Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
04:48:28 (1404643): wrapper (7.7.26015): starting
04:48:28 (1404643): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 04:48:28] Arguments: --nthreads 12
[2025-11-26 04:48:28] Threads: 12
[2025-11-26 04:48:28] Checking for CVMFS
[2025-11-26 04:48:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 04:48:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 04:48:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 04:48:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 04:48:28] 2.13.2.0 3658817 1704 63764 153318 0 81 12261613 16777217 1038 130560 0 2281492 99.992 69312 1219 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-26 04:48:28] CVMFS is ok
[2025-11-26 04:48:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 04:48:28] Checking for apptainer binary...
[2025-11-26 04:48:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 04:48:28] Running /usr/bin/apptainer --version
[2025-11-26 04:48:28] apptainer version 1.3.0-bp160.1.36
[2025-11-26 04:48:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 04:48:28] boinc-runner
[2025-11-26 04:48:28] apptainer works
[2025-11-26 04:48:28] Set ATHENA_PROC_NUMBER=12
[2025-11-26 04:48:28] Set ATHENA_CORE_NUMBER=12
[2025-11-26 04:48:28] Starting ATLAS job with PandaID=6897863669
[2025-11-26 04:48:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:41:04]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:41:04] 2025-11-26 13:30:46,956 | INFO     | time since job start (9731s) is within the limit (172800.0s)
[2025-11-26 07:41:04] 2025-11-26 13:30:47,365 | INFO     | monitor loop #739: job 0:6897863669 is in state 'finished'
[2025-11-26 07:41:04] 2025-11-26 13:30:47,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,195 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 07:41:04] 2025-11-26 13:30:48,198 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4168.371687500001
[2025-11-26 07:41:04] 2025-11-26 13:30:48,201 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6897863669/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,201 | INFO     | extracted standard info from prmon json
[2025-11-26 07:41:04] 2025-11-26 13:30:48,201 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:41:04] 2025-11-26 13:30:48,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:41:04] 2025-11-26 13:30:48,203 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:41:04] 2025-11-26 13:30:48,203 | INFO     | sum of square deviations: 1270051720.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,203 | INFO     | sum of deviations: 42384490828.5
[2025-11-26 07:41:04] 2025-11-26 13:30:48,203 | INFO     | mean x: 1764158982.5
[2025-11-26 07:41:04] 2025-11-26 13:30:48,203 | INFO     | mean y: 3459544.90625
[2025-11-26 07:41:04] 2025-11-26 13:30:48,203 | INFO     | intersect: -58870505220.707504
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | chi2: 4.005637521233804
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | sum of square deviations: 1154663510.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | sum of deviations: 87040837963.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | mean x: 1764158830.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | mean y: 3517843.470967742
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | intersect: -132982292769.89609
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | chi2: 1.6073507830103355
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | current chi2=1.6073507830103355 (change=59.87278493149214 %)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,204 | INFO     | sum of square deviations: 1046484737.5
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | sum of deviations: 81719424852.50003
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | mean x: 1764158677.5
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | mean y: 3510343.22
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | intersect: -137758682747.38596
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | chi2: 1.6075871067220462
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | current chi2=1.6075871067220462 (change=-0.014702684330552475 %)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | right removable region: 149
[2025-11-26 07:41:04] 2025-11-26 13:30:48,205 | INFO     | sum of square deviations: 1154663510.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | sum of deviations: 5567261013.999994
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | mean x: 1764159135.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | mean y: 3507550.0129032256
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | intersect: -8502463488.05814
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | chi2: 2.485676128225096
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | current chi2=2.485676128225096 (change=37.94555510705656 %)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | sum of square deviations: 1046484737.5
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | sum of deviations: 1054554580.0000076
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | mean x: 1764159287.5
[2025-11-26 07:41:04] 2025-11-26 13:30:48,206 | INFO     | mean y: 3513887.7333333334
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | intersect: -1774249504.140956
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | chi2: 2.486518609685652
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | current chi2=2.486518609685652 (change=-0.033893452609912354 %)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | left removable region: 20
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | sum of square deviations: 665612480.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | sum of deviations: 32212518941.000004
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | mean x: 1764159257.0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | mean y: 3585133.6434108526
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | intersect: -85373440070.35065
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | chi2: 0.007406450163466386
[2025-11-26 07:41:04] 2025-11-26 13:30:48,207 | INFO     | current memory leak: 48.40 B/s (using 129 data points, chi2=0.01)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | could have reported an average CPU frequency of 4081 MHz (9 samples)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | ..............................
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . Timing measurements:
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . get job = 0 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . initial setup = 2 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . payload setup = 3 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . stage-in = 0 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . payload execution = 9705 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . stage-out = 1 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | . log creation = 0 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,208 | INFO     | ..............................
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | 
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | job summary report
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | --------------------------------------------------
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | PanDA job id: 6897863669
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | task id: 47556173
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | errors: (none)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | pilot state: finished 
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | transexitcode: 0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | exeerrorcode: 0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | exeerrordiag: 
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | exitcode: 0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | exitmsg: OK
[2025-11-26 07:41:04] 2025-11-26 13:30:48,248 | INFO     | cpuconsumptiontime: 113086 s
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | nevents: 1000
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | neventsw: 0
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | pid: 1415428
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | pgrp: 1415428
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | corecount: 12
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | event service: False
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | sizes: {0: 2284263, 2: 2284525, 11: 2284553, 9712: 2314151, 9713: 2323145, 9715: 2323201, 9720: 2323639}
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | --------------------------------------------------
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | 
[2025-11-26 07:41:04] 2025-11-26 13:30:48,249 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-26 07:41:04] 2025-11-26 13:30:48,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | job 6897863669 has completed (purged errors)
[2025-11-26 07:41:04] 2025-11-26 13:30:48,267 | INFO     | overall cleanup function is called
[2025-11-26 07:41:04] 2025-11-26 13:30:49,281 | INFO     | --- collectZombieJob: --- 10, [1415428]
[2025-11-26 07:41:04] 2025-11-26 13:30:49,281 | INFO     | zombie collector waiting for pid 1415428
[2025-11-26 07:41:04] 2025-11-26 13:30:49,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:41:04] 2025-11-26 13:30:49,281 | INFO     | collected zombie processes
[2025-11-26 07:41:04] 2025-11-26 13:30:49,281 | INFO     | will attempt to kill all subprocesses of pid=1415428
[2025-11-26 07:41:04] 2025-11-26 13:30:49,356 | INFO     | process IDs to be killed: [1415428] (in reverse order)
[2025-11-26 07:41:04] 2025-11-26 13:30:49,397 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:41:04] 2025-11-26 13:30:49,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:41:04] 2025-11-26 13:30:49,400 | INFO     | did not find any defunct processes belonging to 1415428
[2025-11-26 07:41:04] 2025-11-26 13:30:49,402 | INFO     | did not find any defunct processes belonging to 1415428
[2025-11-26 07:41:04] 2025-11-26 13:30:49,403 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:41:04] 2025-11-26 13:30:49,403 | INFO     | ready for new job
[2025-11-26 07:41:04] 2025-11-26 13:30:49,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:41:04] 2025-11-26 13:30:49,405 | INFO     | ***************************************
[2025-11-26 07:41:04] 2025-11-26 13:30:49,405 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:41:04] 2025-11-26 13:30:49,405 | INFO     | ***************************************
[2025-11-26 07:41:04] 2025-11-26 13:30:49,405 | INFO     | 
[2025-11-26 07:41:04] 2025-11-26 13:30:49,406 | INFO     | architecture information:
[2025-11-26 07:41:04] 2025-11-26 13:30:49,407 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:41:04] 2025-11-26 13:30:49,415 | INFO     | cat /etc/os-release:
[2025-11-26 07:41:04] NAME="CentOS Linux"
[2025-11-26 07:41:04] VERSION="7 (Core)"
[2025-11-26 07:41:04] ID="centos"
[2025-11-26 07:41:04] ID_LIKE="rhel fedora"
[2025-11-26 07:41:04] VERSION_ID="7"
[2025-11-26 07:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:41:04] ANSI_COLOR="0;31"
[2025-11-26 07:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:41:04] HOME_URL="https://www.centos.org/"
[2025-11-26 07:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:41:04] 
[2025-11-26 07:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:41:04] 
[2025-11-26 07:41:04] 2025-11-26 13:30:49,415 | INFO     | ***************************************
[2025-11-26 07:41:04] 2025-11-26 13:30:49,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-26 07:41:04] 2025-11-26 13:30:49,931 | INFO     | sufficient remaining disk space (3850522066944 B)
[2025-11-26 07:41:04] 2025-11-26 13:30:49,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:41:04] 2025-11-26 13:30:49,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:41:04] 2025-11-26 13:30:49,931 | INFO     | update_server=False
[2025-11-26 07:41:04] 2025-11-26 13:30:49,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:41:04] 2025-11-26 13:30:49,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:41:04] 2025-11-26 13:30:49,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:41:04] 2025-11-26 13:30:49,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:41:04] 2025-11-26 13:30:50,431 | INFO     | all data control threads have been joined
[2025-11-26 07:41:04] 2025-11-26 13:30:50,623 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:41:04] 2025-11-26 13:30:50,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:41:04] 2025-11-26 13:30:50,873 | INFO     | aborting loop
[2025-11-26 07:41:04] 2025-11-26 13:30:50,937 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:50,937 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,111 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,422 | INFO     | all payload control threads have been joined
[2025-11-26 07:41:04] 2025-11-26 13:30:51,437 | INFO     | [data] control thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,588 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,596 | INFO     | [job] validate thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,635 | INFO     | all job control threads have been joined
[2025-11-26 07:41:04] 2025-11-26 13:30:51,873 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,878 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,902 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:51,937 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:52,021 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:52,332 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:52,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:52,427 | INFO     | [payload] control thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:52,640 | INFO     | [job] control thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:53,937 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:41:04] 2025-11-26 13:30:55,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662798997312)>', '<ExcThread(monitor, started 140662318032640)>']
[2025-11-26 07:41:04] 2025-11-26 13:31:00,498 | INFO     | all workflow threads have been joined
[2025-11-26 07:41:04] 2025-11-26 13:31:00,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:41:04] 2025-11-26 13:31:00,498 | INFO     | traces error code: 0
[2025-11-26 07:41:04] 2025-11-26 13:31:00,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:41:04] 2025-11-26 13:31:20,133 | INFO     | PID=1408541 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:41:04] 2025-11-26 13:31:20,133 | INFO     | .. there are 2 such processes running
[2025-11-26 07:41:04] 2025-11-26 13:31:20,133 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:41:04] 2025-11-26 13:31:20,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:41:04] 2025-11-26 13:31:20,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:41:04] 2025-11-26 13:31:20,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:41:04] 2025-11-26 13:31:20,134 | INFO     | [monitor] control thread has ended
[2025-11-26 07:41:04] 2025-11-26 13:31:20,220 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:41:04] 2025-11-26 13:31:20,223 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:41:04] 2025-11-26 13:31:20,225 [wrapper] pilotpid: 1408541
[2025-11-26 07:41:04] 2025-11-26 13:31:20,227 [wrapper] Pilot exit status: 0
[2025-11-26 07:41:04] 2025-11-26 13:31:20,235 [wrapper] pandaids: 6897863669
[2025-11-26 07:41:04] 2025-11-26 13:31:20,257 [wrapper] cleanup supervisor_pilot 1573900 1408542
[2025-11-26 07:41:04] 2025-11-26 13:31:20,261 [wrapper] Test setup, not cleaning
[2025-11-26 07:41:04] 2025-11-26 13:31:20,263 [wrapper] apfmon messages muted
[2025-11-26 07:41:04] 2025-11-26 13:31:20,268 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:41:04] 2025-11-26 13:31:20,270 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:41:04]  *** Error codes and diagnostics ***
[2025-11-26 07:41:04]     "exeErrorCode": 0,
[2025-11-26 07:41:04]     "exeErrorDiag": "",
[2025-11-26 07:41:04]     "pilotErrorCode": 0,
[2025-11-26 07:41:04]     "pilotErrorDiag": "",
[2025-11-26 07:41:04]  *** Listing of results directory ***
[2025-11-26 07:41:04] total 1301496
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc    576529 Nov 25 10:48 pilot3.tar.gz
[2025-11-26 07:41:04] -rwx------. 1 boinc boinc     36292 Nov 25 11:02 runpilot2-wrapper.sh
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc      5112 Nov 25 11:02 queuedata.json
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc       100 Nov 26 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:41:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 04:48 run_atlas
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc       105 Nov 26 04:48 job.xml
[2025-11-26 07:41:04] -rw-r--r--. 2 boinc boinc 410269259 Nov 26 04:48 EVNT.47483658._003121.pool.root.1
[2025-11-26 07:41:04] -rw-r--r--. 2 boinc boinc     15847 Nov 26 04:48 start_atlas.sh
[2025-11-26 07:41:04] drwxrwx--x. 1 boinc boinc        76 Nov 26 04:48 shared
[2025-11-26 07:41:04] -rw-r--r--. 2 boinc boinc    590108 Nov 26 04:48 input.tar.gz
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc     10032 Nov 26 04:48 init_data.xml
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc         0 Nov 26 04:48 boinc_setup_complete
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc         0 Nov 26 04:48 boinc_lockfile
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc      2785 Nov 26 04:48 pandaJob.out
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc        63 Nov 26 04:48 setup.sh.local
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc    991827 Nov 26 04:48 agis_schedconf.cvmfs.json
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc   1516240 Nov 26 04:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:41:04] drwx------. 1 boinc boinc       414 Nov 26 04:48 pilot3
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc       531 Nov 26 07:27 boinc_task_state.xml
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc 911837547 Nov 26 07:30 HITS.47556173._000908.pool.root.1
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc      1043 Nov 26 07:30 memory_monitor_summary.json
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc   1927063 Nov 26 07:30 log.47556173._000908.job.log.tgz.1
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc        95 Nov 26 07:30 pilot_heartbeat.json
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc      8597 Nov 26 07:30 heartbeat.json
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc       822 Nov 26 07:31 pilotlog.txt
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc   1435340 Nov 26 07:31 log.47556173._000908.job.log.1
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc       353 Nov 26 07:31 output.list
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc       620 Nov 26 07:31 runtime_log
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc   3379200 Nov 26 07:31 result.tar.gz
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc       658 Nov 26 07:31 tamNDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLfMKDm0SXvRm.diag
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc      9396 Nov 26 07:31 runtime_log.err
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc      8192 Nov 26 07:41 boinc_mmap_file
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc        28 Nov 26 07:41 wrapper_checkpoint.txt
[2025-11-26 07:41:04] -rw-r--r--. 1 boinc boinc     20935 Nov 26 07:41 stderr.txt
[2025-11-26 07:41:04] HITS file was successfully produced:
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc 911837547 Nov 26 07:30 shared/HITS.pool.root.1
[2025-11-26 07:41:04]  *** Contents of shared directory: ***
[2025-11-26 07:41:04] total 1295020
[2025-11-26 07:41:04] -rw-r--r--. 2 boinc boinc 410269259 Nov 26 04:48 ATLAS.root_0
[2025-11-26 07:41:04] -rw-r--r--. 2 boinc boinc     15847 Nov 26 04:48 start_atlas.sh
[2025-11-26 07:41:04] -rw-r--r--. 2 boinc boinc    590108 Nov 26 04:48 input.tar.gz
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc 911837547 Nov 26 07:30 HITS.pool.root.1
[2025-11-26 07:41:04] -rw-------. 1 boinc boinc   3379200 Nov 26 07:31 result.tar.gz
07:41:06 (1404643): run_atlas exited; CPU time 113007.149319
07:41:06 (1404643): called boinc_finish(0)

</stderr_txt>
]]>

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