Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:24:05 (1002178): wrapper (7.7.26015): starting
23:24:05 (1002178): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:24:05] Arguments: --nthreads 8
[2025-11-25 23:24:05] Threads: 8
[2025-11-25 23:24:05] Checking for CVMFS
[2025-11-25 23:24:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:24:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:24:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:24:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:24:06] 2.13.3.0 10079 27869 393796 153309 1 173 23378186 32935936 52589 16776704 0 306046650 99.795 156891900 29136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:24:06] CVMFS is ok
[2025-11-25 23:24:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:24:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:24:06] Further information can be found at the LHC@home message board.
[2025-11-25 23:24:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:24:06] Checking for apptainer binary...
[2025-11-25 23:24:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:24:06] Running /usr/bin/apptainer --version
[2025-11-25 23:24:06] apptainer version 1.4.4-1.el9
[2025-11-25 23:24:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:24:06] lc-12-33.aglt2.org
[2025-11-25 23:24:06] apptainer works
[2025-11-25 23:24:06] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:24:06] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:24:06] Starting ATLAS job with PandaID=6897863961
[2025-11-25 23:24:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:29:19]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:29:19] 2025-11-26 19:28:17,433 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:29:19] 2025-11-26 19:28:17,433 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:29:19] 2025-11-26 19:28:17,466 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:29:19] 2025-11-26 19:28:17,467 | INFO     | sum of square deviations: 217124413387.8368
[2025-11-26 14:29:19] 2025-11-26 19:28:17,503 | INFO     | sum of deviations: 967257838542.8654
[2025-11-26 14:29:19] 2025-11-26 19:28:17,503 | INFO     | mean x: 1764158194.0135136
[2025-11-26 14:29:19] 2025-11-26 19:28:17,504 | INFO     | mean y: 2887078.927927928
[2025-11-26 14:29:19] 2025-11-26 19:28:17,504 | INFO     | intersect: -7856182359.482758
[2025-11-26 14:29:19] 2025-11-26 19:28:17,505 | INFO     | chi2: 9.32873408532709
[2025-11-26 14:29:19] 2025-11-26 19:28:17,506 | INFO     | sum of square deviations: 213477993176.07065
[2025-11-26 14:29:19] 2025-11-26 19:28:17,543 | INFO     | sum of deviations: 1256996834354.5
[2025-11-26 14:29:19] 2025-11-26 19:28:17,543 | INFO     | mean x: 1764158041.5277462
[2025-11-26 14:29:19] 2025-11-26 19:28:17,543 | INFO     | mean y: 2899192.061155153
[2025-11-26 14:29:19] 2025-11-26 19:28:17,544 | INFO     | intersect: -10384780776.77032
[2025-11-26 14:29:19] 2025-11-26 19:28:17,544 | INFO     | chi2: 6.320215003466329
[2025-11-26 14:29:19] 2025-11-26 19:28:17,545 | INFO     | current chi2=6.320215003466329 (change=32.2500250767441 %)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,550 | INFO     | sum of square deviations: 209872643501.44104
[2025-11-26 14:29:19] 2025-11-26 19:28:17,589 | INFO     | sum of deviations: 1538848435382.6018
[2025-11-26 14:29:19] 2025-11-26 19:28:17,589 | INFO     | mean x: 1764157889.0421412
[2025-11-26 14:29:19] 2025-11-26 19:28:17,589 | INFO     | mean y: 2911107.2539863326
[2025-11-26 14:29:19] 2025-11-26 19:28:17,589 | INFO     | intersect: -12932417490.261545
[2025-11-26 14:29:19] 2025-11-26 19:28:17,595 | INFO     | chi2: 3.3644645927740475
[2025-11-26 14:29:19] 2025-11-26 19:28:17,595 | INFO     | current chi2=3.3644645927740475 (change=46.76661172240496 %)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,596 | INFO     | sum of square deviations: 206307810962.08212
[2025-11-26 14:29:19] 2025-11-26 19:28:17,658 | INFO     | sum of deviations: 1605483851066.1794
[2025-11-26 14:29:19] 2025-11-26 19:28:17,658 | INFO     | mean x: 1764157736.5498283
[2025-11-26 14:29:19] 2025-11-26 19:28:17,658 | INFO     | mean y: 2913949.5246277205
[2025-11-26 14:29:19] 2025-11-26 19:28:17,661 | INFO     | intersect: -13725731338.097437
[2025-11-26 14:29:19] 2025-11-26 19:28:17,662 | INFO     | chi2: 3.007275168120659
[2025-11-26 14:29:19] 2025-11-26 19:28:17,662 | INFO     | current chi2=3.007275168120659 (change=10.616530945831142 %)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,662 | INFO     | right removable region: 872
[2025-11-26 14:29:19] 2025-11-26 19:28:17,663 | INFO     | sum of square deviations: 213476631656.07098
[2025-11-26 14:29:19] 2025-11-26 19:28:17,681 | INFO     | sum of deviations: 677945688638.35
[2025-11-26 14:29:19] 2025-11-26 19:28:17,681 | INFO     | mean x: 1764158346.5277462
[2025-11-26 14:29:19] 2025-11-26 19:28:17,681 | INFO     | mean y: 2899169.679501699
[2025-11-26 14:29:19] 2025-11-26 19:28:17,681 | INFO     | intersect: -5599604185.491987
[2025-11-26 14:29:19] 2025-11-26 19:28:17,682 | INFO     | chi2: 6.605639906785123
[2025-11-26 14:29:19] 2025-11-26 19:28:17,683 | INFO     | current chi2=6.605639906785123 (change=29.190393397803543 %)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,684 | INFO     | sum of square deviations: 209870189796.83392
[2025-11-26 14:29:19] 2025-11-26 19:28:17,699 | INFO     | sum of deviations: 612966518065.5206
[2025-11-26 14:29:19] 2025-11-26 19:28:17,699 | INFO     | mean x: 1764158499.0364466
[2025-11-26 14:29:19] 2025-11-26 19:28:17,699 | INFO     | mean y: 2901916.577448747
[2025-11-26 14:29:19] 2025-11-26 19:28:17,699 | INFO     | intersect: -5149664503.25041
[2025-11-26 14:29:19] 2025-11-26 19:28:17,701 | INFO     | chi2: 6.521304775827246
[2025-11-26 14:29:19] 2025-11-26 19:28:17,701 | INFO     | current chi2=6.521304775827246 (change=1.276714022380333 %)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,701 | INFO     | left removable region: 20
[2025-11-26 14:29:19] 2025-11-26 19:28:17,702 | INFO     | sum of square deviations: 191773704827.19238
[2025-11-26 14:29:19] 2025-11-26 19:28:17,716 | INFO     | sum of deviations: 1167467240947.187
[2025-11-26 14:29:19] 2025-11-26 19:28:17,716 | INFO     | mean x: 1764158316.0751173
[2025-11-26 14:29:19] 2025-11-26 19:28:17,716 | INFO     | mean y: 2932756.8720657276
[2025-11-26 14:29:19] 2025-11-26 19:28:17,716 | INFO     | intersect: -10736793232.76848
[2025-11-26 14:29:19] 2025-11-26 19:28:17,717 | INFO     | chi2: 0.12412045712291626
[2025-11-26 14:29:19] 2025-11-26 19:28:17,718 | INFO     | current memory leak: 6.09 B/s (using 852 data points, chi2=0.12)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | could have reported an average CPU frequency of 2747 MHz (33 samples)
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | ..............................
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | . Timing measurements:
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | . get job = 0 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | . initial setup = 3 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | . payload setup = 17 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,719 | INFO     | . stage-in = 0 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,720 | INFO     | . payload execution = 54145 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,720 | INFO     | . stage-out = 4 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,720 | INFO     | . log creation = 0 s
[2025-11-26 14:29:19] 2025-11-26 19:28:17,720 | INFO     | ..............................
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | 
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | job summary report
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | --------------------------------------------------
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | PanDA job id: 6897863961
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | task id: 47556161
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | errors: (none)
[2025-11-26 14:29:19] 2025-11-26 19:28:18,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | pilot state: finished 
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | transexitcode: 0
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | exeerrorcode: 0
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | exeerrordiag: 
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | exitcode: 0
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | exitmsg: OK
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | cpuconsumptiontime: 255747 s
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | nevents: 1000
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | neventsw: 0
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | pid: 1013205
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | pgrp: 1013205
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | corecount: 8
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | event service: False
[2025-11-26 14:29:19] 2025-11-26 19:28:18,057 | INFO     | sizes: {0: 2284265, 11: 2284265, 14: 2284555, 22: 2284583, 54166: 2333670, 54167: 2333669, 54172: 2342847, 54175: 2342903, 54189: 2343213}
[2025-11-26 14:29:19] 2025-11-26 19:28:18,058 | INFO     | --------------------------------------------------
[2025-11-26 14:29:19] 2025-11-26 19:28:18,058 | INFO     | 
[2025-11-26 14:29:19] 2025-11-26 19:28:18,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 14:29:19] 2025-11-26 19:28:18,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:29:19] 2025-11-26 19:28:18,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:29:19] 2025-11-26 19:28:18,108 | INFO     | job 6897863961 has completed (purged errors)
[2025-11-26 14:29:19] 2025-11-26 19:28:18,108 | INFO     | overall cleanup function is called
[2025-11-26 14:29:19] 2025-11-26 19:28:19,124 | INFO     | --- collectZombieJob: --- 10, [1013205]
[2025-11-26 14:29:19] 2025-11-26 19:28:19,124 | INFO     | zombie collector waiting for pid 1013205
[2025-11-26 14:29:19] 2025-11-26 19:28:19,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:29:19] 2025-11-26 19:28:19,125 | INFO     | collected zombie processes
[2025-11-26 14:29:19] 2025-11-26 19:28:19,125 | INFO     | will attempt to kill all subprocesses of pid=1013205
[2025-11-26 14:29:19] 2025-11-26 19:28:19,906 | INFO     | process IDs to be killed: [1013205] (in reverse order)
[2025-11-26 14:29:19] 2025-11-26 19:28:20,269 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:29:19] 2025-11-26 19:28:20,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:29:19] 2025-11-26 19:28:20,299 | INFO     | did not find any defunct processes belonging to 1013205
[2025-11-26 14:29:19] 2025-11-26 19:28:20,373 | INFO     | did not find any defunct processes belonging to 1013205
[2025-11-26 14:29:19] 2025-11-26 19:28:20,424 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:29:19] 2025-11-26 19:28:20,424 | INFO     | ready for new job
[2025-11-26 14:29:19] 2025-11-26 19:28:20,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:29:19] 2025-11-26 19:28:20,448 | INFO     | ***************************************
[2025-11-26 14:29:19] 2025-11-26 19:28:20,448 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:29:19] 2025-11-26 19:28:20,448 | INFO     | ***************************************
[2025-11-26 14:29:19] 2025-11-26 19:28:20,448 | INFO     | 
[2025-11-26 14:29:19] 2025-11-26 19:28:20,457 | INFO     | architecture information:
[2025-11-26 14:29:19] 2025-11-26 19:28:20,461 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:29:19] 2025-11-26 19:28:20,492 | INFO     | cat /etc/os-release:
[2025-11-26 14:29:19] NAME="CentOS Linux"
[2025-11-26 14:29:19] VERSION="7 (Core)"
[2025-11-26 14:29:19] ID="centos"
[2025-11-26 14:29:19] ID_LIKE="rhel fedora"
[2025-11-26 14:29:19] VERSION_ID="7"
[2025-11-26 14:29:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:29:19] ANSI_COLOR="0;31"
[2025-11-26 14:29:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:29:19] HOME_URL="https://www.centos.org/"
[2025-11-26 14:29:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:29:19] 
[2025-11-26 14:29:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:29:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:29:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:29:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:29:19] 
[2025-11-26 14:29:19] 2025-11-26 19:28:20,493 | INFO     | ***************************************
[2025-11-26 14:29:19] 2025-11-26 19:28:20,996 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 14:29:19] 2025-11-26 19:28:21,035 | INFO     | sufficient remaining disk space (67877470208 B)
[2025-11-26 14:29:19] 2025-11-26 19:28:21,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:29:19] 2025-11-26 19:28:21,036 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:29:19] 2025-11-26 19:28:21,036 | INFO     | update_server=False
[2025-11-26 14:29:19] 2025-11-26 19:28:21,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:29:19] 2025-11-26 19:28:21,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:29:19] 2025-11-26 19:28:21,156 | INFO     | all job control threads have been joined
[2025-11-26 14:29:19] 2025-11-26 19:28:21,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:29:19] 2025-11-26 19:28:21,576 | INFO     | aborting loop
[2025-11-26 14:29:19] 2025-11-26 19:28:21,634 | INFO     | all payload control threads have been joined
[2025-11-26 14:29:19] 2025-11-26 19:28:21,733 | INFO     | all data control threads have been joined
[2025-11-26 14:29:19] 2025-11-26 19:28:22,042 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,042 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,162 | INFO     | [job] control thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,534 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,581 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,639 | INFO     | [payload] control thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,739 | INFO     | [data] control thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,755 | INFO     | [job] validate thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:22,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:29:19] 2025-11-26 19:28:22,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:23,064 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:23,129 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:23,323 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:23,324 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:23,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:29:19] 2025-11-26 19:28:23,405 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:23,832 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:27,358 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:29:19] 2025-11-26 19:28:50,661 | INFO     | PID=1005996 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 14:29:19] 2025-11-26 19:28:50,661 | INFO     | .. there are 78 such processes running
[2025-11-26 14:29:19] 2025-11-26 19:28:50,662 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:29:19] 2025-11-26 19:28:50,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:29:19] 2025-11-26 19:28:50,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:29:19] 2025-11-26 19:29:11,830 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:29:19] 2025-11-26 19:29:13,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928540804928)>', '<ExcThread(monitor, started 139927752800000)>']
[2025-11-26 14:29:19] 2025-11-26 19:29:13,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:29:19] 2025-11-26 19:29:13,818 | INFO     | [monitor] control thread has ended
[2025-11-26 14:29:19] 2025-11-26 19:29:18,347 | INFO     | all workflow threads have been joined
[2025-11-26 14:29:19] 2025-11-26 19:29:18,351 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:29:19] 2025-11-26 19:29:18,351 | INFO     | traces error code: 0
[2025-11-26 14:29:19] 2025-11-26 19:29:18,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:29:19] 2025-11-26 19:29:18,577 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:29:19] 2025-11-26 19:29:18,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:29:19] 2025-11-26 19:29:18,588 [wrapper] pilotpid: 1005996
[2025-11-26 14:29:19] 2025-11-26 19:29:18,591 [wrapper] Pilot exit status: 0
[2025-11-26 14:29:19] 2025-11-26 19:29:18,617 [wrapper] pandaids: 6897863961
[2025-11-26 14:29:19] 2025-11-26 19:29:18,807 [wrapper] cleanup supervisor_pilot 3111734 1005997
[2025-11-26 14:29:19] 2025-11-26 19:29:18,838 [wrapper] Test setup, not cleaning
[2025-11-26 14:29:19] 2025-11-26 19:29:18,846 [wrapper] apfmon messages muted
[2025-11-26 14:29:19] 2025-11-26 19:29:18,865 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:29:19] 2025-11-26 19:29:18,872 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:29:19]  *** Error codes and diagnostics ***
[2025-11-26 14:29:19]     "exeErrorCode": 0,
[2025-11-26 14:29:19]     "exeErrorDiag": "",
[2025-11-26 14:29:19]     "pilotErrorCode": 0,
[2025-11-26 14:29:19]     "pilotErrorDiag": "",
[2025-11-26 14:29:19]  *** Listing of results directory ***
[2025-11-26 14:29:19] total 1335276
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 14:29:19] -rwx------. 1 boincer umatlas     36292 Nov 25 12:02 runpilot2-wrapper.sh
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:29:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:24 run_atlas
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:24 job.xml
[2025-11-26 14:29:19] -rw-r--r--. 2 boincer umatlas 411096420 Nov 25 23:24 EVNT.47483658._002341.pool.root.1
[2025-11-26 14:29:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:24 shared
[2025-11-26 14:29:19] -rw-r--r--. 2 boincer umatlas    590113 Nov 25 23:24 input.tar.gz
[2025-11-26 14:29:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:24 start_atlas.sh
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:24 boinc_lockfile
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 23:24 pandaJob.out
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas        57 Nov 25 23:24 setup.sh.local
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas    991877 Nov 25 23:24 agis_schedconf.cvmfs.json
[2025-11-26 14:29:19] drwx------. 5 boincer umatlas      4096 Nov 25 23:24 pilot3
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas       533 Nov 26 14:13 boinc_task_state.xml
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas      6885 Nov 26 14:18 init_data.xml
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas 935075227 Nov 26 14:27 HITS.47556161._003235.pool.root.1
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas      1060 Nov 26 14:27 memory_monitor_summary.json
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas   1516240 Nov 26 14:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas   2042574 Nov 26 14:28 log.47556161._003235.job.log.tgz.1
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas      8622 Nov 26 14:28 heartbeat.json
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas        95 Nov 26 14:28 pilot_heartbeat.json
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 14:29 boinc_mmap_file
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas        29 Nov 26 14:29 wrapper_checkpoint.txt
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas      4824 Nov 26 14:29 pilotlog.txt
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas   6571172 Nov 26 14:29 log.47556161._003235.job.log.1
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas       353 Nov 26 14:29 output.list
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas       620 Nov 26 14:29 runtime_log
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas   8632320 Nov 26 14:29 result.tar.gz
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas       660 Nov 26 14:29 XlALDmlbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdjJKDmz35OVo.diag
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 14:29 runtime_log.err
[2025-11-26 14:29:19] -rw-r--r--. 1 boincer umatlas     21145 Nov 26 14:29 stderr.txt
[2025-11-26 14:29:19] HITS file was successfully produced:
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas 935075227 Nov 26 14:27 shared/HITS.pool.root.1
[2025-11-26 14:29:19]  *** Contents of shared directory: ***
[2025-11-26 14:29:19] total 1323660
[2025-11-26 14:29:19] -rw-r--r--. 2 boincer umatlas 411096420 Nov 25 23:24 ATLAS.root_0
[2025-11-26 14:29:19] -rw-r--r--. 2 boincer umatlas    590113 Nov 25 23:24 input.tar.gz
[2025-11-26 14:29:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:24 start_atlas.sh
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas 935075227 Nov 26 14:27 HITS.pool.root.1
[2025-11-26 14:29:19] -rw-------. 1 boincer umatlas   8632320 Nov 26 14:29 result.tar.gz
14:29:21 (1002178): run_atlas exited; CPU time 258577.344546
14:29:21 (1002178): called boinc_finish(0)

</stderr_txt>
]]>

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