19:39:15]     "pilotErrorDiag": "",
[2025-11-26 19:39:15]  *** Listing of results directory ***
[2025-11-26 19:39:15] total 1317824
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 00:55 pilot3.tar.gz
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 00:59 queuedata.json
[2025-11-26 19:39:15] -rwx------. 1 boincer umatlas     36292 Nov 18 01:01 runpilot2-wrapper.sh
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:39:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:01 run_atlas
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:01 job.xml
[2025-11-26 19:39:15] -rw-r--r--. 2 boincer umatlas 410266848 Nov 26 00:01 EVNT.47483658._000189.pool.root.1
[2025-11-26 19:39:15] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:01 start_atlas.sh
[2025-11-26 19:39:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:01 shared
[2025-11-26 19:39:15] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:01 input.tar.gz
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:01 boinc_lockfile
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 00:01 pandaJob.out
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas    991877 Nov 26 00:01 agis_schedconf.cvmfs.json
[2025-11-26 19:39:15] drwx------. 5 boincer umatlas      4096 Nov 26 00:01 pilot3
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas       533 Nov 26 19:22 boinc_task_state.xml
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas 914138384 Nov 26 19:37 HITS.47483661._001889.pool.root.1
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas      1058 Nov 26 19:37 memory_monitor_summary.json
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas   1516240 Nov 26 19:37 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas   2219978 Nov 26 19:38 log.47483661._001889.job.log.tgz.1
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas      6841 Nov 26 19:38 init_data.xml
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas      8620 Nov 26 19:38 heartbeat.json
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas        95 Nov 26 19:39 pilot_heartbeat.json
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas      4823 Nov 26 19:39 pilotlog.txt
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:39 boinc_mmap_file
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:39 wrapper_checkpoint.txt
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas   8346663 Nov 26 19:39 log.47483661._001889.job.log.1
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas       353 Nov 26 19:39 output.list
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas       620 Nov 26 19:39 runtime_log
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas  10588160 Nov 26 19:39 result.tar.gz
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas      8689 Nov 26 19:39 runtime_log.err
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas       657 Nov 26 19:39 a9eMDmLxTf8n9Rq4apOajLDm4fhM0noT9bVof3QYDmF6qMDmZHylWo.diag
[2025-11-26 19:39:15] -rw-r--r--. 1 boincer umatlas     21100 Nov 26 19:39 stderr.txt
[2025-11-26 19:39:15] HITS file was successfully produced:
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas 914138384 Nov 26 19:37 shared/HITS.pool.root.1
[2025-11-26 19:39:15]  *** Contents of shared directory: ***
[2025-11-26 19:39:15] total 1304308
[2025-11-26 19:39:15] -rw-r--r--. 2 boincer umatlas 410266848 Nov 26 00:01 ATLAS.root_0
[2025-11-26 19:39:15] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:01 start_atlas.sh
[2025-11-26 19:39:15] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:01 input.tar.gz
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas 914138384 Nov 26 19:37 HITS.pool.root.1
[2025-11-26 19:39:15] -rw-------. 1 boincer umatlas  10588160 Nov 26 19:39 result.tar.gz
19:39:17 (146155): run_atlas exited; CPU time 263027.455319
19:39:17 (146155): called boinc_finish(0)

</stderr_txt>
]]>

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