Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:39 (3227584): wrapper (7.7.26015): starting
00:12:39 (3227584): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:12:39] Arguments: --nthreads 8
[2025-11-26 00:12:39] Threads: 8
[2025-11-26 00:12:39] Checking for CVMFS
[2025-11-26 00:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:12:42] 2.13.3.0 14259 28176 343856 153310 1 87 28379997 32935936 24992 16776704 0 164579821 99.792 87205910 34016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:12:42] CVMFS is ok
[2025-11-26 00:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:12:42] Further information can be found at the LHC@home message board.
[2025-11-26 00:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:12:42] Checking for apptainer binary...
[2025-11-26 00:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:12:42] Running /usr/bin/apptainer --version
[2025-11-26 00:12:42] apptainer version 1.4.4-1.el9
[2025-11-26 00:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:12:43] c-4-36.aglt2.org
[2025-11-26 00:12:43] apptainer works
[2025-11-26 00:12:44] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:12:44] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:12:44] Starting ATLAS job with PandaID=6895883653
[2025-11-26 00:12:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:06:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:06:59] 2025-11-27 07:06:12,468 | INFO     | time since job start (93144s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:12,475 | INFO     | monitor loop #5608: job 0:6895883653 is in state 'finished'
[2025-11-27 02:06:59] 2025-11-27 07:06:12,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:06:59] 2025-11-27 07:06:14,492 | INFO     | time since job start (93146s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:14,982 | INFO     | monitor loop #5609: job 0:6895883653 is in state 'finished'
[2025-11-27 02:06:59] 2025-11-27 07:06:14,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:06:59] 2025-11-27 07:06:16,502 | INFO     | time since job start (93148s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:17,489 | INFO     | monitor loop #5610: job 0:6895883653 is in state 'finished'
[2025-11-27 02:06:59] 2025-11-27 07:06:17,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:06:59] 2025-11-27 07:06:18,513 | INFO     | time since job start (93150s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:20,009 | INFO     | monitor loop #5611: job 0:6895883653 is in state 'finished'
[2025-11-27 02:06:59] 2025-11-27 07:06:20,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:06:59] 2025-11-27 07:06:20,538 | INFO     | time since job start (93152s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:22,518 | INFO     | monitor loop #5612: job 0:6895883653 is in state 'finished'
[2025-11-27 02:06:59] 2025-11-27 07:06:22,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:06:59] 2025-11-27 07:06:22,547 | INFO     | time since job start (93154s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,077 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:06:59] 2025-11-27 07:06:24,085 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.019225000001
[2025-11-27 02:06:59] 2025-11-27 07:06:24,092 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895883653/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,093 | INFO     | extracted standard info from prmon json
[2025-11-27 02:06:59] 2025-11-27 07:06:24,093 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:06:59] 2025-11-27 07:06:24,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:06:59] 2025-11-27 07:06:24,152 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:06:59] 2025-11-27 07:06:24,160 | INFO     | sum of square deviations: 1097519952232.9127
[2025-11-27 02:06:59] 2025-11-27 07:06:24,351 | INFO     | sum of deviations: 4535723967380.089
[2025-11-27 02:06:59] 2025-11-27 07:06:24,351 | INFO     | mean x: 1764180624.5813649
[2025-11-27 02:06:59] 2025-11-27 07:06:24,351 | INFO     | mean y: 2900978.6161417323
[2025-11-27 02:06:59] 2025-11-27 07:06:24,351 | INFO     | intersect: -7287933530.060876
[2025-11-27 02:06:59] 2025-11-27 07:06:24,353 | INFO     | chi2: 21.75017468510807
[2025-11-27 02:06:59] 2025-11-27 07:06:24,363 | INFO     | sum of square deviations: 1086753443366.18
[2025-11-27 02:06:59] 2025-11-27 07:06:24,464 | INFO     | sum of deviations: 5033139971842.848
[2025-11-27 02:06:59] 2025-11-27 07:06:24,465 | INFO     | mean x: 1764180472.0882158
[2025-11-27 02:06:59] 2025-11-27 07:06:24,465 | INFO     | mean y: 2908022.762343647
[2025-11-27 02:06:59] 2025-11-27 07:06:24,465 | INFO     | intersect: -8167636368.712747
[2025-11-27 02:06:59] 2025-11-27 07:06:24,467 | INFO     | chi2: 18.66042092419839
[2025-11-27 02:06:59] 2025-11-27 07:06:24,467 | INFO     | current chi2=18.66042092419839 (change=14.20565032530601 %)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,467 | INFO     | right removable region: 1518
[2025-11-27 02:06:59] 2025-11-27 07:06:24,473 | INFO     | sum of square deviations: 1086751508446.1793
[2025-11-27 02:06:59] 2025-11-27 07:06:24,572 | INFO     | time since job start (93156s) is within the limit (172800.0s)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,636 | INFO     | sum of deviations: 3911215047893.3174
[2025-11-27 02:06:59] 2025-11-27 07:06:24,636 | INFO     | mean x: 1764180777.0882158
[2025-11-27 02:06:59] 2025-11-27 07:06:24,636 | INFO     | mean y: 2909821.8782093483
[2025-11-27 02:06:59] 2025-11-27 07:06:24,636 | INFO     | intersect: -6346370900.46208
[2025-11-27 02:06:59] 2025-11-27 07:06:24,638 | INFO     | chi2: 17.526111453295027
[2025-11-27 02:06:59] 2025-11-27 07:06:24,639 | INFO     | current chi2=17.526111453295027 (change=19.420824397815895 %)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,639 | INFO     | left removable region: 10
[2025-11-27 02:06:59] 2025-11-27 07:06:24,651 | INFO     | sum of square deviations: 1063311623326.8628
[2025-11-27 02:06:59] 2025-11-27 07:06:24,801 | INFO     | sum of deviations: 4005861424429.6543
[2025-11-27 02:06:59] 2025-11-27 07:06:24,801 | INFO     | mean x: 1764180746.6034484
[2025-11-27 02:06:59] 2025-11-27 07:06:24,801 | INFO     | mean y: 2925396.797082228
[2025-11-27 02:06:59] 2025-11-27 07:06:24,801 | INFO     | intersect: -6643351615.043538
[2025-11-27 02:06:59] 2025-11-27 07:06:24,812 | INFO     | chi2: 11.260686267512323
[2025-11-27 02:06:59] 2025-11-27 07:06:24,812 | INFO     | current memory leak: 3.77 B/s (using 1508 data points, chi2=11.26)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,817 | INFO     | could have reported an average CPU frequency of 2600 MHz (54 samples)
[2025-11-27 02:06:59] 2025-11-27 07:06:24,818 | INFO     | ..............................
[2025-11-27 02:06:59] 2025-11-27 07:06:24,818 | INFO     | . Timing measurements:
[2025-11-27 02:06:59] 2025-11-27 07:06:24,818 | INFO     | . get job = 0 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,818 | INFO     | . initial setup = 5 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,818 | INFO     | . payload setup = 42 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,818 | INFO     | . stage-in = 1 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,819 | INFO     | . payload execution = 92992 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,819 | INFO     | . stage-out = 16 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,819 | INFO     | . log creation = 5 s
[2025-11-27 02:06:59] 2025-11-27 07:06:24,819 | INFO     | ..............................
[2025-11-27 02:06:59] 2025-11-27 07:06:25,531 | INFO     | 
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | job summary report
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | --------------------------------------------------
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | PanDA job id: 6895883653
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | task id: 47556149
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | errors: (none)
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | pilot state: finished 
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | transexitcode: 0
[2025-11-27 02:06:59] 2025-11-27 07:06:25,532 | INFO     | exeerrorcode: 0
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | exeerrordiag: 
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | exitcode: 0
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | exitmsg: OK
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | cpuconsumptiontime: 297225 s
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | nevents: 1000
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | neventsw: 0
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | pid: 3248129
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | pgrp: 3248129
[2025-11-27 02:06:59] 2025-11-27 07:06:25,533 | INFO     | corecount: 8
[2025-11-27 02:06:59] 2025-11-27 07:06:25,534 | INFO     | event service: False
[2025-11-27 02:06:59] 2025-11-27 07:06:25,534 | INFO     | sizes: {0: 2283486, 1: 2284087, 2: 2284199, 3: 2284398, 4: 2284398, 15: 2284426, 26: 2284582, 32: 2284872, 36: 2284900, 93040: 2353125, 93041: 2353124, 93058: 2362
[2025-11-27 02:06:59] 2025-11-27 07:06:25,534 | INFO     | --------------------------------------------------
[2025-11-27 02:06:59] 2025-11-27 07:06:25,534 | INFO     | 
[2025-11-27 02:06:59] 2025-11-27 07:06:25,534 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 02:06:59] 2025-11-27 07:06:25,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:06:59] 2025-11-27 07:06:25,621 | INFO     | job 6895883653 has completed (purged errors)
[2025-11-27 02:06:59] 2025-11-27 07:06:25,621 | INFO     | overall cleanup function is called
[2025-11-27 02:06:59] 2025-11-27 07:06:26,657 | INFO     | --- collectZombieJob: --- 10, [3248129]
[2025-11-27 02:06:59] 2025-11-27 07:06:26,657 | INFO     | zombie collector waiting for pid 3248129
[2025-11-27 02:06:59] 2025-11-27 07:06:26,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:06:59] 2025-11-27 07:06:26,658 | INFO     | collected zombie processes
[2025-11-27 02:06:59] 2025-11-27 07:06:26,658 | INFO     | will attempt to kill all subprocesses of pid=3248129
[2025-11-27 02:06:59] 2025-11-27 07:06:28,118 | INFO     | process IDs to be killed: [3248129] (in reverse order)
[2025-11-27 02:06:59] 2025-11-27 07:06:28,588 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:06:59] 2025-11-27 07:06:28,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:06:59] 2025-11-27 07:06:28,626 | INFO     | did not find any defunct processes belonging to 3248129
[2025-11-27 02:06:59] 2025-11-27 07:06:28,661 | INFO     | did not find any defunct processes belonging to 3248129
[2025-11-27 02:06:59] 2025-11-27 07:06:28,665 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:06:59] 2025-11-27 07:06:28,665 | INFO     | ready for new job
[2025-11-27 02:06:59] 2025-11-27 07:06:28,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:06:59] 2025-11-27 07:06:28,679 | INFO     | ***************************************
[2025-11-27 02:06:59] 2025-11-27 07:06:28,680 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:06:59] 2025-11-27 07:06:28,680 | INFO     | ***************************************
[2025-11-27 02:06:59] 2025-11-27 07:06:28,680 | INFO     | 
[2025-11-27 02:06:59] 2025-11-27 07:06:28,682 | INFO     | architecture information:
[2025-11-27 02:06:59] 2025-11-27 07:06:28,685 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:06:59] 2025-11-27 07:06:28,742 | INFO     | cat /etc/os-release:
[2025-11-27 02:06:59] NAME="CentOS Linux"
[2025-11-27 02:06:59] VERSION="7 (Core)"
[2025-11-27 02:06:59] ID="centos"
[2025-11-27 02:06:59] ID_LIKE="rhel fedora"
[2025-11-27 02:06:59] VERSION_ID="7"
[2025-11-27 02:06:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:06:59] ANSI_COLOR="0;31"
[2025-11-27 02:06:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:06:59] HOME_URL="https://www.centos.org/"
[2025-11-27 02:06:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:06:59] 
[2025-11-27 02:06:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:06:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:06:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:06:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:06:59] 
[2025-11-27 02:06:59] 2025-11-27 07:06:28,742 | INFO     | ***************************************
[2025-11-27 02:06:59] 2025-11-27 07:06:29,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 02:06:59] 2025-11-27 07:06:29,317 | INFO     | sufficient remaining disk space (71464648704 B)
[2025-11-27 02:06:59] 2025-11-27 07:06:29,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:06:59] 2025-11-27 07:06:29,317 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:06:59] 2025-11-27 07:06:29,317 | INFO     | update_server=False
[2025-11-27 02:06:59] 2025-11-27 07:06:29,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:06:59] 2025-11-27 07:06:29,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:06:59] 2025-11-27 07:06:29,318 | INFO     | aborting loop
[2025-11-27 02:06:59] 2025-11-27 07:06:29,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:06:59] 2025-11-27 07:06:29,389 | INFO     | all data control threads have been joined
[2025-11-27 02:06:59] 2025-11-27 07:06:30,027 | INFO     | all payload control threads have been joined
[2025-11-27 02:06:59] 2025-11-27 07:06:30,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:06:59] 2025-11-27 07:06:30,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:06:59] 2025-11-27 07:06:30,323 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:30,324 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:30,395 | INFO     | [data] control thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:30,620 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:30,621 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:30,988 | INFO     | all job control threads have been joined
[2025-11-27 02:06:59] 2025-11-27 07:06:31,032 | INFO     | [payload] control thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,085 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,086 | INFO     | [job] validate thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,161 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,326 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,327 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,348 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,673 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:31,994 | INFO     | [job] control thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:34,297 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:06:59] 2025-11-27 07:06:35,737 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:06:59] 2025-11-27 07:06:36,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628584396608)>', '<ExcThread(monitor, started 140627941508864)>']
[2025-11-27 02:06:59] 2025-11-27 07:06:41,551 | INFO     | all workflow threads have been joined
[2025-11-27 02:06:59] 2025-11-27 07:06:41,551 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:06:59] 2025-11-27 07:06:41,551 | INFO     | traces error code: 0
[2025-11-27 02:06:59] 2025-11-27 07:06:41,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:06:59] 2025-11-27 07:06:58,723 | INFO     | PID=3232389 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:06:59] 2025-11-27 07:06:58,723 | INFO     | .. there are 42 such processes running
[2025-11-27 02:06:59] 2025-11-27 07:06:58,723 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:06:59] 2025-11-27 07:06:58,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:06:59] 2025-11-27 07:06:58,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:06:59] 2025-11-27 07:06:58,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:06:59] 2025-11-27 07:06:58,724 | INFO     | [monitor] control thread has ended
[2025-11-27 02:06:59] 2025-11-27 07:06:58,932 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:06:59] 2025-11-27 07:06:58,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:06:59] 2025-11-27 07:06:59,016 [wrapper] pilotpid: 3232389
[2025-11-27 02:06:59] 2025-11-27 07:06:59,037 [wrapper] Pilot exit status: 0
[2025-11-27 02:06:59] 2025-11-27 07:06:59,147 [wrapper] pandaids: 6895883653
[2025-11-27 02:06:59] 2025-11-27 07:06:59,271 [wrapper] cleanup supervisor_pilot 1108767 3232390
[2025-11-27 02:06:59] 2025-11-27 07:06:59,274 [wrapper] Test setup, not cleaning
[2025-11-27 02:06:59] 2025-11-27 07:06:59,277 [wrapper] apfmon messages muted
[2025-11-27 02:06:59] 2025-11-27 07:06:59,279 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:06:59] 2025-11-27 07:06:59,282 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:06:59]  *** Error codes and diagnostics ***
[2025-11-27 02:06:59]     "exeErrorCode": 0,
[2025-11-27 02:06:59]     "exeErrorDiag": "",
[2025-11-27 02:06:59]     "pilotErrorCode": 0,
[2025-11-27 02:06:59]     "pilotErrorDiag": "",
[2025-11-27 02:06:59]  *** Listing of results directory ***
[2025-11-27 02:06:59] total 1326676
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:01 queuedata.json
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-27 02:06:59] -rwx------. 1 boincer umatlas     36292 Nov 24 12:04 runpilot2-wrapper.sh
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:06:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:12 run_atlas
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:12 job.xml
[2025-11-27 02:06:59] -rw-r--r--. 2 boincer umatlas 409519141 Nov 26 00:12 EVNT.47483658._001397.pool.root.1
[2025-11-27 02:06:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:12 start_atlas.sh
[2025-11-27 02:06:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:12 shared
[2025-11-27 02:06:59] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:12 input.tar.gz
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:12 boinc_lockfile
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:12 pandaJob.out
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas        57 Nov 26 00:12 setup.sh.local
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas    991877 Nov 26 00:13 agis_schedconf.cvmfs.json
[2025-11-27 02:06:59] drwx------. 5 boincer umatlas      4096 Nov 26 00:13 pilot3
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas       533 Nov 27 01:33 boinc_task_state.xml
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas 916493559 Nov 27 02:03 HITS.47556149._003836.pool.root.1
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas      6661 Nov 27 02:04 init_data.xml
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas      1059 Nov 27 02:05 memory_monitor_summary.json
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:05 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas   2526299 Nov 27 02:05 log.47556149._003836.job.log.tgz.1
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas        95 Nov 27 02:06 pilot_heartbeat.json
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas      8618 Nov 27 02:06 heartbeat.json
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:06 boinc_mmap_file
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:06 wrapper_checkpoint.txt
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas       823 Nov 27 02:06 pilotlog.txt
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas  11766714 Nov 27 02:06 log.47556149._003836.job.log.1
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas       353 Nov 27 02:06 output.list
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:06 runtime_log
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas  14315520 Nov 27 02:06 result.tar.gz
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 02:06 runtime_log.err
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas       658 Nov 27 02:06 McJNDmAAph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFnLKDmTI3E1n.diag
[2025-11-27 02:06:59] -rw-r--r--. 1 boincer umatlas     21815 Nov 27 02:06 stderr.txt
[2025-11-27 02:06:59] HITS file was successfully produced:
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas 916493559 Nov 27 02:03 shared/HITS.pool.root.1
[2025-11-27 02:06:59]  *** Contents of shared directory: ***
[2025-11-27 02:06:59] total 1309520
[2025-11-27 02:06:59] -rw-r--r--. 2 boincer umatlas 409519141 Nov 26 00:12 ATLAS.root_0
[2025-11-27 02:06:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:12 start_atlas.sh
[2025-11-27 02:06:59] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 00:12 input.tar.gz
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas 916493559 Nov 27 02:03 HITS.pool.root.1
[2025-11-27 02:06:59] -rw-------. 1 boincer umatlas  14315520 Nov 27 02:06 result.tar.gz
02:07:01 (3227584): run_atlas exited; CPU time 300893.673282
02:07:01 (3227584): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN