Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
03:42:07 (1324855): wrapper (7.7.26015): starting
03:42:07 (1324855): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 03:42:07] Arguments: --nthreads 12
[2025-11-26 03:42:07] Threads: 12
[2025-11-26 03:42:07] Checking for CVMFS
[2025-11-26 03:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:42:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:42:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:42:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:42:07] 2.13.2.0 3658817 1638 64200 153316 3 81 12232290 16777217 1038 130560 0 2176903 99.993 65197 1198 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-26 03:42:07] CVMFS is ok
[2025-11-26 03:42:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:42:07] Checking for apptainer binary...
[2025-11-26 03:42:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:42:07] Running /usr/bin/apptainer --version
[2025-11-26 03:42:07] apptainer version 1.3.0-bp160.1.36
[2025-11-26 03:42:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:42:07] boinc-runner
[2025-11-26 03:42:07] apptainer works
[2025-11-26 03:42:07] Set ATHENA_PROC_NUMBER=12
[2025-11-26 03:42:07] Set ATHENA_CORE_NUMBER=12
[2025-11-26 03:42:07] Starting ATLAS job with PandaID=6897863670
[2025-11-26 03:42:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:27:36]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:27:36] 2025-11-26 12:26:56,418 | INFO     | extracted standard info from prmon json
[2025-11-26 06:27:36] 2025-11-26 12:26:56,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:27:36] 2025-11-26 12:26:56,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:27:36] 2025-11-26 12:26:56,420 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:27:36] 2025-11-26 12:26:56,420 | INFO     | sum of square deviations: 1318277740.5
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | sum of deviations: 51569699021.99998
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | mean x: 1764155062.5
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | mean y: 3507214.061728395
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | intersect: -69008464092.34642
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | chi2: 3.2042282800517556
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | sum of square deviations: 1199940638.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,421 | INFO     | sum of deviations: 88199758785.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | mean x: 1764154910.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | mean y: 3553801.4522292996
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | intersect: -129667892096.66844
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | chi2: 1.6345892760371814
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | current chi2=1.6345892760371814 (change=48.986491186864534 %)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | sum of square deviations: 1088905998.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | sum of deviations: 82153539770.49998
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | mean x: 1764154757.5
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | mean y: 3545493.4802631577
[2025-11-26 06:27:36] 2025-11-26 12:26:56,422 | INFO     | intersect: -133094773643.14827
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | chi2: 1.6362089392072967
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | current chi2=1.6362089392072967 (change=-0.09908685893510429 %)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | right removable region: 151
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | sum of square deviations: 1199940638.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | sum of deviations: 12971540138.99997
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | mean x: 1764155215.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | mean y: 3556326.8025477706
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | intersect: -19067228892.156445
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | chi2: 1.6399338747217502
[2025-11-26 06:27:36] 2025-11-26 12:26:56,423 | INFO     | current chi2=1.6399338747217502 (change=48.81969287483907 %)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | sum of square deviations: 1088905998.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | sum of deviations: 7338496694.500019
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | mean x: 1764155367.5
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | mean y: 3564035.9013157897
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | intersect: -11885660889.630978
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | chi2: 1.6339241549719357
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | current chi2=1.6339241549719357 (change=0.3664611020267049 %)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | left removable region: 20
[2025-11-26 06:27:36] 2025-11-26 12:26:56,424 | INFO     | sum of square deviations: 697054930.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,425 | INFO     | sum of deviations: 31714534887.999992
[2025-11-26 06:27:36] 2025-11-26 12:26:56,425 | INFO     | mean x: 1764155337.0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,425 | INFO     | mean y: 3618501.992366412
[2025-11-26 06:27:36] 2025-11-26 12:26:56,425 | INFO     | intersect: -80261743057.30093
[2025-11-26 06:27:36] 2025-11-26 12:26:56,425 | INFO     | chi2: 0.019548671570253768
[2025-11-26 06:27:36] 2025-11-26 12:26:56,425 | INFO     | current memory leak: 45.50 B/s (using 131 data points, chi2=0.02)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | could have reported an average CPU frequency of 4010 MHz (9 samples)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | ..............................
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . Timing measurements:
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . get job = 0 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . initial setup = 3 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . payload setup = 2 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . stage-in = 0 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . payload execution = 9853 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . stage-out = 1 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | . log creation = 0 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,426 | INFO     | ..............................
[2025-11-26 06:27:36] 2025-11-26 12:26:56,866 | INFO     | 
[2025-11-26 06:27:36] 2025-11-26 12:26:56,866 | INFO     | job summary report
[2025-11-26 06:27:36] 2025-11-26 12:26:56,866 | INFO     | --------------------------------------------------
[2025-11-26 06:27:36] 2025-11-26 12:26:56,866 | INFO     | PanDA job id: 6897863670
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | task id: 47556173
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | errors: (none)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | pilot state: finished 
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | transexitcode: 0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | exeerrorcode: 0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | exeerrordiag: 
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | exitcode: 0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | exitmsg: OK
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | cpuconsumptiontime: 114604 s
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | nevents: 1000
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | neventsw: 0
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | pid: 1335655
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | pgrp: 1335655
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | corecount: 12
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | event service: False
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | sizes: {0: 2284263, 2: 2284525, 11: 2284553, 9859: 2314207, 9861: 2323201, 9863: 2323257, 9869: 2323695}
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | --------------------------------------------------
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | 
[2025-11-26 06:27:36] 2025-11-26 12:26:56,867 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | job 6897863670 has completed (purged errors)
[2025-11-26 06:27:36] 2025-11-26 12:26:56,883 | INFO     | overall cleanup function is called
[2025-11-26 06:27:36] 2025-11-26 12:26:57,302 | INFO     | PID=1328761 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:27:36] 2025-11-26 12:26:57,302 | INFO     | .. there are 2 such processes running
[2025-11-26 06:27:36] 2025-11-26 12:26:57,897 | INFO     | --- collectZombieJob: --- 10, [1335655]
[2025-11-26 06:27:36] 2025-11-26 12:26:57,897 | INFO     | zombie collector waiting for pid 1335655
[2025-11-26 06:27:36] 2025-11-26 12:26:57,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:27:36] 2025-11-26 12:26:57,897 | INFO     | collected zombie processes
[2025-11-26 06:27:36] 2025-11-26 12:26:57,897 | INFO     | will attempt to kill all subprocesses of pid=1335655
[2025-11-26 06:27:36] 2025-11-26 12:26:57,967 | INFO     | process IDs to be killed: [1335655] (in reverse order)
[2025-11-26 06:27:36] 2025-11-26 12:26:58,003 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:27:36] 2025-11-26 12:26:58,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:27:36] 2025-11-26 12:26:58,006 | INFO     | did not find any defunct processes belonging to 1335655
[2025-11-26 06:27:36] 2025-11-26 12:26:58,008 | INFO     | did not find any defunct processes belonging to 1335655
[2025-11-26 06:27:36] 2025-11-26 12:26:58,009 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:27:36] 2025-11-26 12:26:58,009 | INFO     | ready for new job
[2025-11-26 06:27:36] 2025-11-26 12:26:58,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:27:36] 2025-11-26 12:26:58,011 | INFO     | ***************************************
[2025-11-26 06:27:36] 2025-11-26 12:26:58,011 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:27:36] 2025-11-26 12:26:58,011 | INFO     | ***************************************
[2025-11-26 06:27:36] 2025-11-26 12:26:58,011 | INFO     | 
[2025-11-26 06:27:36] 2025-11-26 12:26:58,012 | INFO     | architecture information:
[2025-11-26 06:27:36] 2025-11-26 12:26:58,012 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:27:36] 2025-11-26 12:26:58,019 | INFO     | cat /etc/os-release:
[2025-11-26 06:27:36] NAME="CentOS Linux"
[2025-11-26 06:27:36] VERSION="7 (Core)"
[2025-11-26 06:27:36] ID="centos"
[2025-11-26 06:27:36] ID_LIKE="rhel fedora"
[2025-11-26 06:27:36] VERSION_ID="7"
[2025-11-26 06:27:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:27:36] ANSI_COLOR="0;31"
[2025-11-26 06:27:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:27:36] HOME_URL="https://www.centos.org/"
[2025-11-26 06:27:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:27:36] 
[2025-11-26 06:27:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:27:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:27:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:27:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:27:36] 
[2025-11-26 06:27:36] 2025-11-26 12:26:58,020 | INFO     | ***************************************
[2025-11-26 06:27:36] 2025-11-26 12:26:58,522 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 06:27:36] 2025-11-26 12:26:58,531 | INFO     | sufficient remaining disk space (3849531162624 B)
[2025-11-26 06:27:36] 2025-11-26 12:26:58,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:27:36] 2025-11-26 12:26:58,531 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:27:36] 2025-11-26 12:26:58,531 | INFO     | update_server=False
[2025-11-26 06:27:36] 2025-11-26 12:26:58,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:27:36] 2025-11-26 12:26:58,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:27:36] 2025-11-26 12:26:58,902 | INFO     | all payload control threads have been joined
[2025-11-26 06:27:36] 2025-11-26 12:26:58,999 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 06:27:36] 2025-11-26 12:26:58,999 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 06:27:36] 2025-11-26 12:26:58,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:27:36] 2025-11-26 12:26:58,999 | INFO     | will abort loop
[2025-11-26 06:27:36] 2025-11-26 12:26:59,063 | INFO     | all data control threads have been joined
[2025-11-26 06:27:36] 2025-11-26 12:26:59,537 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:26:59,907 | INFO     | [payload] control thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:26:59,948 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,004 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,068 | INFO     | [data] control thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,196 | INFO     | all job control threads have been joined
[2025-11-26 06:27:36] 2025-11-26 12:27:00,316 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,494 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,537 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,872 | INFO     | [job] validate thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,949 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:00,972 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:01,033 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:01,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:27:36] 2025-11-26 12:27:01,201 | INFO     | [job] control thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:01,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:27:36] 2025-11-26 12:27:02,485 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:05,047 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:09,340 | INFO     | job.realtimelogging is not enabled
[2025-11-26 06:27:36] 2025-11-26 12:27:10,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:27:36] 2025-11-26 12:27:10,715 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-11-26 06:27:36] 2025-11-26 12:27:29,450 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:27:36] 2025-11-26 12:27:29,463 | INFO     | PID=1328761 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 06:27:36] 2025-11-26 12:27:29,464 | INFO     | .. there are 2 such processes running
[2025-11-26 06:27:36] 2025-11-26 12:27:29,464 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:27:36] 2025-11-26 12:27:29,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:27:36] 2025-11-26 12:27:29,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:27:36] 2025-11-26 12:27:31,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896165164864)>', '<ExcThread(monitor, started 139895506974464)>']
[2025-11-26 06:27:36] 2025-11-26 12:27:31,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:27:36] 2025-11-26 12:27:31,474 | INFO     | [monitor] control thread has ended
[2025-11-26 06:27:36] 2025-11-26 12:27:36,323 | INFO     | all workflow threads have been joined
[2025-11-26 06:27:36] 2025-11-26 12:27:36,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:27:36] 2025-11-26 12:27:36,324 | INFO     | traces error code: 0
[2025-11-26 06:27:36] 2025-11-26 12:27:36,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:27:36] 2025-11-26 12:27:36,388 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:27:36] 2025-11-26 12:27:36,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:27:36] 2025-11-26 12:27:36,391 [wrapper] pilotpid: 1328761
[2025-11-26 06:27:36] 2025-11-26 12:27:36,392 [wrapper] Pilot exit status: 0
[2025-11-26 06:27:36] 2025-11-26 12:27:36,397 [wrapper] pandaids: 6897863670
[2025-11-26 06:27:36] 2025-11-26 12:27:36,418 [wrapper] cleanup supervisor_pilot 1512664 1328762
[2025-11-26 06:27:36] 2025-11-26 12:27:36,420 [wrapper] Test setup, not cleaning
[2025-11-26 06:27:36] 2025-11-26 12:27:36,422 [wrapper] apfmon messages muted
[2025-11-26 06:27:36] 2025-11-26 12:27:36,423 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:27:36] 2025-11-26 12:27:36,425 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:27:36]  *** Error codes and diagnostics ***
[2025-11-26 06:27:36]     "exeErrorCode": 0,
[2025-11-26 06:27:36]     "exeErrorDiag": "",
[2025-11-26 06:27:36]     "pilotErrorCode": 0,
[2025-11-26 06:27:36]     "pilotErrorDiag": "",
[2025-11-26 06:27:36]  *** Listing of results directory ***
[2025-11-26 06:27:36] total 1311020
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc    576529 Nov 25 10:48 pilot3.tar.gz
[2025-11-26 06:27:36] -rwx------. 1 boinc boinc     36292 Nov 25 11:02 runpilot2-wrapper.sh
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc      5112 Nov 25 11:02 queuedata.json
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc       100 Nov 26 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:27:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 03:42 run_atlas
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc       105 Nov 26 03:42 job.xml
[2025-11-26 06:27:36] -rw-r--r--. 2 boinc boinc 410269259 Nov 26 03:42 EVNT.47483658._003121.pool.root.1
[2025-11-26 06:27:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 03:42 start_atlas.sh
[2025-11-26 06:27:36] drwxrwx--x. 1 boinc boinc        76 Nov 26 03:42 shared
[2025-11-26 06:27:36] -rw-r--r--. 2 boinc boinc    590108 Nov 26 03:42 input.tar.gz
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc     10032 Nov 26 03:42 init_data.xml
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc         0 Nov 26 03:42 boinc_setup_complete
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc         0 Nov 26 03:42 boinc_lockfile
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc      2785 Nov 26 03:42 pandaJob.out
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc        63 Nov 26 03:42 setup.sh.local
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc    991827 Nov 26 03:42 agis_schedconf.cvmfs.json
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc   1516240 Nov 26 03:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:27:36] drwx------. 1 boinc boinc       414 Nov 26 03:42 pilot3
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc       531 Nov 26 06:22 boinc_task_state.xml
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc 921528911 Nov 26 06:26 HITS.47556173._000909.pool.root.1
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc      1041 Nov 26 06:26 memory_monitor_summary.json
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc   1929722 Nov 26 06:26 log.47556173._000909.job.log.tgz.1
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc      8594 Nov 26 06:26 heartbeat.json
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc        95 Nov 26 06:27 pilot_heartbeat.json
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc        29 Nov 26 06:27 wrapper_checkpoint.txt
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc      8192 Nov 26 06:27 boinc_mmap_file
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc      5083 Nov 26 06:27 pilotlog.txt
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc   1457257 Nov 26 06:27 log.47556173._000909.job.log.1
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc       353 Nov 26 06:27 output.list
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc       620 Nov 26 06:27 runtime_log
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc   3409920 Nov 26 06:27 result.tar.gz
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc       658 Nov 26 06:27 ljnNDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMfMKDmcSE70m.diag
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc      9396 Nov 26 06:27 runtime_log.err
[2025-11-26 06:27:36] -rw-r--r--. 1 boinc boinc     20928 Nov 26 06:27 stderr.txt
[2025-11-26 06:27:36] HITS file was successfully produced:
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc 921528911 Nov 26 06:26 shared/HITS.pool.root.1
[2025-11-26 06:27:36]  *** Contents of shared directory: ***
[2025-11-26 06:27:36] total 1304516
[2025-11-26 06:27:36] -rw-r--r--. 2 boinc boinc 410269259 Nov 26 03:42 ATLAS.root_0
[2025-11-26 06:27:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 03:42 start_atlas.sh
[2025-11-26 06:27:36] -rw-r--r--. 2 boinc boinc    590108 Nov 26 03:42 input.tar.gz
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc 921528911 Nov 26 06:26 HITS.pool.root.1
[2025-11-26 06:27:36] -rw-------. 1 boinc boinc   3409920 Nov 26 06:27 result.tar.gz
06:27:38 (1324855): run_atlas exited; CPU time 114521.770619
06:27:38 (1324855): called boinc_finish(0)

</stderr_txt>
]]>

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