Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:00 (305768): wrapper (7.7.26015): starting
00:04:00 (305768): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:04:01] Arguments: --nthreads 9
[2025-11-26 00:04:01] Threads: 9
[2025-11-26 00:04:01] Checking for CVMFS
[2025-11-26 00:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:03] 2.13.3.0 7030 4924 237788 153309 0 334 25065985 32935937 59326 16776704 0 40140404 99.716 31238654 32394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:03] CVMFS is ok
[2025-11-26 00:04:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:03] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:03] Checking for apptainer binary...
[2025-11-26 00:04:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:03] Running /usr/bin/apptainer --version
[2025-11-26 00:04:03] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:03] lc-10-10.aglt2.org
[2025-11-26 00:04:03] apptainer works
[2025-11-26 00:04:04] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:04:04] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:04:04] Starting ATLAS job with PandaID=6891571132
[2025-11-26 00:04:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:51:38]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:51:38] 2025-11-27 01:51:00,650 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 20:51:38] 2025-11-27 01:51:00,680 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2764.3157187499983
[2025-11-26 20:51:38] 2025-11-27 01:51:00,720 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6891571132/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:51:38] 2025-11-27 01:51:00,723 | INFO     | extracted standard info from prmon json
[2025-11-26 20:51:38] 2025-11-27 01:51:00,723 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:51:38] 2025-11-27 01:51:00,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:51:38] 2025-11-27 01:51:00,745 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:51:38] 2025-11-27 01:51:00,747 | INFO     | sum of square deviations: 567205164061.1339
[2025-11-26 20:51:38] 2025-11-27 01:51:00,792 | INFO     | sum of deviations: 3333048408298.323
[2025-11-26 20:51:38] 2025-11-27 01:51:00,793 | INFO     | mean x: 1764170925.5224857
[2025-11-26 20:51:38] 2025-11-27 01:51:00,793 | INFO     | mean y: 3000935.2608340145
[2025-11-26 20:51:38] 2025-11-27 01:51:00,793 | INFO     | intersect: -10363736654.323492
[2025-11-26 20:51:38] 2025-11-27 01:51:00,799 | INFO     | chi2: 14.925939686641405
[2025-11-26 20:51:38] 2025-11-27 01:51:00,800 | INFO     | sum of square deviations: 560277500626.6876
[2025-11-26 20:51:38] 2025-11-27 01:51:00,823 | INFO     | time since job start (74747s) is within the limit (172800.0s)
[2025-11-26 20:51:38] 2025-11-27 01:51:00,861 | INFO     | sum of deviations: 3778255573956.3433
[2025-11-26 20:51:38] 2025-11-27 01:51:00,861 | INFO     | mean x: 1764170773.0328407
[2025-11-26 20:51:38] 2025-11-27 01:51:00,861 | INFO     | mean y: 3010734.341543514
[2025-11-26 20:51:38] 2025-11-27 01:51:00,861 | INFO     | intersect: -11893751225.87754
[2025-11-26 20:51:38] 2025-11-27 01:51:00,863 | INFO     | chi2: 11.556617621803282
[2025-11-26 20:51:38] 2025-11-27 01:51:00,863 | INFO     | current chi2=11.556617621803282 (change=22.573600962984187 %)
[2025-11-26 20:51:38] 2025-11-27 01:51:00,863 | INFO     | right removable region: 1217
[2025-11-26 20:51:38] 2025-11-27 01:51:00,865 | INFO     | sum of square deviations: 560275618776.687
[2025-11-26 20:51:38] 2025-11-27 01:51:00,897 | INFO     | sum of deviations: 2825283872145.5146
[2025-11-26 20:51:38] 2025-11-27 01:51:00,897 | INFO     | mean x: 1764171078.0328407
[2025-11-26 20:51:38] 2025-11-27 01:51:00,897 | INFO     | mean y: 3012108.4121510675
[2025-11-26 20:51:38] 2025-11-27 01:51:00,897 | INFO     | intersect: -8893116738.590868
[2025-11-26 20:51:38] 2025-11-27 01:51:00,899 | INFO     | chi2: 10.785003075380658
[2025-11-26 20:51:38] 2025-11-27 01:51:00,899 | INFO     | current chi2=10.785003075380658 (change=27.743222190337885 %)
[2025-11-26 20:51:38] 2025-11-27 01:51:00,900 | INFO     | sum of square deviations: 553402725716.9775
[2025-11-26 20:51:38] 2025-11-27 01:51:00,930 | INFO     | sum of deviations: 2381944331508.91
[2025-11-26 20:51:38] 2025-11-27 01:51:00,930 | INFO     | mean x: 1764171230.543281
[2025-11-26 20:51:38] 2025-11-27 01:51:00,930 | INFO     | mean y: 3021943.449299258
[2025-11-26 20:51:38] 2025-11-27 01:51:00,930 | INFO     | intersect: -7590286631.168645
[2025-11-26 20:51:38] 2025-11-27 01:51:00,932 | INFO     | chi2: 7.724699457303188
[2025-11-26 20:51:38] 2025-11-27 01:51:00,932 | INFO     | current chi2=7.724699457303188 (change=28.375547013642883 %)
[2025-11-26 20:51:38] 2025-11-27 01:51:00,954 | INFO     | sum of square deviations: 546586695318.1189
[2025-11-26 20:51:38] 2025-11-27 01:51:00,991 | INFO     | sum of deviations: 2175266495305.3093
[2025-11-26 20:51:38] 2025-11-27 01:51:00,991 | INFO     | mean x: 1764171383.048841
[2025-11-26 20:51:38] 2025-11-27 01:51:00,992 | INFO     | mean y: 3026563.0455298014
[2025-11-26 20:51:38] 2025-11-27 01:51:00,992 | INFO     | intersect: -7017896072.638247
[2025-11-26 20:51:38] 2025-11-27 01:51:01,007 | INFO     | chi2: 7.01744913373971
[2025-11-26 20:51:38] 2025-11-27 01:51:01,007 | INFO     | current chi2=7.01744913373971 (change=9.155700198728384 %)
[2025-11-26 20:51:38] 2025-11-27 01:51:01,007 | INFO     | left removable region: 30
[2025-11-26 20:51:38] 2025-11-27 01:51:01,009 | INFO     | sum of square deviations: 518573994491.13556
[2025-11-26 20:51:38] 2025-11-27 01:51:01,037 | INFO     | sum of deviations: 2457019934476.7114
[2025-11-26 20:51:38] 2025-11-27 01:51:01,037 | INFO     | mean x: 1764171657.555181
[2025-11-26 20:51:38] 2025-11-27 01:51:01,037 | INFO     | mean y: 3044934.599831508
[2025-11-26 20:51:38] 2025-11-27 01:51:01,037 | INFO     | intersect: -8355655996.219787
[2025-11-26 20:51:38] 2025-11-27 01:51:01,039 | INFO     | chi2: 2.564796459916301
[2025-11-26 20:51:38] 2025-11-27 01:51:01,039 | INFO     | current memory leak: 4.74 B/s (using 1187 data points, chi2=2.56)
[2025-11-26 20:51:38] 2025-11-27 01:51:01,040 | INFO     | could have reported an average CPU frequency of 2731 MHz (44 samples)
[2025-11-26 20:51:38] 2025-11-27 01:51:01,040 | INFO     | ..............................
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . Timing measurements:
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . get job = 0 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . initial setup = 6 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . payload setup = 43 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . stage-in = 0 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . payload execution = 74601 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . stage-out = 7 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | . log creation = 2 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,041 | INFO     | ..............................
[2025-11-26 20:51:38] 2025-11-27 01:51:01,563 | INFO     | 
[2025-11-26 20:51:38] 2025-11-27 01:51:01,563 | INFO     | job summary report
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | --------------------------------------------------
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | PanDA job id: 6891571132
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | task id: 47493068
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | errors: (none)
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | pilot state: finished 
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | transexitcode: 0
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | exeerrorcode: 0
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | exeerrordiag: 
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | exitcode: 0
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | exitmsg: OK
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | cpuconsumptiontime: 266711 s
[2025-11-26 20:51:38] 2025-11-27 01:51:01,564 | INFO     | nevents: 1000
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | neventsw: 0
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | pid: 328469
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | pgrp: 328469
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | corecount: 9
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | event service: False
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | sizes: {0: 2283475, 1: 2284160, 2: 2284359, 13: 2284359, 24: 2284415, 32: 2284705, 35: 2284861, 74646: 2343507, 74654: 2352557, 74682: 2352747}
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | --------------------------------------------------
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | 
[2025-11-26 20:51:38] 2025-11-27 01:51:01,565 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-26 20:51:38] 2025-11-27 01:51:01,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:51:38] 2025-11-27 01:51:01,660 | INFO     | job 6891571132 has completed (purged errors)
[2025-11-26 20:51:38] 2025-11-27 01:51:01,661 | INFO     | overall cleanup function is called
[2025-11-26 20:51:38] 2025-11-27 01:51:02,681 | INFO     | --- collectZombieJob: --- 10, [328469]
[2025-11-26 20:51:38] 2025-11-27 01:51:02,682 | INFO     | zombie collector waiting for pid 328469
[2025-11-26 20:51:38] 2025-11-27 01:51:02,682 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:51:38] 2025-11-27 01:51:02,682 | INFO     | collected zombie processes
[2025-11-26 20:51:38] 2025-11-27 01:51:02,682 | INFO     | will attempt to kill all subprocesses of pid=328469
[2025-11-26 20:51:38] 2025-11-27 01:51:04,895 | INFO     | process IDs to be killed: [328469] (in reverse order)
[2025-11-26 20:51:38] 2025-11-27 01:51:05,202 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:51:38] 2025-11-27 01:51:05,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:51:38] 2025-11-27 01:51:05,235 | INFO     | did not find any defunct processes belonging to 328469
[2025-11-26 20:51:38] 2025-11-27 01:51:05,276 | INFO     | did not find any defunct processes belonging to 328469
[2025-11-26 20:51:38] 2025-11-27 01:51:05,281 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:51:38] 2025-11-27 01:51:05,281 | INFO     | ready for new job
[2025-11-26 20:51:38] 2025-11-27 01:51:05,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:51:38] 2025-11-27 01:51:05,290 | INFO     | ***************************************
[2025-11-26 20:51:38] 2025-11-27 01:51:05,291 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:51:38] 2025-11-27 01:51:05,291 | INFO     | ***************************************
[2025-11-26 20:51:38] 2025-11-27 01:51:05,291 | INFO     | 
[2025-11-26 20:51:38] 2025-11-27 01:51:05,302 | INFO     | architecture information:
[2025-11-26 20:51:38] 2025-11-27 01:51:05,306 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:51:38] 2025-11-27 01:51:05,348 | INFO     | cat /etc/os-release:
[2025-11-26 20:51:38] NAME="CentOS Linux"
[2025-11-26 20:51:38] VERSION="7 (Core)"
[2025-11-26 20:51:38] ID="centos"
[2025-11-26 20:51:38] ID_LIKE="rhel fedora"
[2025-11-26 20:51:38] VERSION_ID="7"
[2025-11-26 20:51:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:51:38] ANSI_COLOR="0;31"
[2025-11-26 20:51:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:51:38] HOME_URL="https://www.centos.org/"
[2025-11-26 20:51:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:51:38] 
[2025-11-26 20:51:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:51:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:51:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:51:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:51:38] 
[2025-11-26 20:51:38] 2025-11-27 01:51:05,349 | INFO     | ***************************************
[2025-11-26 20:51:38] 2025-11-27 01:51:05,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-26 20:51:38] 2025-11-27 01:51:05,927 | INFO     | sufficient remaining disk space (86787489792 B)
[2025-11-26 20:51:38] 2025-11-27 01:51:05,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:51:38] 2025-11-27 01:51:05,927 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:51:38] 2025-11-27 01:51:05,928 | INFO     | update_server=False
[2025-11-26 20:51:38] 2025-11-27 01:51:05,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:51:38] 2025-11-27 01:51:06,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:51:38] 2025-11-27 01:51:06,305 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 20:51:38] 2025-11-27 01:51:06,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 20:51:38] 2025-11-27 01:51:06,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:51:38] 2025-11-27 01:51:06,306 | INFO     | will abort loop
[2025-11-26 20:51:38] 2025-11-27 01:51:06,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:51:38] 2025-11-27 01:51:06,523 | INFO     | all data control threads have been joined
[2025-11-26 20:51:38] 2025-11-27 01:51:06,567 | INFO     | all job control threads have been joined
[2025-11-26 20:51:38] 2025-11-27 01:51:06,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:51:38] 2025-11-27 01:51:06,828 | INFO     | all payload control threads have been joined
[2025-11-26 20:51:38] 2025-11-27 01:51:06,933 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,030 | INFO     | [job] validate thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,093 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,160 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,302 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,333 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,540 | INFO     | [data] control thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,577 | INFO     | [job] control thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,834 | INFO     | [payload] control thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:07,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:08,105 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:08,156 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:08,169 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:08,339 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:08,430 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:10,581 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:51:38] 2025-11-27 01:51:30,604 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:51:38] 2025-11-27 01:51:31,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140255884945216)>', '<ExcThread(monitor, started 140255311165184)>']
[2025-11-26 20:51:38] 2025-11-27 01:51:35,752 | INFO     | PID=311210 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 20:51:38] 2025-11-27 01:51:35,752 | INFO     | .. there are 95 such processes running
[2025-11-26 20:51:38] 2025-11-27 01:51:35,753 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:51:38] 2025-11-27 01:51:35,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:51:38] 2025-11-27 01:51:35,754 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:51:38] 2025-11-27 01:51:35,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:51:38] 2025-11-27 01:51:35,754 | INFO     | [monitor] control thread has ended
[2025-11-26 20:51:38] 2025-11-27 01:51:36,767 | INFO     | all workflow threads have been joined
[2025-11-26 20:51:38] 2025-11-27 01:51:36,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:51:38] 2025-11-27 01:51:36,768 | INFO     | traces error code: 0
[2025-11-26 20:51:38] 2025-11-27 01:51:36,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:51:38] 2025-11-27 01:51:37,380 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:51:38] 2025-11-27 01:51:37,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:51:38] 2025-11-27 01:51:37,437 [wrapper] pilotpid: 311210
[2025-11-26 20:51:38] 2025-11-27 01:51:37,458 [wrapper] Pilot exit status: 0
[2025-11-26 20:51:38] 2025-11-27 01:51:37,573 [wrapper] pandaids: 6891571132
[2025-11-26 20:51:38] 2025-11-27 01:51:37,958 [wrapper] cleanup supervisor_pilot 1034459 311211
[2025-11-26 20:51:38] 2025-11-27 01:51:37,982 [wrapper] Test setup, not cleaning
[2025-11-26 20:51:38] 2025-11-27 01:51:37,996 [wrapper] apfmon messages muted
[2025-11-26 20:51:38] 2025-11-27 01:51:38,039 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:51:38] 2025-11-27 01:51:38,058 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:51:38]  *** Error codes and diagnostics ***
[2025-11-26 20:51:38]     "exeErrorCode": 0,
[2025-11-26 20:51:38]     "exeErrorDiag": "",
[2025-11-26 20:51:38]     "pilotErrorCode": 0,
[2025-11-26 20:51:38]     "pilotErrorDiag": "",
[2025-11-26 20:51:38]  *** Listing of results directory ***
[2025-11-26 20:51:38] total 1316068
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:45 queuedata.json
[2025-11-26 20:51:38] -rwx------. 1 boincer umatlas     36292 Nov 18 10:45 runpilot2-wrapper.sh
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:51:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-26 20:51:38] -rw-r--r--. 2 boincer umatlas 407314022 Nov 26 00:04 EVNT.47493065._000267.pool.root.1
[2025-11-26 20:51:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-26 20:51:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 20:51:38] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:04 input.tar.gz
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas      2772 Nov 26 00:04 pandaJob.out
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas    991877 Nov 26 00:05 agis_schedconf.cvmfs.json
[2025-11-26 20:51:38] drwx------. 5 boincer umatlas      4096 Nov 26 00:05 pilot3
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:34 boinc_task_state.xml
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas      6884 Nov 26 20:48 init_data.xml
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas 914729560 Nov 26 20:49 HITS.47493068._002668.pool.root.1
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas      1060 Nov 26 20:50 memory_monitor_summary.json
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:50 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas   2357018 Nov 26 20:50 log.47493068._002668.job.log.tgz.1
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas      8621 Nov 26 20:51 heartbeat.json
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:51 wrapper_checkpoint.txt
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas        95 Nov 26 20:51 pilot_heartbeat.json
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas      5009 Nov 26 20:51 pilotlog.txt
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas   8489991 Nov 26 20:51 log.47493068._002668.job.log.1
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas       353 Nov 26 20:51 output.list
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:51 boinc_mmap_file
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:51 runtime_log
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas  10864640 Nov 26 20:51 result.tar.gz
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas       660 Nov 26 20:51 TUPODmb4cf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZfFKDmVF1qWm.diag
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas      8704 Nov 26 20:51 runtime_log.err
[2025-11-26 20:51:38] -rw-r--r--. 1 boincer umatlas     21319 Nov 26 20:51 stderr.txt
[2025-11-26 20:51:38] HITS file was successfully produced:
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas 914729560 Nov 26 20:49 shared/HITS.pool.root.1
[2025-11-26 20:51:38]  *** Contents of shared directory: ***
[2025-11-26 20:51:38] total 1302276
[2025-11-26 20:51:38] -rw-r--r--. 2 boincer umatlas 407314022 Nov 26 00:04 ATLAS.root_0
[2025-11-26 20:51:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 00:04 start_atlas.sh
[2025-11-26 20:51:38] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 00:04 input.tar.gz
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas 914729560 Nov 26 20:49 HITS.pool.root.1
[2025-11-26 20:51:38] -rw-------. 1 boincer umatlas  10864640 Nov 26 20:51 result.tar.gz
20:51:40 (305768): run_atlas exited; CPU time 270987.062793
20:51:40 (305768): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN