Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
02:02:53 (1215137): wrapper (7.7.26015): starting
02:02:53 (1215137): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 02:02:53] Arguments: --nthreads 12
[2025-11-26 02:02:53] Threads: 12
[2025-11-26 02:02:53] Checking for CVMFS
[2025-11-26 02:02:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 02:02:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 02:02:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 02:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 02:02:53] 2.13.2.0 3658817 1539 63784 153314 2 81 12226486 16777216 1038 130560 0 2056759 99.992 62596 1195 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-26 02:02:53] CVMFS is ok
[2025-11-26 02:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 02:02:53] Checking for apptainer binary...
[2025-11-26 02:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 02:02:53] Running /usr/bin/apptainer --version
[2025-11-26 02:02:53] apptainer version 1.3.0-bp160.1.36
[2025-11-26 02:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 02:02:53] boinc-runner
[2025-11-26 02:02:53] apptainer works
[2025-11-26 02:02:53] Set ATHENA_PROC_NUMBER=12
[2025-11-26 02:02:53] Set ATHENA_CORE_NUMBER=12
[2025-11-26 02:02:53] Starting ATLAS job with PandaID=6897759711
[2025-11-26 02:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:48:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:48:21] 2025-11-26 10:47:24,727 | INFO     | extracted standard info from prmon json
[2025-11-26 04:48:21] 2025-11-26 10:47:24,727 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 04:48:21] 2025-11-26 10:47:24,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:48:21] 2025-11-26 10:47:24,728 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:48:21] 2025-11-26 10:47:24,728 | INFO     | sum of square deviations: 1318277740.5
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | sum of deviations: 59104321208.5
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | mean x: 1764149107.5
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | mean y: 3490870.314814815
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | intersect: -79091249415.46231
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | chi2: 3.142960213326259
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | sum of square deviations: 1199940638.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | sum of deviations: 92939660938.99998
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | mean x: 1764148955.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | mean y: 3533810.694267516
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | intersect: -136636063625.45084
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | chi2: 1.6082525404044703
[2025-11-26 04:48:21] 2025-11-26 10:47:24,729 | INFO     | current chi2=1.6082525404044703 (change=48.830006387436136 %)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | sum of square deviations: 1088905998.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | sum of deviations: 86595834301.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | mean x: 1764148802.5
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | mean y: 3525095.4078947366
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | intersect: -140291355880.71616
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | chi2: 1.6091874429535662
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | current chi2=1.6091874429535662 (change=-0.05813157608075472 %)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | right removable region: 151
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | sum of square deviations: 1199940638.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | sum of deviations: 20946053363.999992
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | mean x: 1764149260.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | mean y: 3539410.9426751593
[2025-11-26 04:48:21] 2025-11-26 10:47:24,730 | INFO     | intersect: -30791287742.84949
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | chi2: 1.5918895827142043
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | current chi2=1.5918895827142043 (change=49.350628876415996 %)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | sum of square deviations: 1088905998.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | sum of deviations: 16094417784.499998
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | mean x: 1764149412.5
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | mean y: 3546052.0328947366
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | intersect: -26071209465.160267
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | chi2: 1.591218092737534
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | current chi2=1.591218092737534 (change=0.04218194427314061 %)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | left removable region: 20
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | sum of square deviations: 697054930.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | sum of deviations: 33158456555.000004
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | mean x: 1764149382.0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | mean y: 3603921.5038167937
[2025-11-26 04:48:21] 2025-11-26 10:47:24,731 | INFO     | intersect: -83915852238.96994
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | chi2: 0.007406615077942171
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | current memory leak: 47.57 B/s (using 131 data points, chi2=0.01)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | could have reported an average CPU frequency of 4099 MHz (9 samples)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | ..............................
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . Timing measurements:
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . get job = 0 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . initial setup = 2 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . payload setup = 2 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . stage-in = 0 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . payload execution = 9843 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . stage-out = 1 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | . log creation = 0 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,732 | INFO     | ..............................
[2025-11-26 04:48:21] 2025-11-26 10:47:24,759 | INFO     | 
[2025-11-26 04:48:21] 2025-11-26 10:47:24,759 | INFO     | job summary report
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | --------------------------------------------------
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | PanDA job id: 6897759711
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | task id: 47556173
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | errors: (none)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | pilot state: finished 
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | transexitcode: 0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | exeerrorcode: 0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | exeerrordiag: 
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | exitcode: 0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | exitmsg: OK
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | cpuconsumptiontime: 114705 s
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | nevents: 1000
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | neventsw: 0
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | pid: 1225910
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | pgrp: 1225910
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | corecount: 12
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | event service: False
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | sizes: {0: 2284149, 1: 2284291, 2: 2284553, 11: 2284581, 9849: 2314235, 9851: 2323413, 9853: 2323667}
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | --------------------------------------------------
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | 
[2025-11-26 04:48:21] 2025-11-26 10:47:24,760 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | job 6897759711 has completed (purged errors)
[2025-11-26 04:48:21] 2025-11-26 10:47:24,772 | INFO     | overall cleanup function is called
[2025-11-26 04:48:21] 2025-11-26 10:47:25,786 | INFO     | --- collectZombieJob: --- 10, [1225910]
[2025-11-26 04:48:21] 2025-11-26 10:47:25,786 | INFO     | zombie collector waiting for pid 1225910
[2025-11-26 04:48:21] 2025-11-26 10:47:25,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:48:21] 2025-11-26 10:47:25,786 | INFO     | collected zombie processes
[2025-11-26 04:48:21] 2025-11-26 10:47:25,786 | INFO     | will attempt to kill all subprocesses of pid=1225910
[2025-11-26 04:48:21] 2025-11-26 10:47:25,858 | INFO     | process IDs to be killed: [1225910] (in reverse order)
[2025-11-26 04:48:21] 2025-11-26 10:47:25,894 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:48:21] 2025-11-26 10:47:25,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:48:21] 2025-11-26 10:47:25,897 | INFO     | did not find any defunct processes belonging to 1225910
[2025-11-26 04:48:21] 2025-11-26 10:47:25,899 | INFO     | did not find any defunct processes belonging to 1225910
[2025-11-26 04:48:21] 2025-11-26 10:47:25,900 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:48:21] 2025-11-26 10:47:25,900 | INFO     | ready for new job
[2025-11-26 04:48:21] 2025-11-26 10:47:25,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:48:21] 2025-11-26 10:47:25,902 | INFO     | ***************************************
[2025-11-26 04:48:21] 2025-11-26 10:47:25,902 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:48:21] 2025-11-26 10:47:25,902 | INFO     | ***************************************
[2025-11-26 04:48:21] 2025-11-26 10:47:25,902 | INFO     | 
[2025-11-26 04:48:21] 2025-11-26 10:47:25,903 | INFO     | architecture information:
[2025-11-26 04:48:21] 2025-11-26 10:47:25,903 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:48:21] 2025-11-26 10:47:25,910 | INFO     | cat /etc/os-release:
[2025-11-26 04:48:21] NAME="CentOS Linux"
[2025-11-26 04:48:21] VERSION="7 (Core)"
[2025-11-26 04:48:21] ID="centos"
[2025-11-26 04:48:21] ID_LIKE="rhel fedora"
[2025-11-26 04:48:21] VERSION_ID="7"
[2025-11-26 04:48:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:48:21] ANSI_COLOR="0;31"
[2025-11-26 04:48:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:48:21] HOME_URL="https://www.centos.org/"
[2025-11-26 04:48:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:48:21] 
[2025-11-26 04:48:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:48:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:48:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:48:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:48:21] 
[2025-11-26 04:48:21] 2025-11-26 10:47:25,910 | INFO     | ***************************************
[2025-11-26 04:48:21] 2025-11-26 10:47:26,413 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-26 04:48:21] 2025-11-26 10:47:26,422 | INFO     | sufficient remaining disk space (3849642311680 B)
[2025-11-26 04:48:21] 2025-11-26 10:47:26,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:48:21] 2025-11-26 10:47:26,422 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:48:21] 2025-11-26 10:47:26,422 | INFO     | update_server=False
[2025-11-26 04:48:21] 2025-11-26 10:47:26,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:48:21] 2025-11-26 10:47:26,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:48:21] 2025-11-26 10:47:26,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:48:21] 2025-11-26 10:47:26,423 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 04:48:21] 2025-11-26 10:47:26,423 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:48:21] 2025-11-26 10:47:26,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:48:21] 2025-11-26 10:47:26,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:48:21] 2025-11-26 10:47:26,447 | INFO     | all job control threads have been joined
[2025-11-26 04:48:21] 2025-11-26 10:47:26,448 | INFO     | all data control threads have been joined
[2025-11-26 04:48:21] 2025-11-26 10:47:26,723 | WARNING  | process 1225910 can no longer be monitored (due to stat problems) - aborting
[2025-11-26 04:48:21] 2025-11-26 10:47:26,774 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 04:48:21] 2025-11-26 10:47:26,841 | INFO     | number of running child processes to parent process 1225910: 1
[2025-11-26 04:48:21] 2025-11-26 10:47:26,841 | INFO     | maximum number of monitored processes: 17
[2025-11-26 04:48:21] 2025-11-26 10:47:26,841 | INFO     | aborting job monitoring since job object (job id=6897759711) has expired
[2025-11-26 04:48:21] 2025-11-26 10:47:26,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:48:21] 2025-11-26 10:47:26,841 | INFO     | will abort loop
[2025-11-26 04:48:21] 2025-11-26 10:47:27,340 | INFO     | all payload control threads have been joined
[2025-11-26 04:48:21] 2025-11-26 10:47:27,428 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:27,428 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:27,452 | INFO     | [job] control thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:27,453 | INFO     | [data] control thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:27,846 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,170 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,185 | INFO     | [job] validate thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,185 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,220 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,345 | INFO     | [payload] control thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,369 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,428 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:48:21] 2025-11-26 10:47:28,720 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:28,810 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:32,692 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:36,670 | INFO     | job.realtimelogging is not enabled
[2025-11-26 04:48:21] 2025-11-26 10:47:37,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:48:21] 2025-11-26 10:47:56,688 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-11-26 04:48:21] 2025-11-26 10:48:14,950 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:48:21] 2025-11-26 10:48:16,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886802106176)>', '<ExcThread(monitor, started 139886313060096)>']
[2025-11-26 04:48:21] 2025-11-26 10:48:16,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:48:21] 2025-11-26 10:48:16,667 | INFO     | [monitor] control thread has ended
[2025-11-26 04:48:21] 2025-11-26 10:48:21,514 | INFO     | all workflow threads have been joined
[2025-11-26 04:48:21] 2025-11-26 10:48:21,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:48:21] 2025-11-26 10:48:21,514 | INFO     | traces error code: 0
[2025-11-26 04:48:21] 2025-11-26 10:48:21,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:48:21] 2025-11-26 10:48:21,590 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:48:21] 2025-11-26 10:48:21,591 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:48:21] 2025-11-26 10:48:21,593 [wrapper] pilotpid: 1219037
[2025-11-26 04:48:21] 2025-11-26 10:48:21,594 [wrapper] Pilot exit status: 0
[2025-11-26 04:48:21] 2025-11-26 10:48:21,599 [wrapper] pandaids: 6897759711
[2025-11-26 04:48:21] 2025-11-26 10:48:21,620 [wrapper] cleanup supervisor_pilot 1404201 1219038
[2025-11-26 04:48:21] 2025-11-26 10:48:21,622 [wrapper] Test setup, not cleaning
[2025-11-26 04:48:21] 2025-11-26 10:48:21,623 [wrapper] apfmon messages muted
[2025-11-26 04:48:21] 2025-11-26 10:48:21,624 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:48:21] 2025-11-26 10:48:21,625 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:48:21]  *** Error codes and diagnostics ***
[2025-11-26 04:48:21]     "exeErrorCode": 0,
[2025-11-26 04:48:21]     "exeErrorDiag": "",
[2025-11-26 04:48:21]     "pilotErrorCode": 0,
[2025-11-26 04:48:21]     "pilotErrorDiag": "",
[2025-11-26 04:48:21]  *** Listing of results directory ***
[2025-11-26 04:48:21] total 1325136
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc    576529 Nov 25 10:48 pilot3.tar.gz
[2025-11-26 04:48:21] -rwx------. 1 boinc boinc     36292 Nov 25 11:02 runpilot2-wrapper.sh
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc      5112 Nov 25 11:02 queuedata.json
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc       100 Nov 26 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:48:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 02:02 run_atlas
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc       105 Nov 26 02:02 job.xml
[2025-11-26 04:48:21] -rw-r--r--. 2 boinc boinc 410269259 Nov 26 02:02 EVNT.47483658._003121.pool.root.1
[2025-11-26 04:48:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:02 start_atlas.sh
[2025-11-26 04:48:21] drwxrwx--x. 1 boinc boinc        76 Nov 26 02:02 shared
[2025-11-26 04:48:21] -rw-r--r--. 2 boinc boinc    590108 Nov 26 02:02 input.tar.gz
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc     10032 Nov 26 02:02 init_data.xml
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:02 boinc_setup_complete
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc         0 Nov 26 02:02 boinc_lockfile
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc      2785 Nov 26 02:02 pandaJob.out
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc        63 Nov 26 02:02 setup.sh.local
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc    991877 Nov 26 02:02 agis_schedconf.cvmfs.json
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc   1516240 Nov 26 02:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:48:21] drwx------. 1 boinc boinc       414 Nov 26 02:02 pilot3
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc       531 Nov 26 04:43 boinc_task_state.xml
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc 936015629 Nov 26 04:47 HITS.47556173._000904.pool.root.1
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc        95 Nov 26 04:47 pilot_heartbeat.json
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc      1039 Nov 26 04:47 memory_monitor_summary.json
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc   1917446 Nov 26 04:47 log.47556173._000904.job.log.tgz.1
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc      8604 Nov 26 04:47 heartbeat.json
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc      8192 Nov 26 04:48 boinc_mmap_file
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc        28 Nov 26 04:48 wrapper_checkpoint.txt
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc      5148 Nov 26 04:48 pilotlog.txt
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc   1454529 Nov 26 04:48 log.47556173._000904.job.log.1
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc       353 Nov 26 04:48 output.list
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc       620 Nov 26 04:48 runtime_log
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc   3389440 Nov 26 04:48 result.tar.gz
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc      9396 Nov 26 04:48 runtime_log.err
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc       658 Nov 26 04:48 mqgNDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHfMKDmxwV8Uo.diag
[2025-11-26 04:48:21] -rw-r--r--. 1 boinc boinc     20828 Nov 26 04:48 stderr.txt
[2025-11-26 04:48:21] HITS file was successfully produced:
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc 936015629 Nov 26 04:47 shared/HITS.pool.root.1
[2025-11-26 04:48:21]  *** Contents of shared directory: ***
[2025-11-26 04:48:21] total 1318644
[2025-11-26 04:48:21] -rw-r--r--. 2 boinc boinc 410269259 Nov 26 02:02 ATLAS.root_0
[2025-11-26 04:48:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 02:02 start_atlas.sh
[2025-11-26 04:48:21] -rw-r--r--. 2 boinc boinc    590108 Nov 26 02:02 input.tar.gz
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc 936015629 Nov 26 04:47 HITS.pool.root.1
[2025-11-26 04:48:21] -rw-------. 1 boinc boinc   3389440 Nov 26 04:48 result.tar.gz
04:48:23 (1215137): run_atlas exited; CPU time 114598.449017
04:48:23 (1215137): called boinc_finish(0)

</stderr_txt>
]]>

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