Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:30:52 (608649): wrapper (7.7.26015): starting
20:30:52 (608649): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:30:52] Arguments: --nthreads 8
[2025-11-25 20:30:52] Threads: 8
[2025-11-25 20:30:52] Checking for CVMFS
[2025-11-25 20:30:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:30:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:30:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:30:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:30:53] 2.11.3.0 2884895 27907 152228 153309 0 319 25310895 45568001 25308 130560 0 180300780 99.782 111351499 19038 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-25 20:30:53] CVMFS is ok
[2025-11-25 20:30:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:30:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:30:53] Further information can be found at the LHC@home message board.
[2025-11-25 20:30:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:30:53] Checking for apptainer binary...
[2025-11-25 20:30:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:30:53] Running /usr/bin/apptainer --version
[2025-11-25 20:30:53] apptainer version 1.4.1-1.el9
[2025-11-25 20:30:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:30:53] wns0017.triumf.lcg
[2025-11-25 20:30:53] apptainer works
[2025-11-25 20:30:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:30:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:30:53] Starting ATLAS job with PandaID=6897880965
[2025-11-25 20:30:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:36:22]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | wrong length of table data, x=[1764131516.0, 1764131577.0], y=[811.0, 606218.0] (must be same and length>=4)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,358 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,358 | INFO     | ..............................
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . Timing measurements:
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . get job = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . initial setup = 3 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . payload setup = 9 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . stage-in = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . payload execution = 85 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . stage-out = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . log creation = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | ..............................
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897880965/pilotlog.txt
[2025-11-25 20:36:22] 2025-11-26 04:35:17,370 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 20:36:22] - Log from pilotlog.txt -
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897880965/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | INFO     | extracted standard info from prmon json
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | wrong length of table data, x=[1764131516.0, 1764131577.0], y=[811.0, 606218.0] (must be same and length>=4)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,358 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,358 | INFO     | ..............................
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . Timing measurements:
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . get job = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . initial setup = 3 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . payload setup = 9 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . stage-in = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . payload execution = 85 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . stage-out = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . log creation = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | ..............................
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897880965/pilotlog.txt
[2025-11-25 20:36:22] 2025-11-26 04:35:17,370 | WARNING  | 
[2025-11-25 20:36:22] [begin log extracts]
[2025-11-25 20:36:22] - Log from pilotlog.txt -
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897880965/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | INFO     | extracted standard info from prmon json
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:36:22] 2025-11-26 04:35:17,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 20:36:22] 2025-11-26 04:35:17,357 | WARNING  | wrong length of table data, x=[1764131516.0, 1764131577.0], y=[811.0, 606218.0] (must be same and length>=4)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,358 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,358 | INFO     | ..............................
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . Timing measurements:
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . get job = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . initial setup = 3 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . payload setup = 9 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . stage-in = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . payload execution = 85 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . stage-out = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | . log creation = 0 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | ..............................
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 20:36:22] 2025-11-26 04:35:17,359 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897880965/pilotlog.txt
[2025-11-25 20:36:22] [end log extracts]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,370 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,371 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 20:36:22] 2025-11-26 04:35:17,589 | INFO     | 
[2025-11-25 20:36:22] 2025-11-26 04:35:17,589 | INFO     | job summary report
[2025-11-25 20:36:22] 2025-11-26 04:35:17,589 | INFO     | --------------------------------------------------
[2025-11-25 20:36:22] 2025-11-26 04:35:17,589 | INFO     | PanDA job id: 6897880965
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | task id: 47556161
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 20:33:06,539 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | pilot state: failed 
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | transexitcode: 65
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | exeerrorcode: 65
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | exitcode: 65
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | cpuconsumptiontime: 45 s
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | nevents: 0
[2025-11-25 20:36:22] 2025-11-26 04:35:17,590 | INFO     | neventsw: 0
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | pid: 619093
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | pgrp: 619093
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | corecount: 8
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | event service: False
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | sizes: {0: 2284091, 1: 2284290, 7: 2284552, 12: 2284580, 99: 2309971, 100: 2314261, 101: 2314417, 222: 2314583}
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | --------------------------------------------------
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | 
[2025-11-25 20:36:22] 2025-11-26 04:35:17,591 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:36:22] 2025-11-26 04:35:17,609 | INFO     | job 6897880965 has completed (purged errors)
[2025-11-25 20:36:22] 2025-11-26 04:35:17,610 | INFO     | overall cleanup function is called
[2025-11-25 20:36:22] 2025-11-26 04:35:18,618 | INFO     | --- collectZombieJob: --- 10, [619093]
[2025-11-25 20:36:22] 2025-11-26 04:35:18,618 | INFO     | zombie collector waiting for pid 619093
[2025-11-25 20:36:22] 2025-11-26 04:35:18,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:36:22] 2025-11-26 04:35:18,618 | INFO     | collected zombie processes
[2025-11-25 20:36:22] 2025-11-26 04:35:18,619 | INFO     | will attempt to kill all subprocesses of pid=619093
[2025-11-25 20:36:22] 2025-11-26 04:35:18,962 | INFO     | process IDs to be killed: [619093] (in reverse order)
[2025-11-25 20:36:22] 2025-11-26 04:35:19,171 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:36:22] 2025-11-26 04:35:19,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:36:22] 2025-11-26 04:35:19,200 | INFO     | did not find any defunct processes belonging to 619093
[2025-11-25 20:36:22] 2025-11-26 04:35:19,254 | INFO     | did not find any defunct processes belonging to 619093
[2025-11-25 20:36:22] 2025-11-26 04:35:19,255 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:36:22] 2025-11-26 04:35:19,255 | INFO     | ready for new job
[2025-11-25 20:36:22] 2025-11-26 04:35:19,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:36:22] 2025-11-26 04:35:19,297 | INFO     | ***************************************
[2025-11-25 20:36:22] 2025-11-26 04:35:19,297 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:36:22] 2025-11-26 04:35:19,297 | INFO     | ***************************************
[2025-11-25 20:36:22] 2025-11-26 04:35:19,297 | INFO     | 
[2025-11-25 20:36:22] 2025-11-26 04:35:19,299 | INFO     | architecture information:
[2025-11-25 20:36:22] 2025-11-26 04:35:19,314 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:36:22] 2025-11-26 04:35:19,379 | INFO     | cat /etc/os-release:
[2025-11-25 20:36:22] NAME="CentOS Linux"
[2025-11-25 20:36:22] VERSION="7 (Core)"
[2025-11-25 20:36:22] ID="centos"
[2025-11-25 20:36:22] ID_LIKE="rhel fedora"
[2025-11-25 20:36:22] VERSION_ID="7"
[2025-11-25 20:36:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:36:22] ANSI_COLOR="0;31"
[2025-11-25 20:36:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:36:22] HOME_URL="https://www.centos.org/"
[2025-11-25 20:36:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:36:22] 
[2025-11-25 20:36:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:36:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:36:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:36:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:36:22] 
[2025-11-25 20:36:22] 2025-11-26 04:35:19,379 | INFO     | ***************************************
[2025-11-25 20:36:22] 2025-11-26 04:35:19,883 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 20:36:22] 2025-11-26 04:35:19,916 | INFO     | sufficient remaining disk space (1197668827136 B)
[2025-11-25 20:36:22] 2025-11-26 04:35:19,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:36:22] 2025-11-26 04:35:19,917 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:36:22] 2025-11-26 04:35:19,917 | INFO     | update_server=False
[2025-11-25 20:36:22] 2025-11-26 04:35:19,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:36:22] 2025-11-26 04:35:19,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:36:22] 2025-11-26 04:35:19,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:36:22] 2025-11-26 04:35:19,918 | INFO     | aborting loop
[2025-11-25 20:36:22] 2025-11-26 04:35:19,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:36:22] 2025-11-26 04:35:20,030 | INFO     | all data control threads have been joined
[2025-11-25 20:36:22] 2025-11-26 04:35:20,925 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:20,926 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,035 | INFO     | [data] control thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,130 | INFO     | all payload control threads have been joined
[2025-11-25 20:36:22] 2025-11-26 04:35:21,144 | INFO     | all job control threads have been joined
[2025-11-25 20:36:22] 2025-11-26 04:35:21,246 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,331 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,508 | INFO     | [job] validate thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,698 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,772 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,918 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,928 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:21,998 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:22,136 | INFO     | [payload] control thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:22,150 | INFO     | [job] control thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:22,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:36:22] 2025-11-26 04:35:23,457 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:23,927 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:36:22] 2025-11-26 04:35:49,331 | INFO     | PID=612396 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 20:36:22] 2025-11-26 04:35:49,331 | INFO     | .. there are 25 such processes running
[2025-11-25 20:36:22] 2025-11-26 04:35:49,331 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:36:22] 2025-11-26 04:35:49,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:36:22] 2025-11-26 04:35:49,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:36:22] 2025-11-26 04:36:16,379 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:36:22] 2025-11-26 04:36:17,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788409620288)>', '<ExcThread(monitor, started 139787855963904)>']
[2025-11-25 20:36:22] 2025-11-26 04:36:17,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:36:22] 2025-11-26 04:36:17,501 | INFO     | [monitor] control thread has ended
[2025-11-25 20:36:22] 2025-11-26 04:36:22,420 | INFO     | all workflow threads have been joined
[2025-11-25 20:36:22] 2025-11-26 04:36:22,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:36:22] 2025-11-26 04:36:22,421 | INFO     | traces error code: 0
[2025-11-25 20:36:22] 2025-11-26 04:36:22,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:36:22] 2025-11-26 04:36:22,648 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:36:22] 2025-11-26 04:36:22,682 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:36:22] 2025-11-26 04:36:22,713 [wrapper] pilotpid: 612396
[2025-11-25 20:36:22] 2025-11-26 04:36:22,729 [wrapper] Pilot exit status: 0
[2025-11-25 20:36:22] 2025-11-26 04:36:22,745 [wrapper] pandaids: 6897880965
[2025-11-25 20:36:22] 2025-11-26 04:36:22,784 [wrapper] cleanup supervisor_pilot  612402 612397
[2025-11-25 20:36:22] 2025-11-26 04:36:22,786 [wrapper] Test setup, not cleaning
[2025-11-25 20:36:22] 2025-11-26 04:36:22,788 [wrapper] apfmon messages muted
[2025-11-25 20:36:22] 2025-11-26 04:36:22,791 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:36:22] 2025-11-26 04:36:22,793 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:36:22]  *** Error codes and diagnostics ***
[2025-11-25 20:36:22]     "exeErrorCode": 65,
[2025-11-25 20:36:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 20:36:22]     "pilotErrorCode": 1305,
[2025-11-25 20:36:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 20:36:22]  *** Listing of results directory ***
[2025-11-25 20:36:22] total 402660
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc    576529 Nov 25 08:48 pilot3.tar.gz
[2025-11-25 20:36:22] -rwx------. 1 boinc boinc     36292 Nov 25 09:02 runpilot2-wrapper.sh
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc      5112 Nov 25 09:02 queuedata.json
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc       100 Nov 25 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:36:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 20:30 run_atlas
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc       105 Nov 25 20:30 job.xml
[2025-11-25 20:36:22] -rw-r--r--. 2 boinc boinc 408123548 Nov 25 20:30 EVNT.47483658._002353.pool.root.1
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc      6445 Nov 25 20:30 init_data.xml
[2025-11-25 20:36:22] -rw-r--r--. 2 boinc boinc     15847 Nov 25 20:30 start_atlas.sh
[2025-11-25 20:36:22] drwxrwx--x. 2 boinc boinc      4096 Nov 25 20:30 shared
[2025-11-25 20:36:22] -rw-r--r--. 2 boinc boinc    590105 Nov 25 20:30 input.tar.gz
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc         0 Nov 25 20:30 boinc_lockfile
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc      2786 Nov 25 20:30 pandaJob.out
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc    991877 Nov 25 20:31 agis_schedconf.cvmfs.json
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc   1516240 Nov 25 20:31 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:36:22] drwx------. 5 boinc boinc      4096 Nov 25 20:31 pilot3
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc       524 Nov 25 20:32 boinc_task_state.xml
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc      1004 Nov 25 20:33 memory_monitor_summary.json
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc     48748 Nov 25 20:33 log.47556161._003359.job.log.tgz.1
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc     10329 Nov 25 20:35 heartbeat.json
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc        95 Nov 25 20:35 pilot_heartbeat.json
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc      8192 Nov 25 20:36 boinc_mmap_file
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc        23 Nov 25 20:36 wrapper_checkpoint.txt
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc      4822 Nov 25 20:36 pilotlog.txt
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc     97101 Nov 25 20:36 log.47556161._003359.job.log.1
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc       186 Nov 25 20:36 output.list
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc       620 Nov 25 20:36 runtime_log
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc    163840 Nov 25 20:36 result.tar.gz
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc      8634 Nov 25 20:36 runtime_log.err
[2025-11-25 20:36:22] -rw-------. 1 boinc boinc       645 Nov 25 20:36 biZMDmlbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeeMKDmcN1ySo.diag
[2025-11-25 20:36:22] -rw-r--r--. 1 boinc boinc     22459 Nov 25 20:36 stderr.txt
[2025-11-25 20:36:23] No HITS result produced
[2025-11-25 20:36:23]  *** Contents of shared directory: ***
[2025-11-25 20:36:23] total 399320
[2025-11-25 20:36:23] -rw-r--r--. 2 boinc boinc 408123548 Nov 25 20:30 ATLAS.root_0
[2025-11-25 20:36:23] -rw-r--r--. 2 boinc boinc     15847 Nov 25 20:30 start_atlas.sh
[2025-11-25 20:36:23] -rw-r--r--. 2 boinc boinc    590105 Nov 25 20:30 input.tar.gz
[2025-11-25 20:36:23] -rw-------. 1 boinc boinc    163840 Nov 25 20:36 result.tar.gz
20:36:24 (608649): run_atlas exited; CPU time 47.442520
20:36:24 (608649): called boinc_finish(0)

</stderr_txt>
]]>

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