Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 04:06:39 (55024): vboxwrapper version 26210
2025-11-26 04:06:39 (55024): BOINC client version: 7.16.16
2025-11-26 04:06:39 (55024): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-26 04:06:39 (55024): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 04:06:39 (55024): Create VM. (boinc_49d991fa7c7b7500, slot#0)
2025-11-26 04:06:40 (55024): Setting Memory Size for VM. (4400MB)
2025-11-26 04:06:40 (55024): Setting CPU Count for VM. (4)
2025-11-26 04:06:40 (55024): Setting Chipset Options for VM.
2025-11-26 04:06:40 (55024): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 04:06:40 (55024): Setting Boot Options for VM.
2025-11-26 04:06:40 (55024): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 04:06:40 (55024): Enabling VM Network Access.
2025-11-26 04:06:40 (55024): Disabling USB Support for VM.
2025-11-26 04:06:40 (55024): Disabling COM Port Support for VM.
2025-11-26 04:06:40 (55024): Disabling LPT Port Support for VM.
2025-11-26 04:06:40 (55024): Disabling Audio Support for VM.
2025-11-26 04:06:40 (55024): Disabling Clipboard Support for VM.
2025-11-26 04:06:40 (55024): Disabling Drag and Drop Support for VM.
2025-11-26 04:06:41 (55024): Adding storage controller(s) to VM.
2025-11-26 04:06:41 (55024): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 04:06:41 (55024): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 04:06:41 (55024): forwarding host port 47087 to guest port 80
2025-11-26 04:06:41 (55024): Enabling remote desktop for VM.
2025-11-26 04:06:41 (55024): Enabling shared directory for VM.
2025-11-26 04:06:42 (55024): Starting VM using VBoxManage interface. (boinc_49d991fa7c7b7500, slot#0)
2025-11-26 04:06:43 (55024): Successfully started VM. (PID = '55509')
2025-11-26 04:06:43 (55024): Reporting VM Process ID to BOINC.
2025-11-26 04:06:43 (55024): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-26 04:06:43 (55024): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 04:06:43 (55024): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 04:06:43 (55024): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 04:06:43 (55024): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 04:06:43 (55024): Detected: Web Application Enabled (http://localhost:47087)
2025-11-26 04:06:43 (55024): Detected: Remote Desktop Enabled (localhost:48747)
2025-11-26 04:06:43 (55024): Preference change detected
2025-11-26 04:06:43 (55024): Setting CPU throttle for VM. (100%)
2025-11-26 04:06:43 (55024): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 04:06:45 (55024): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 04:06:45 (55024): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 04:06:48 (55024): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 04:06:48 (55024): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 04:06:48 (55024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 04:06:52 (55024): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 04:06:52 (55024): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 04:06:58 (55024): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000125 main     Log opened 2025-11-26T10:06:55.992054000Z
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000196 main     OS Product: Linux
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000217 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000232 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000247 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000248 main     Process ID: 1298
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.000248 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 04:06:58 (55024): Guest Log: 00:00:00.001516 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 04:06:58 (55024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 04:06:58 (55024): Guest Log: [INFO] Mounting shared directory
2025-11-26 04:06:58 (55024): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 04:07:20 (55024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 04:07:20 (55024): Guest Log: [INFO] Detected branch: prod
2025-11-26 04:07:21 (55024): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 04:07:21 (55024): Guest Log: Copying input files
2025-11-26 04:07:23 (55024): Guest Log: Copied input files into RunAtlas.
2025-11-26 04:07:23 (55024): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 04:07:23 (55024): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 04:07:23 (55024): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 04:07:23 (55024): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 04:08:32 (55024): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 04:08:32 (55024): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 04:08:32 (55024): Guest Log: 2.6.3.0 1593 1 32188 153317 3 1 3120538 4096000 0 65024 0 0 n/a 1292 678 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-26 04:08:33 (55024): Guest Log: copied the webapp to /var/www
2025-11-26 04:08:33 (55024): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-26 04:08:33 (55024): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-26 04:08:33 (55024): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 04:08:33 (55024): Guest Log:  *** Starting ATLAS job. (PandaID=6897531549 taskID=47556173) ***
2025-11-26 05:45:54 (55024): Status Report: Elapsed Time: '6000.000000'
2025-11-26 05:45:54 (55024): Status Report: CPU Time: '21863.380000'
2025-11-26 07:25:06 (55024): Status Report: Elapsed Time: '12000.000000'
2025-11-26 07:25:06 (55024): Status Report: CPU Time: '45620.480000'
2025-11-26 09:04:18 (55024): Status Report: Elapsed Time: '18000.000000'
2025-11-26 09:04:18 (55024): Status Report: CPU Time: '69386.900000'
2025-11-26 10:43:29 (55024): Status Report: Elapsed Time: '24000.000000'
2025-11-26 10:43:29 (55024): Status Report: CPU Time: '93155.580000'
2025-11-26 12:22:41 (55024): Status Report: Elapsed Time: '30000.000000'
2025-11-26 12:22:41 (55024): Status Report: CPU Time: '116926.130000'
2025-11-26 13:38:25 (55024): Guest Log:  *** Job finished ***
2025-11-26 13:38:25 (55024): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:11,706 | INFO     | [data] copytool_out thread has finished
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:13,750 | INFO     | [data] queue_monitor thread has finished
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:14,764 | INFO     | [monitor] cgroup control has ended
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:16,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945710049088)>', '<ExcThread(monitor, started 139945125603072)>']
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:17,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:17,695 | INFO     | [monitor] control thread has ended
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:21,903 | INFO     | all workflow threads have been joined
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:21,904 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:21,904 | INFO     | traces error code: 0
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:21,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,006 [wrapper] ==== pilot stdout END ====
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,012 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,018 [wrapper] pilotpid: 6006
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,025 [wrapper] Pilot exit status: 0
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,049 [wrapper] pandaids: 6897531549
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,094 [wrapper] cleanup supervisor_pilot 11402 6007
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,099 [wrapper] Test setup, not cleaning
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,105 [wrapper] apfmon messages muted
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,110 [wrapper] ==== wrapper stdout END ====
2025-11-26 13:38:25 (55024): Guest Log: 2025-11-26 19:38:22,116 [wrapper] ==== wrapper stderr END ====
2025-11-26 13:38:25 (55024): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 13:38:25 (55024): Guest Log:     "exeErrorCode": 0,
2025-11-26 13:38:25 (55024): Guest Log:     "exeErrorDiag": "",
2025-11-26 13:38:25 (55024): Guest Log:     "pilotErrorCode": 0,
2025-11-26 13:38:25 (55024): Guest Log:     "pilotErrorDiag": "",
2025-11-26 13:38:25 (55024): Guest Log:  *** Listing of results directory ***
2025-11-26 13:38:25 (55024): Guest Log: total 917940
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 16:48 pilot3.tar.gz
2025-11-26 13:38:25 (55024): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 17:02 runpilot2-wrapper.sh
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 17:02 queuedata.json
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 26 10:07 start_atlas.sh
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas    590108 Nov 26 10:07 input.tar.gz
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas      9078 Nov 26 10:07 init_data.xml
2025-11-26 13:38:25 (55024): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 10:07 EVNT.47483658._003114.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 26 10:08 pandaJob.out
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas    991827 Nov 26 10:09 agis_schedconf.cvmfs.json
2025-11-26 13:38:25 (55024): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 10:09 pilot3
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas 924587476 Nov 26 19:37 HITS.47556173._000866.pool.root.1
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 26 19:37 memory_monitor_summary.json
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 19:37 agis_ddmendpoints.agis.ALL.json
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas   1361660 Nov 26 19:37 log.47556173._000866.job.log.tgz.1
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 19:38 pilot_heartbeat.json
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas      8668 Nov 26 19:38 heartbeat.json
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 26 19:38 pilotlog.txt
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas   4404723 Nov 26 19:38 log.47556173._000866.job.log.1
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 19:38 output.list
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 19:38 runtime_log
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas   5785600 Nov 26 19:38 result.tar.gz
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Nov 26 19:38 runtime_log.err
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas       665 Nov 26 19:38 AymMDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmneMKDmiqZMLm.diag
2025-11-26 13:38:25 (55024): Guest Log: Looking for outputfile HITS.47556173._000866.pool.root.1
2025-11-26 13:38:25 (55024): Guest Log: HITS file was successfully produced
2025-11-26 13:38:25 (55024): Guest Log: -rw-------. 1 atlas atlas 924587476 Nov 26 19:37 /home/atlas/RunAtlas/HITS.47556173._000866.pool.root.1
2025-11-26 13:38:25 (55024): Guest Log: Successfully finished the ATLAS job!
2025-11-26 13:38:25 (55024): Guest Log: Copying the results back to the shared directory!
2025-11-26 13:38:25 (55024): Guest Log:  *** Contents of shared directory: ***
2025-11-26 13:38:25 (55024): Guest Log: total 407036
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 root root 410393197 Nov 26 10:06 ATLAS.root_0
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 root root      9078 Nov 26 10:06 init_data.xml
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 root root    590108 Nov 26 10:06 input.tar.gz
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 root root   5785600 Nov 26 19:38 result.tar.gz
2025-11-26 13:38:25 (55024): Guest Log: -rw-r--r--. 1 root root     15847 Nov 26 10:06 start_atlas.sh
2025-11-26 13:38:25 (55024): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 13:38:25 (55024): VM Completion File Detected.
2025-11-26 13:38:25 (55024): Powering off VM.
2025-11-26 13:38:25 (55024): Successfully stopped VM.
2025-11-26 13:38:25 (55024): Deregistering VM. (boinc_49d991fa7c7b7500, slot#0)
2025-11-26 13:38:25 (55024): Removing network bandwidth throttle group from VM.
2025-11-26 13:38:26 (55024): Removing VM from VirtualBox.
2025-11-26 13:38:31 (55024): called boinc_finish(0)

</stderr_txt>
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