Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:27:20 (30557): wrapper (7.7.26015): starting
23:27:20 (30557): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:27:20] Arguments: --nthreads 8
[2025-11-25 23:27:20] Threads: 8
[2025-11-25 23:27:20] Checking for CVMFS
[2025-11-25 23:27:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:27:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:27:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:27:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:27:21] 2.11.2.0 12825 117179 138484 153309 0 81 10655960 18432001 1885 130560 0 82028585 99.975 4651165 22880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 23:27:21] CVMFS is ok
[2025-11-25 23:27:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:27:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:27:21] Further information can be found at the LHC@home message board.
[2025-11-25 23:27:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:27:21] Checking for apptainer binary...
[2025-11-25 23:27:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:27:21] Running /usr/bin/apptainer --version
[2025-11-25 23:27:21] apptainer version 1.3.2-1.el7
[2025-11-25 23:27:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:27:21] c-206-8.aglt2.org
[2025-11-25 23:27:21] apptainer works
[2025-11-25 23:27:21] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:27:21] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:27:21] Starting ATLAS job with PandaID=6897531688
[2025-11-25 23:27:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:36:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:36:33] 2025-11-26 23:35:45,233 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 18:36:33] 2025-11-26 23:35:45,236 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2416.875
[2025-11-26 18:36:33] 2025-11-26 23:35:45,239 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897531688/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,239 | INFO     | extracted standard info from prmon json
[2025-11-26 18:36:33] 2025-11-26 23:35:45,240 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:36:33] 2025-11-26 23:35:45,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:36:33] 2025-11-26 23:35:45,254 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:36:33] 2025-11-26 23:35:45,255 | INFO     | sum of square deviations: 446232702589.6243
[2025-11-26 18:36:33] 2025-11-26 23:35:45,292 | INFO     | sum of deviations: 2062842941422.947
[2025-11-26 18:36:33] 2025-11-26 23:35:45,293 | INFO     | mean x: 1764165682.6138175
[2025-11-26 18:36:33] 2025-11-26 23:35:45,293 | INFO     | mean y: 2873510.926483614
[2025-11-26 18:36:33] 2025-11-26 23:35:45,293 | INFO     | intersect: -8152505296.500989
[2025-11-26 18:36:33] 2025-11-26 23:35:45,295 | INFO     | chi2: 4.995922945776461
[2025-11-26 18:36:33] 2025-11-26 23:35:45,296 | INFO     | sum of square deviations: 440330459097.7326
[2025-11-26 18:36:33] 2025-11-26 23:35:45,340 | INFO     | sum of deviations: 2392922191362.1396
[2025-11-26 18:36:33] 2025-11-26 23:35:45,340 | INFO     | mean x: 1764165530.116548
[2025-11-26 18:36:33] 2025-11-26 23:35:45,340 | INFO     | mean y: 2882037.159252669
[2025-11-26 18:36:33] 2025-11-26 23:35:45,340 | INFO     | intersect: -9584260435.115335
[2025-11-26 18:36:33] 2025-11-26 23:35:45,342 | INFO     | chi2: 2.522286970519959
[2025-11-26 18:36:33] 2025-11-26 23:35:45,342 | INFO     | current chi2=2.522286970519959 (change=49.513093018132054 %)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,344 | INFO     | sum of square deviations: 434480495655.82294
[2025-11-26 18:36:33] 2025-11-26 23:35:45,386 | INFO     | sum of deviations: 2468001516326.22
[2025-11-26 18:36:33] 2025-11-26 23:35:45,386 | INFO     | mean x: 1764165377.619303
[2025-11-26 18:36:33] 2025-11-26 23:35:45,387 | INFO     | mean y: 2883991.054512958
[2025-11-26 18:36:33] 2025-11-26 23:35:45,387 | INFO     | intersect: -10018193757.079166
[2025-11-26 18:36:33] 2025-11-26 23:35:45,388 | INFO     | chi2: 2.268528652797877
[2025-11-26 18:36:33] 2025-11-26 23:35:45,389 | INFO     | current chi2=2.268528652797877 (change=10.060644196634403 %)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,389 | INFO     | right removable region: 1118
[2025-11-26 18:36:33] 2025-11-26 23:35:45,390 | INFO     | sum of square deviations: 440330036367.7325
[2025-11-26 18:36:33] 2025-11-26 23:35:45,435 | INFO     | sum of deviations: 1769670363089.6763
[2025-11-26 18:36:33] 2025-11-26 23:35:45,435 | INFO     | mean x: 1764165835.116548
[2025-11-26 18:36:33] 2025-11-26 23:35:45,435 | INFO     | mean y: 2881076.689501779
[2025-11-26 18:36:33] 2025-11-26 23:35:45,435 | INFO     | intersect: -7087237098.609893
[2025-11-26 18:36:33] 2025-11-26 23:35:45,437 | INFO     | chi2: 2.955528269222103
[2025-11-26 18:36:33] 2025-11-26 23:35:45,437 | INFO     | current chi2=2.955528269222103 (change=40.84119588512272 %)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,439 | INFO     | sum of square deviations: 434479786958.2969
[2025-11-26 18:36:33] 2025-11-26 23:35:45,482 | INFO     | sum of deviations: 1694520883884.9312
[2025-11-26 18:36:33] 2025-11-26 23:35:45,483 | INFO     | mean x: 1764165987.6175156
[2025-11-26 18:36:33] 2025-11-26 23:35:45,483 | INFO     | mean y: 2883035.319928508
[2025-11-26 18:36:33] 2025-11-26 23:35:45,483 | INFO     | intersect: -6877566178.636949
[2025-11-26 18:36:33] 2025-11-26 23:35:45,485 | INFO     | chi2: 2.8995319984160526
[2025-11-26 18:36:33] 2025-11-26 23:35:45,485 | INFO     | current chi2=2.8995319984160526 (change=1.894628157990472 %)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,485 | INFO     | left removable region: 20
[2025-11-26 18:36:33] 2025-11-26 23:35:45,486 | INFO     | sum of square deviations: 410475150735.6464
[2025-11-26 18:36:33] 2025-11-26 23:35:45,528 | INFO     | sum of deviations: 1996244170236.5588
[2025-11-26 18:36:33] 2025-11-26 23:35:45,529 | INFO     | mean x: 1764165957.12204
[2025-11-26 18:36:33] 2025-11-26 23:35:45,529 | INFO     | mean y: 2896253.2122040074
[2025-11-26 18:36:33] 2025-11-26 23:35:45,529 | INFO     | intersect: -8576687677.564437
[2025-11-26 18:36:33] 2025-11-26 23:35:45,530 | INFO     | chi2: 0.13860530306100693
[2025-11-26 18:36:33] 2025-11-26 23:35:45,531 | INFO     | current memory leak: 4.86 B/s (using 1098 data points, chi2=0.14)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,532 | INFO     | could have reported an average CPU frequency of 2634 MHz (41 samples)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,532 | INFO     | ..............................
[2025-11-26 18:36:33] 2025-11-26 23:35:45,532 | INFO     | . Timing measurements:
[2025-11-26 18:36:33] 2025-11-26 23:35:45,532 | INFO     | . get job = 0 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,533 | INFO     | . initial setup = 2 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,533 | INFO     | . payload setup = 5 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,533 | INFO     | . stage-in = 0 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,533 | INFO     | . payload execution = 68856 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,533 | INFO     | . stage-out = 4 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,534 | INFO     | . log creation = 0 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,534 | INFO     | ..............................
[2025-11-26 18:36:33] 2025-11-26 23:35:45,692 | INFO     | 
[2025-11-26 18:36:33] 2025-11-26 23:35:45,692 | INFO     | job summary report
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | --------------------------------------------------
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | PanDA job id: 6897531688
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | task id: 47556173
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | errors: (none)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | pilot state: finished 
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | transexitcode: 0
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | exeerrorcode: 0
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | exeerrordiag: 
[2025-11-26 18:36:33] 2025-11-26 23:35:45,693 | INFO     | exitcode: 0
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | exitmsg: OK
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | cpuconsumptiontime: 539072 s
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | nevents: 1000
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | neventsw: 0
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | pid: 8367
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | pgrp: 8367
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | corecount: 8
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | event service: False
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | sizes: {0: 2284092, 1: 2284291, 4: 2284553, 11: 2284581, 68865: 2340584, 68870: 2349606, 68872: 2349790, 68878: 2350132}
[2025-11-26 18:36:33] 2025-11-26 23:35:45,694 | INFO     | --------------------------------------------------
[2025-11-26 18:36:33] 2025-11-26 23:35:45,695 | INFO     | 
[2025-11-26 18:36:33] 2025-11-26 23:35:45,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 18:36:33] 2025-11-26 23:35:45,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:36:33] 2025-11-26 23:35:45,752 | INFO     | job 6897531688 has completed (purged errors)
[2025-11-26 18:36:33] 2025-11-26 23:35:45,752 | INFO     | overall cleanup function is called
[2025-11-26 18:36:33] 2025-11-26 23:35:46,764 | INFO     | --- collectZombieJob: --- 10, [8367]
[2025-11-26 18:36:33] 2025-11-26 23:35:46,764 | INFO     | zombie collector waiting for pid 8367
[2025-11-26 18:36:33] 2025-11-26 23:35:46,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:36:33] 2025-11-26 23:35:46,764 | INFO     | collected zombie processes
[2025-11-26 18:36:33] 2025-11-26 23:35:46,764 | INFO     | will attempt to kill all subprocesses of pid=8367
[2025-11-26 18:36:33] 2025-11-26 23:35:46,919 | INFO     | process IDs to be killed: [8367] (in reverse order)
[2025-11-26 18:36:33] 2025-11-26 23:35:46,977 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:36:33] 2025-11-26 23:35:46,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:36:33] 2025-11-26 23:35:46,983 | INFO     | did not find any defunct processes belonging to 8367
[2025-11-26 18:36:33] 2025-11-26 23:35:46,985 | INFO     | did not find any defunct processes belonging to 8367
[2025-11-26 18:36:33] 2025-11-26 23:35:46,987 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:36:33] 2025-11-26 23:35:46,987 | INFO     | ready for new job
[2025-11-26 18:36:33] 2025-11-26 23:35:46,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:36:33] 2025-11-26 23:35:46,990 | INFO     | ***************************************
[2025-11-26 18:36:33] 2025-11-26 23:35:46,990 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:36:33] 2025-11-26 23:35:46,991 | INFO     | ***************************************
[2025-11-26 18:36:33] 2025-11-26 23:35:46,991 | INFO     | 
[2025-11-26 18:36:33] 2025-11-26 23:35:46,992 | INFO     | architecture information:
[2025-11-26 18:36:33] 2025-11-26 23:35:46,992 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:36:33] 2025-11-26 23:35:47,004 | INFO     | cat /etc/os-release:
[2025-11-26 18:36:33] NAME="CentOS Linux"
[2025-11-26 18:36:33] VERSION="7 (Core)"
[2025-11-26 18:36:33] ID="centos"
[2025-11-26 18:36:33] ID_LIKE="rhel fedora"
[2025-11-26 18:36:33] VERSION_ID="7"
[2025-11-26 18:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:36:33] ANSI_COLOR="0;31"
[2025-11-26 18:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:36:33] HOME_URL="https://www.centos.org/"
[2025-11-26 18:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:36:33] 
[2025-11-26 18:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:36:33] 
[2025-11-26 18:36:33] 2025-11-26 23:35:47,005 | INFO     | ***************************************
[2025-11-26 18:36:33] 2025-11-26 23:35:47,507 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 18:36:33] 2025-11-26 23:35:47,522 | INFO     | sufficient remaining disk space (25025314816 B)
[2025-11-26 18:36:33] 2025-11-26 23:35:47,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:36:33] 2025-11-26 23:35:47,523 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:36:33] 2025-11-26 23:35:47,523 | INFO     | update_server=False
[2025-11-26 18:36:33] 2025-11-26 23:35:47,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:36:33] 2025-11-26 23:35:47,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:36:33] 2025-11-26 23:35:47,673 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 18:36:33] 2025-11-26 23:35:47,673 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 18:36:33] 2025-11-26 23:35:47,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:36:33] 2025-11-26 23:35:47,673 | INFO     | will abort loop
[2025-11-26 18:36:33] 2025-11-26 23:35:48,004 | INFO     | all payload control threads have been joined
[2025-11-26 18:36:33] 2025-11-26 23:35:48,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:36:33] 2025-11-26 23:35:48,407 | INFO     | all job control threads have been joined
[2025-11-26 18:36:33] 2025-11-26 23:35:48,416 | INFO     | all data control threads have been joined
[2025-11-26 18:36:33] 2025-11-26 23:35:48,529 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,533 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,644 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,679 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,739 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,789 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,848 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:48,849 | INFO     | [job] validate thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:49,010 | INFO     | [payload] control thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:49,412 | INFO     | [job] control thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:49,421 | INFO     | [data] control thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:49,592 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:49,860 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:50,362 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:50,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:36:33] 2025-11-26 23:35:54,687 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:35:58,234 | INFO     | job.realtimelogging is not enabled
[2025-11-26 18:36:33] 2025-11-26 23:35:59,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:36:33] 2025-11-26 23:36:18,453 | INFO     | PID=1845 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 18:36:33] 2025-11-26 23:36:18,453 | INFO     | .. there are 3 such processes running
[2025-11-26 18:36:33] 2025-11-26 23:36:18,460 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:36:33] 2025-11-26 23:36:18,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:36:33] 2025-11-26 23:36:18,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:36:33] 2025-11-26 23:36:26,670 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:36:33] 2025-11-26 23:36:28,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788753491776)>', '<ExcThread(monitor, started 139788090861312)>']
[2025-11-26 18:36:33] 2025-11-26 23:36:28,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:36:33] 2025-11-26 23:36:28,513 | INFO     | [monitor] control thread has ended
[2025-11-26 18:36:33] 2025-11-26 23:36:33,141 | INFO     | all workflow threads have been joined
[2025-11-26 18:36:33] 2025-11-26 23:36:33,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:36:33] 2025-11-26 23:36:33,141 | INFO     | traces error code: 0
[2025-11-26 18:36:33] 2025-11-26 23:36:33,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:36:33] 2025-11-26 23:36:33,262 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:36:33] 2025-11-26 23:36:33,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:36:33] 2025-11-26 23:36:33,266 [wrapper] pilotpid: 1845
[2025-11-26 18:36:33] 2025-11-26 23:36:33,267 [wrapper] Pilot exit status: 0
[2025-11-26 18:36:33] 2025-11-26 23:36:33,279 [wrapper] pandaids: 6897531688
[2025-11-26 18:36:33] 2025-11-26 23:36:33,319 [wrapper] cleanup supervisor_pilot 11283 1846
[2025-11-26 18:36:33] 2025-11-26 23:36:33,322 [wrapper] Test setup, not cleaning
[2025-11-26 18:36:33] 2025-11-26 23:36:33,327 [wrapper] apfmon messages muted
[2025-11-26 18:36:33] 2025-11-26 23:36:33,329 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:36:33] 2025-11-26 23:36:33,331 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:36:33]  *** Error codes and diagnostics ***
[2025-11-26 18:36:33]     "exeErrorCode": 0,
[2025-11-26 18:36:33]     "exeErrorDiag": "",
[2025-11-26 18:36:33]     "pilotErrorCode": 0,
[2025-11-26 18:36:33]     "pilotErrorDiag": "",
[2025-11-26 18:36:33]  *** Listing of results directory ***
[2025-11-26 18:36:33] total 1332924
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 18:36:33] -rwx------ 1 boincer umatlas     36292 Nov 25 12:02 runpilot2-wrapper.sh
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas       100 Nov 25 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:36:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 23:27 run_atlas
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas       105 Nov 25 23:27 job.xml
[2025-11-26 18:36:33] -rw-r--r-- 2 boincer umatlas 410796386 Nov 25 23:27 EVNT.47483658._003117.pool.root.1
[2025-11-26 18:36:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 23:27 start_atlas.sh
[2025-11-26 18:36:33] drwxrwx--x 2 boincer umatlas      4096 Nov 25 23:27 shared
[2025-11-26 18:36:33] -rw-r--r-- 2 boincer umatlas    590110 Nov 25 23:27 input.tar.gz
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas         0 Nov 25 23:27 boinc_lockfile
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 23:27 pandaJob.out
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas        57 Nov 25 23:27 setup.sh.local
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas    991877 Nov 25 23:27 agis_schedconf.cvmfs.json
[2025-11-26 18:36:33] drwx------ 5 boincer umatlas      4096 Nov 25 23:27 pilot3
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas       533 Nov 26 18:25 boinc_task_state.xml
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas      5953 Nov 26 18:31 init_data.xml
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas 926568434 Nov 26 18:34 HITS.47556173._000886.pool.root.1
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas      1067 Nov 26 18:35 memory_monitor_summary.json
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas   1516240 Nov 26 18:35 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas   2300132 Nov 26 18:35 log.47556173._000886.job.log.tgz.1
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas      8659 Nov 26 18:35 heartbeat.json
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas        95 Nov 26 18:36 pilot_heartbeat.json
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 18:36 boinc_mmap_file
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas        29 Nov 26 18:36 wrapper_checkpoint.txt
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas      5078 Nov 26 18:36 pilotlog.txt
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas   9514540 Nov 26 18:36 log.47556173._000886.job.log.1
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas       353 Nov 26 18:36 output.list
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas       620 Nov 26 18:36 runtime_log
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas  11837440 Nov 26 18:36 result.tar.gz
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 18:36 runtime_log.err
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas       667 Nov 26 18:36 GxLNDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3eMKDmw0mpUo.diag
[2025-11-26 18:36:33] -rw-r--r-- 1 boincer umatlas     21226 Nov 26 18:36 stderr.txt
[2025-11-26 18:36:33] HITS file was successfully produced:
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas 926568434 Nov 26 18:34 shared/HITS.pool.root.1
[2025-11-26 18:36:33]  *** Contents of shared directory: ***
[2025-11-26 18:36:33] total 1318184
[2025-11-26 18:36:33] -rw-r--r-- 2 boincer umatlas 410796386 Nov 25 23:27 ATLAS.root_0
[2025-11-26 18:36:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 23:27 start_atlas.sh
[2025-11-26 18:36:33] -rw-r--r-- 2 boincer umatlas    590110 Nov 25 23:27 input.tar.gz
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas 926568434 Nov 26 18:34 HITS.pool.root.1
[2025-11-26 18:36:33] -rw------- 1 boincer umatlas  11837440 Nov 26 18:36 result.tar.gz
18:36:34 (30557): run_atlas exited; CPU time 538558.386805
18:36:34 (30557): called boinc_finish(0)

</stderr_txt>
]]>

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