Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:20:53 (34268): wrapper (7.7.26015): starting
23:20:53 (34268): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:20:53] Arguments: --nthreads 8
[2025-11-25 23:20:53] Threads: 8
[2025-11-25 23:20:53] Checking for CVMFS
[2025-11-25 23:20:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:20:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:20:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:20:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:20:55] 2.13.3.0 7030 4881 232728 153309 3 132 22525585 32935936 56799 16776704 0 39558815 99.722 30330200 32550 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:20:55] CVMFS is ok
[2025-11-25 23:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:20:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:20:56] Further information can be found at the LHC@home message board.
[2025-11-25 23:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:20:56] Checking for apptainer binary...
[2025-11-25 23:20:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:20:56] Running /usr/bin/apptainer --version
[2025-11-25 23:20:56] apptainer version 1.4.4-1.el9
[2025-11-25 23:20:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:20:56] lc-10-10.aglt2.org
[2025-11-25 23:20:56] apptainer works
[2025-11-25 23:20:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:20:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:20:56] Starting ATLAS job with PandaID=6897759748
[2025-11-25 23:20:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:36:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:36:40] 2025-11-27 01:33:43,312 | INFO     | monitor loop #3794: job 0:6897759748 is in state 'finished'
[2025-11-26 20:36:40] 2025-11-27 01:33:43,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:36:40] 2025-11-27 01:33:44,088 | INFO     | time since job start (76312s) is within the limit (172800.0s)
[2025-11-26 20:36:40] 2025-11-27 01:33:45,837 | INFO     | monitor loop #3795: job 0:6897759748 is in state 'finished'
[2025-11-26 20:36:40] 2025-11-27 01:33:45,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:36:40] 2025-11-27 01:33:46,095 | INFO     | time since job start (76314s) is within the limit (172800.0s)
[2025-11-26 20:36:40] 2025-11-27 01:33:48,345 | INFO     | monitor loop #3796: job 0:6897759748 is in state 'finished'
[2025-11-26 20:36:40] 2025-11-27 01:33:48,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,074 | INFO     | PID=54460 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 20:36:40] 2025-11-27 01:33:50,075 | INFO     | .. there are 95 such processes running
[2025-11-26 20:36:40] 2025-11-27 01:33:50,371 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 20:36:40] 2025-11-27 01:33:50,382 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2787.74190625
[2025-11-26 20:36:40] 2025-11-27 01:33:50,410 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6897759748/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,410 | INFO     | extracted standard info from prmon json
[2025-11-26 20:36:40] 2025-11-27 01:33:50,410 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:36:40] 2025-11-27 01:33:50,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:36:40] 2025-11-27 01:33:50,428 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:36:40] 2025-11-27 01:33:50,430 | INFO     | sum of square deviations: 604161805586.0251
[2025-11-26 20:36:40] 2025-11-27 01:33:50,457 | INFO     | sum of deviations: 2109607422141.9795
[2025-11-26 20:36:40] 2025-11-27 01:33:50,458 | INFO     | mean x: 1764169101.6749399
[2025-11-26 20:36:40] 2025-11-27 01:33:50,458 | INFO     | mean y: 2867323.0664531626
[2025-11-26 20:36:40] 2025-11-27 01:33:50,458 | INFO     | intersect: -6157244415.869147
[2025-11-26 20:36:40] 2025-11-27 01:33:50,459 | INFO     | chi2: 14.394498001114505
[2025-11-26 20:36:40] 2025-11-27 01:33:50,461 | INFO     | sum of square deviations: 596935498826.9417
[2025-11-26 20:36:40] 2025-11-27 01:33:50,508 | INFO     | sum of deviations: 2523145162185.5005
[2025-11-26 20:36:40] 2025-11-27 01:33:50,509 | INFO     | mean x: 1764168949.181672
[2025-11-26 20:36:40] 2025-11-27 01:33:50,509 | INFO     | mean y: 2876048.214630225
[2025-11-26 20:36:40] 2025-11-27 01:33:50,509 | INFO     | intersect: -7453967041.454063
[2025-11-26 20:36:40] 2025-11-27 01:33:50,510 | INFO     | chi2: 11.252758054467174
[2025-11-26 20:36:40] 2025-11-27 01:33:50,511 | INFO     | current chi2=11.252758054467174 (change=21.825977859068647 %)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,511 | INFO     | right removable region: 1243
[2025-11-26 20:36:40] 2025-11-27 01:33:50,512 | INFO     | sum of square deviations: 596934222706.9418
[2025-11-26 20:36:40] 2025-11-27 01:33:50,539 | INFO     | sum of deviations: 1629864291968.1
[2025-11-26 20:36:40] 2025-11-27 01:33:50,539 | INFO     | mean x: 1764169254.181672
[2025-11-26 20:36:40] 2025-11-27 01:33:50,539 | INFO     | mean y: 2877444.583601286
[2025-11-26 20:36:40] 2025-11-27 01:33:50,539 | INFO     | intersect: -4813995776.957806
[2025-11-26 20:36:40] 2025-11-27 01:33:50,541 | INFO     | chi2: 10.604265843486704
[2025-11-26 20:36:40] 2025-11-27 01:33:50,541 | INFO     | current chi2=10.604265843486704 (change=26.331117329234676 %)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,542 | INFO     | sum of square deviations: 589764652784.4956
[2025-11-26 20:36:40] 2025-11-27 01:33:50,569 | INFO     | sum of deviations: 1403698435156.7263
[2025-11-26 20:36:40] 2025-11-27 01:33:50,569 | INFO     | mean x: 1764169406.686844
[2025-11-26 20:36:40] 2025-11-27 01:33:50,569 | INFO     | mean y: 2882250.5843422115
[2025-11-26 20:36:40] 2025-11-27 01:33:50,569 | INFO     | intersect: -4196016113.0694976
[2025-11-26 20:36:40] 2025-11-27 01:33:50,570 | INFO     | chi2: 9.684027578523747
[2025-11-26 20:36:40] 2025-11-27 01:33:50,571 | INFO     | current chi2=9.684027578523747 (change=8.678000707877214 %)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,571 | INFO     | left removable region: 20
[2025-11-26 20:36:40] 2025-11-27 01:33:50,572 | INFO     | sum of square deviations: 567209874696.0667
[2025-11-26 20:36:40] 2025-11-27 01:33:50,611 | INFO     | sum of deviations: 1746416480600.5703
[2025-11-26 20:36:40] 2025-11-27 01:33:50,612 | INFO     | mean x: 1764169528.7015536
[2025-11-26 20:36:40] 2025-11-27 01:33:50,612 | INFO     | mean y: 2896111.385118561
[2025-11-26 20:36:40] 2025-11-27 01:33:50,612 | INFO     | intersect: -5428911191.244514
[2025-11-26 20:36:40] 2025-11-27 01:33:50,617 | INFO     | chi2: 5.825711979908319
[2025-11-26 20:36:40] 2025-11-27 01:33:50,618 | INFO     | current memory leak: 3.08 B/s (using 1223 data points, chi2=5.83)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,619 | INFO     | could have reported an average CPU frequency of 2731 MHz (45 samples)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,619 | INFO     | ..............................
[2025-11-26 20:36:40] 2025-11-27 01:33:50,619 | INFO     | . Timing measurements:
[2025-11-26 20:36:40] 2025-11-27 01:33:50,619 | INFO     | . get job = 0 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,619 | INFO     | . initial setup = 4 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,619 | INFO     | . payload setup = 34 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,620 | INFO     | . stage-in = 0 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,620 | INFO     | . payload execution = 76173 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,620 | INFO     | . stage-out = 8 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,620 | INFO     | . log creation = 2 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,620 | INFO     | ..............................
[2025-11-26 20:36:40] 2025-11-27 01:33:50,839 | INFO     | 
[2025-11-26 20:36:40] 2025-11-27 01:33:50,839 | INFO     | job summary report
[2025-11-26 20:36:40] 2025-11-27 01:33:50,839 | INFO     | --------------------------------------------------
[2025-11-26 20:36:40] 2025-11-27 01:33:50,839 | INFO     | PanDA job id: 6897759748
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | task id: 47556161
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | errors: (none)
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | pilot state: finished 
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | transexitcode: 0
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | exeerrorcode: 0
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | exeerrordiag: 
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | exitcode: 0
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | exitmsg: OK
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | cpuconsumptiontime: 262060 s
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | nevents: 1000
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | neventsw: 0
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | pid: 99347
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | pgrp: 99347
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | corecount: 8
[2025-11-26 20:36:40] 2025-11-27 01:33:50,840 | INFO     | event service: False
[2025-11-26 20:36:40] 2025-11-27 01:33:50,841 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284321, 26: 2284611, 34: 2284639, 76213: 2343924, 76214: 2343923, 76224: 2352973, 76227: 2353029, 76257: 2353275}
[2025-11-26 20:36:40] 2025-11-27 01:33:50,841 | INFO     | --------------------------------------------------
[2025-11-26 20:36:40] 2025-11-27 01:33:50,841 | INFO     | 
[2025-11-26 20:36:40] 2025-11-27 01:33:50,841 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 20:36:40] 2025-11-27 01:33:51,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | job 6897759748 has completed (purged errors)
[2025-11-26 20:36:40] 2025-11-27 01:33:51,009 | INFO     | overall cleanup function is called
[2025-11-26 20:36:40] 2025-11-27 01:33:52,036 | INFO     | --- collectZombieJob: --- 10, [99347]
[2025-11-26 20:36:40] 2025-11-27 01:33:52,036 | INFO     | zombie collector waiting for pid 99347
[2025-11-26 20:36:40] 2025-11-27 01:33:52,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:36:40] 2025-11-27 01:33:52,037 | INFO     | collected zombie processes
[2025-11-26 20:36:40] 2025-11-27 01:33:52,037 | INFO     | will attempt to kill all subprocesses of pid=99347
[2025-11-26 20:36:40] 2025-11-27 01:33:53,567 | INFO     | process IDs to be killed: [99347] (in reverse order)
[2025-11-26 20:36:40] 2025-11-27 01:33:54,112 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:36:40] 2025-11-27 01:33:54,113 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:36:40] 2025-11-27 01:33:54,225 | INFO     | did not find any defunct processes belonging to 99347
[2025-11-26 20:36:40] 2025-11-27 01:33:54,275 | INFO     | did not find any defunct processes belonging to 99347
[2025-11-26 20:36:40] 2025-11-27 01:33:54,278 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:36:40] 2025-11-27 01:33:54,279 | INFO     | ready for new job
[2025-11-26 20:36:40] 2025-11-27 01:33:54,279 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:36:40] 2025-11-27 01:33:54,305 | INFO     | ***************************************
[2025-11-26 20:36:40] 2025-11-27 01:33:54,305 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:36:40] 2025-11-27 01:33:54,305 | INFO     | ***************************************
[2025-11-26 20:36:40] 2025-11-27 01:33:54,305 | INFO     | 
[2025-11-26 20:36:40] 2025-11-27 01:33:54,311 | INFO     | architecture information:
[2025-11-26 20:36:40] 2025-11-27 01:33:54,317 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:36:40] 2025-11-27 01:33:54,492 | INFO     | cat /etc/os-release:
[2025-11-26 20:36:40] NAME="CentOS Linux"
[2025-11-26 20:36:40] VERSION="7 (Core)"
[2025-11-26 20:36:40] ID="centos"
[2025-11-26 20:36:40] ID_LIKE="rhel fedora"
[2025-11-26 20:36:40] VERSION_ID="7"
[2025-11-26 20:36:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:36:40] ANSI_COLOR="0;31"
[2025-11-26 20:36:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:36:40] HOME_URL="https://www.centos.org/"
[2025-11-26 20:36:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:36:40] 
[2025-11-26 20:36:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:36:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:36:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:36:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:36:40] 
[2025-11-26 20:36:40] 2025-11-27 01:33:54,493 | INFO     | ***************************************
[2025-11-26 20:36:40] 2025-11-27 01:33:54,996 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 20:36:40] 2025-11-27 01:33:55,146 | INFO     | sufficient remaining disk space (82864766976 B)
[2025-11-26 20:36:40] 2025-11-27 01:33:55,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:36:40] 2025-11-27 01:33:55,146 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:36:40] 2025-11-27 01:33:55,146 | INFO     | update_server=False
[2025-11-26 20:36:40] 2025-11-27 01:33:55,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:36:40] 2025-11-27 01:33:55,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:36:40] 2025-11-27 01:33:55,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:36:40] 2025-11-27 01:33:55,152 | INFO     | aborting loop
[2025-11-26 20:36:40] 2025-11-27 01:33:55,481 | INFO     | all payload control threads have been joined
[2025-11-26 20:36:40] 2025-11-27 01:33:55,546 | INFO     | all data control threads have been joined
[2025-11-26 20:36:40] 2025-11-27 01:33:55,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:36:40] 2025-11-27 01:33:55,965 | INFO     | all job control threads have been joined
[2025-11-26 20:36:40] 2025-11-27 01:33:56,162 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,163 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:36:40] 2025-11-27 01:33:56,484 | INFO     | [job] validate thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,487 | INFO     | [payload] control thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,541 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,552 | INFO     | [data] control thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,576 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,595 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,896 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:56,985 | INFO     | [job] control thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:57,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:57,075 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:57,599 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:57,669 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:58,302 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:33:59,170 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:36:40] 2025-11-27 01:34:15,998 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:36:40] 2025-11-27 01:34:17,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783469569856)>', '<ExcThread(monitor, started 139782965409536)>']
[2025-11-26 20:36:40] 2025-11-27 01:34:22,180 | INFO     | all workflow threads have been joined
[2025-11-26 20:36:40] 2025-11-27 01:34:22,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:36:40] 2025-11-27 01:34:22,181 | INFO     | traces error code: 0
[2025-11-26 20:36:40] 2025-11-27 01:34:22,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:36:40] 2025-11-27 01:34:24,160 | INFO     | PID=54460 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 20:36:40] 2025-11-27 01:34:24,165 | INFO     | .. there are 95 such processes running
[2025-11-26 20:36:40] 2025-11-27 01:34:24,165 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:36:40] 2025-11-27 01:34:24,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:36:40] 2025-11-27 01:34:24,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:36:40] 2025-11-27 01:34:24,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:36:40] 2025-11-27 01:34:24,165 | INFO     | [monitor] control thread has ended
[2025-11-26 20:36:40] 2025-11-27 01:34:24,533 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:36:40] 2025-11-27 01:34:24,563 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:36:40] 2025-11-27 01:34:24,601 [wrapper] pilotpid: 54460
[2025-11-26 20:36:40] 2025-11-27 01:34:24,645 [wrapper] Pilot exit status: 0
[2025-11-26 20:36:40] 2025-11-27 01:34:24,768 [wrapper] pandaids: 6897759748
[2025-11-26 20:36:40] 2025-11-27 01:34:25,000 [wrapper] cleanup supervisor_pilot  858247 54461
[2025-11-26 20:36:40] 2025-11-27 01:34:25,032 [wrapper] Test setup, not cleaning
[2025-11-26 20:36:40] 2025-11-27 01:34:25,042 [wrapper] apfmon messages muted
[2025-11-26 20:36:40] 2025-11-27 01:34:25,044 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:36:40] 2025-11-27 01:34:25,047 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:36:40]  *** Error codes and diagnostics ***
[2025-11-26 20:36:40]     "exeErrorCode": 0,
[2025-11-26 20:36:40]     "exeErrorDiag": "",
[2025-11-26 20:36:40]     "pilotErrorCode": 0,
[2025-11-26 20:36:40]     "pilotErrorDiag": "",
[2025-11-26 20:36:40]  *** Listing of results directory ***
[2025-11-26 20:36:40] total 1340696
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 20:36:40] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:36:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:20 run_atlas
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:20 job.xml
[2025-11-26 20:36:40] -rw-r--r--. 2 boincer umatlas 410357770 Nov 25 23:20 EVNT.47483658._002326.pool.root.1
[2025-11-26 20:36:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:20 start_atlas.sh
[2025-11-26 20:36:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:20 shared
[2025-11-26 20:36:40] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 23:20 input.tar.gz
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:20 boinc_lockfile
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 23:20 pandaJob.out
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas        57 Nov 25 23:20 setup.sh.local
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas    991877 Nov 25 23:21 agis_schedconf.cvmfs.json
[2025-11-26 20:36:40] drwx------. 5 boincer umatlas      4096 Nov 25 23:21 pilot3
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:12 boinc_task_state.xml
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas      6885 Nov 26 20:31 init_data.xml
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas 936878882 Nov 26 20:32 HITS.47556161._003083.pool.root.1
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas      1060 Nov 26 20:33 memory_monitor_summary.json
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:33 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas   2253238 Nov 26 20:33 log.47556161._003083.job.log.tgz.1
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas        95 Nov 26 20:33 pilot_heartbeat.json
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas      8622 Nov 26 20:33 heartbeat.json
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas       821 Nov 26 20:34 pilotlog.txt
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas   8604414 Nov 26 20:34 log.47556161._003083.job.log.1
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas       353 Nov 26 20:34 output.list
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:34 runtime_log
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas  10874880 Nov 26 20:34 result.tar.gz
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas       660 Nov 26 20:34 WEgNDmXbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHjJKDmMDE23m.diag
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 20:34 runtime_log.err
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:36 wrapper_checkpoint.txt
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:36 boinc_mmap_file
[2025-11-26 20:36:40] -rw-r--r--. 1 boincer umatlas     21646 Nov 26 20:36 stderr.txt
[2025-11-26 20:36:40] HITS file was successfully produced:
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas 936878882 Nov 26 20:32 shared/HITS.pool.root.1
[2025-11-26 20:36:40]  *** Contents of shared directory: ***
[2025-11-26 20:36:40] total 1326892
[2025-11-26 20:36:40] -rw-r--r--. 2 boincer umatlas 410357770 Nov 25 23:20 ATLAS.root_0
[2025-11-26 20:36:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:20 start_atlas.sh
[2025-11-26 20:36:40] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 23:20 input.tar.gz
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas 936878882 Nov 26 20:32 HITS.pool.root.1
[2025-11-26 20:36:40] -rw-------. 1 boincer umatlas  10874880 Nov 26 20:34 result.tar.gz
20:36:41 (34268): run_atlas exited; CPU time 266112.550323
20:36:41 (34268): called boinc_finish(0)

</stderr_txt>
]]>

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