Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:08:28 (25842): wrapper (7.7.26015): starting
23:08:28 (25842): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 23:08:28] Arguments: --nthreads 12
[2025-11-25 23:08:28] Threads: 12
[2025-11-25 23:08:28] Checking for CVMFS
[2025-11-25 23:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:08:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:08:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:08:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:08:28] 2.11.2.0 2924 287136 98672 153307 2 82 17277550 20275200 1 130560 4 131041075 99.966 17340035 14067 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 23:08:28] CVMFS is ok
[2025-11-25 23:08:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:08:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:08:28] Further information can be found at the LHC@home message board.
[2025-11-25 23:08:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:08:28] Checking for apptainer binary...
[2025-11-25 23:08:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:08:28] Running /usr/bin/apptainer --version
[2025-11-25 23:08:28] apptainer version 1.3.2-1.el7
[2025-11-25 23:08:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:08:30] c-205-28.aglt2.org
[2025-11-25 23:08:30] apptainer works
[2025-11-25 23:08:30] Set ATHENA_PROC_NUMBER=12
[2025-11-25 23:08:30] Set ATHENA_CORE_NUMBER=12
[2025-11-25 23:08:30] Starting ATLAS job with PandaID=6897661777
[2025-11-25 23:08:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:20:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:20:33] 2025-11-26 11:19:34,312 | INFO     | time since job start (25849s) is within the limit (172800.0s)
[2025-11-26 06:20:33] 2025-11-26 11:19:36,317 | INFO     | time since job start (25851s) is within the limit (172800.0s)
[2025-11-26 06:20:33] 2025-11-26 11:19:36,664 | INFO     | monitor loop #1936: job 0:6897661777 is in state 'finished'
[2025-11-26 06:20:33] 2025-11-26 11:19:36,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,735 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 06:20:33] 2025-11-26 11:19:37,739 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-26 06:20:33] 2025-11-26 11:19:37,742 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897661777/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,743 | INFO     | extracted standard info from prmon json
[2025-11-26 06:20:33] 2025-11-26 11:19:37,743 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:20:33] 2025-11-26 11:19:37,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:20:33] 2025-11-26 11:19:37,750 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:20:33] 2025-11-26 11:19:37,750 | INFO     | sum of square deviations: 23636192661.809048
[2025-11-26 06:20:33] 2025-11-26 11:19:37,754 | INFO     | sum of deviations: 365605542704.80194
[2025-11-26 06:20:33] 2025-11-26 11:19:37,754 | INFO     | mean x: 1764143056.7287736
[2025-11-26 06:20:33] 2025-11-26 11:19:37,754 | INFO     | mean y: 3407657.3113207547
[2025-11-26 06:20:33] 2025-11-26 11:19:37,755 | INFO     | intersect: -27284425408.391335
[2025-11-26 06:20:33] 2025-11-26 11:19:37,755 | INFO     | chi2: 6.8293932831446345
[2025-11-26 06:20:33] 2025-11-26 11:19:37,756 | INFO     | sum of square deviations: 22809862566.54435
[2025-11-26 06:20:33] 2025-11-26 11:19:37,759 | INFO     | sum of deviations: 531561340307.5949
[2025-11-26 06:20:33] 2025-11-26 11:19:37,759 | INFO     | mean x: 1764142904.2315035
[2025-11-26 06:20:33] 2025-11-26 11:19:37,760 | INFO     | mean y: 3438254.818615752
[2025-11-26 06:20:33] 2025-11-26 11:19:37,760 | INFO     | intersect: -41108171424.18255
[2025-11-26 06:20:33] 2025-11-26 11:19:37,760 | INFO     | chi2: 3.647478728361369
[2025-11-26 06:20:33] 2025-11-26 11:19:37,760 | INFO     | current chi2=3.647478728361369 (change=46.591467541288445 %)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,761 | INFO     | sum of square deviations: 22003021208.773
[2025-11-26 06:20:33] 2025-11-26 11:19:37,764 | INFO     | sum of deviations: 608566095752.8215
[2025-11-26 06:20:33] 2025-11-26 11:19:37,765 | INFO     | mean x: 1764142751.7342994
[2025-11-26 06:20:33] 2025-11-26 11:19:37,765 | INFO     | mean y: 3452775.2801932367
[2025-11-26 06:20:33] 2025-11-26 11:19:37,765 | INFO     | intersect: -48789731423.69332
[2025-11-26 06:20:33] 2025-11-26 11:19:37,765 | INFO     | chi2: 2.766824395601837
[2025-11-26 06:20:33] 2025-11-26 11:19:37,765 | INFO     | current chi2=2.766824395601837 (change=24.14419379369942 %)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,766 | INFO     | right removable region: 413
[2025-11-26 06:20:33] 2025-11-26 11:19:37,766 | INFO     | sum of square deviations: 22809803396.544342
[2025-11-26 06:20:33] 2025-11-26 11:19:37,770 | INFO     | sum of deviations: 216840882657.8379
[2025-11-26 06:20:33] 2025-11-26 11:19:37,770 | INFO     | mean x: 1764143209.2315035
[2025-11-26 06:20:33] 2025-11-26 11:19:37,770 | INFO     | mean y: 3435040.5274463007
[2025-11-26 06:20:33] 2025-11-26 11:19:37,770 | INFO     | intersect: -16767352676.237534
[2025-11-26 06:20:33] 2025-11-26 11:19:37,771 | INFO     | chi2: 4.307592667870765
[2025-11-26 06:20:33] 2025-11-26 11:19:37,771 | INFO     | current chi2=4.307592667870765 (change=36.9256903317873 %)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,771 | INFO     | sum of square deviations: 22002902868.773003
[2025-11-26 06:20:33] 2025-11-26 11:19:37,775 | INFO     | sum of deviations: 177631375047.15018
[2025-11-26 06:20:33] 2025-11-26 11:19:37,775 | INFO     | mean x: 1764143361.7342994
[2025-11-26 06:20:33] 2025-11-26 11:19:37,775 | INFO     | mean y: 3442445.2922705314
[2025-11-26 06:20:33] 2025-11-26 11:19:37,776 | INFO     | intersect: -14238642473.870974
[2025-11-26 06:20:33] 2025-11-26 11:19:37,776 | INFO     | chi2: 4.216211384365453
[2025-11-26 06:20:33] 2025-11-26 11:19:37,776 | INFO     | current chi2=4.216211384365453 (change=2.121400293646647 %)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,776 | INFO     | left removable region: 20
[2025-11-26 06:20:33] 2025-11-26 11:19:37,777 | INFO     | sum of square deviations: 18821668046.035503
[2025-11-26 06:20:33] 2025-11-26 11:19:37,780 | INFO     | sum of deviations: 363206322427.40466
[2025-11-26 06:20:33] 2025-11-26 11:19:37,780 | INFO     | mean x: 1764143331.2417302
[2025-11-26 06:20:33] 2025-11-26 11:19:37,780 | INFO     | mean y: 3501092.816793893
[2025-11-26 06:20:33] 2025-11-26 11:19:37,780 | INFO     | intersect: -34039603376.348648
[2025-11-26 06:20:33] 2025-11-26 11:19:37,781 | INFO     | chi2: 0.05771000234802772
[2025-11-26 06:20:33] 2025-11-26 11:19:37,781 | INFO     | current memory leak: 19.30 B/s (using 393 data points, chi2=0.06)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,781 | INFO     | could have reported an average CPU frequency of 2363 MHz (18 samples)
[2025-11-26 06:20:33] 2025-11-26 11:19:37,781 | INFO     | ..............................
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . Timing measurements:
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . get job = 0 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . initial setup = 2 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . payload setup = 7 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . stage-in = 0 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . payload execution = 25813 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . stage-out = 3 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | . log creation = 0 s
[2025-11-26 06:20:33] 2025-11-26 11:19:37,782 | INFO     | ..............................
[2025-11-26 06:20:33] 2025-11-26 11:19:38,107 | INFO     | 
[2025-11-26 06:20:33] 2025-11-26 11:19:38,108 | INFO     | job summary report
[2025-11-26 06:20:33] 2025-11-26 11:19:38,108 | INFO     | --------------------------------------------------
[2025-11-26 06:20:33] 2025-11-26 11:19:38,108 | INFO     | PanDA job id: 6897661777
[2025-11-26 06:20:33] 2025-11-26 11:19:38,108 | INFO     | task id: 47556161
[2025-11-26 06:20:33] 2025-11-26 11:19:38,108 | INFO     | errors: (none)
[2025-11-26 06:20:33] 2025-11-26 11:19:38,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:20:33] 2025-11-26 11:19:38,109 | INFO     | pilot state: finished 
[2025-11-26 06:20:33] 2025-11-26 11:19:38,109 | INFO     | transexitcode: 0
[2025-11-26 06:20:33] 2025-11-26 11:19:38,109 | INFO     | exeerrorcode: 0
[2025-11-26 06:20:33] 2025-11-26 11:19:38,109 | INFO     | exeerrordiag: 
[2025-11-26 06:20:33] 2025-11-26 11:19:38,109 | INFO     | exitcode: 0
[2025-11-26 06:20:33] 2025-11-26 11:19:38,109 | INFO     | exitmsg: OK
[2025-11-26 06:20:33] 2025-11-26 11:19:38,110 | INFO     | cpuconsumptiontime: 295523 s
[2025-11-26 06:20:33] 2025-11-26 11:19:38,110 | INFO     | nevents: 1000
[2025-11-26 06:20:33] 2025-11-26 11:19:38,110 | INFO     | neventsw: 0
[2025-11-26 06:20:33] 2025-11-26 11:19:38,110 | INFO     | pid: 3656
[2025-11-26 06:20:33] 2025-11-26 11:19:38,110 | INFO     | pgrp: 3656
[2025-11-26 06:20:33] 2025-11-26 11:19:38,110 | INFO     | corecount: 12
[2025-11-26 06:20:33] 2025-11-26 11:19:38,111 | INFO     | event service: False
[2025-11-26 06:20:33] 2025-11-26 11:19:38,111 | INFO     | sizes: {0: 2284265, 5: 2284527, 11: 2284583, 25825: 2321847, 25829: 2330841, 25831: 2330897, 25836: 2331271}
[2025-11-26 06:20:33] 2025-11-26 11:19:38,111 | INFO     | --------------------------------------------------
[2025-11-26 06:20:33] 2025-11-26 11:19:38,111 | INFO     | 
[2025-11-26 06:20:33] 2025-11-26 11:19:38,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 06:20:33] 2025-11-26 11:19:38,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:20:33] 2025-11-26 11:19:38,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:20:33] 2025-11-26 11:19:38,141 | INFO     | job 6897661777 has completed (purged errors)
[2025-11-26 06:20:33] 2025-11-26 11:19:38,142 | INFO     | overall cleanup function is called
[2025-11-26 06:20:33] 2025-11-26 11:19:39,158 | INFO     | --- collectZombieJob: --- 10, [3656]
[2025-11-26 06:20:33] 2025-11-26 11:19:39,158 | INFO     | zombie collector waiting for pid 3656
[2025-11-26 06:20:33] 2025-11-26 11:19:39,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:20:33] 2025-11-26 11:19:39,159 | INFO     | collected zombie processes
[2025-11-26 06:20:33] 2025-11-26 11:19:39,159 | INFO     | will attempt to kill all subprocesses of pid=3656
[2025-11-26 06:20:33] 2025-11-26 11:19:39,253 | INFO     | process IDs to be killed: [3656] (in reverse order)
[2025-11-26 06:20:33] 2025-11-26 11:19:39,305 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:20:33] 2025-11-26 11:19:39,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:20:33] 2025-11-26 11:19:39,309 | INFO     | did not find any defunct processes belonging to 3656
[2025-11-26 06:20:33] 2025-11-26 11:19:39,313 | INFO     | did not find any defunct processes belonging to 3656
[2025-11-26 06:20:33] 2025-11-26 11:19:39,315 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:20:33] 2025-11-26 11:19:39,315 | INFO     | ready for new job
[2025-11-26 06:20:33] 2025-11-26 11:19:39,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:20:33] 2025-11-26 11:19:39,318 | INFO     | ***************************************
[2025-11-26 06:20:33] 2025-11-26 11:19:39,318 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:20:33] 2025-11-26 11:19:39,318 | INFO     | ***************************************
[2025-11-26 06:20:33] 2025-11-26 11:19:39,318 | INFO     | 
[2025-11-26 06:20:33] 2025-11-26 11:19:39,319 | INFO     | architecture information:
[2025-11-26 06:20:33] 2025-11-26 11:19:39,319 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:20:33] 2025-11-26 11:19:39,335 | INFO     | cat /etc/os-release:
[2025-11-26 06:20:33] NAME="CentOS Linux"
[2025-11-26 06:20:33] VERSION="7 (Core)"
[2025-11-26 06:20:33] ID="centos"
[2025-11-26 06:20:33] ID_LIKE="rhel fedora"
[2025-11-26 06:20:33] VERSION_ID="7"
[2025-11-26 06:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:20:33] ANSI_COLOR="0;31"
[2025-11-26 06:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:20:33] HOME_URL="https://www.centos.org/"
[2025-11-26 06:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:20:33] 
[2025-11-26 06:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:20:33] 
[2025-11-26 06:20:33] 2025-11-26 11:19:39,335 | INFO     | ***************************************
[2025-11-26 06:20:33] 2025-11-26 11:19:39,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 06:20:33] 2025-11-26 11:19:39,855 | INFO     | sufficient remaining disk space (28253880320 B)
[2025-11-26 06:20:33] 2025-11-26 11:19:39,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:20:33] 2025-11-26 11:19:39,856 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:20:33] 2025-11-26 11:19:39,856 | INFO     | update_server=False
[2025-11-26 06:20:33] 2025-11-26 11:19:39,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:20:33] 2025-11-26 11:19:39,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:20:33] 2025-11-26 11:19:40,156 | INFO     | all data control threads have been joined
[2025-11-26 06:20:33] 2025-11-26 11:19:40,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:20:33] 2025-11-26 11:19:40,169 | INFO     | aborting loop
[2025-11-26 06:20:33] 2025-11-26 11:19:40,383 | INFO     | all job control threads have been joined
[2025-11-26 06:20:33] 2025-11-26 11:19:40,862 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:40,862 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:20:33] 2025-11-26 11:19:41,117 | INFO     | all payload control threads have been joined
[2025-11-26 06:20:33] 2025-11-26 11:19:41,143 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,160 | INFO     | [data] control thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,174 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,386 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,388 | INFO     | [job] control thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,566 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:41,609 | INFO     | [job] validate thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:42,011 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:42,122 | INFO     | [payload] control thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:42,264 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:42,349 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:42,351 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:43,064 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:19:43,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:20:33] 2025-11-26 11:19:47,351 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:20:33] 2025-11-26 11:20:09,517 | INFO     | PID=29523 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:20:33] 2025-11-26 11:20:09,517 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:20:33] 2025-11-26 11:20:09,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:20:33] 2025-11-26 11:20:09,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:20:33] 2025-11-26 11:20:27,073 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:20:33] 2025-11-26 11:20:28,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047420983104)>', '<ExcThread(monitor, started 140046434809600)>']
[2025-11-26 06:20:33] 2025-11-26 11:20:28,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:20:33] 2025-11-26 11:20:28,611 | INFO     | [monitor] control thread has ended
[2025-11-26 06:20:33] 2025-11-26 11:20:33,376 | INFO     | all workflow threads have been joined
[2025-11-26 06:20:33] 2025-11-26 11:20:33,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:20:33] 2025-11-26 11:20:33,377 | INFO     | traces error code: 0
[2025-11-26 06:20:33] 2025-11-26 11:20:33,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:20:33] 2025-11-26 11:20:33,473 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:20:33] 2025-11-26 11:20:33,477 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:20:33] 2025-11-26 11:20:33,481 [wrapper] pilotpid: 29523
[2025-11-26 06:20:33] 2025-11-26 11:20:33,485 [wrapper] Pilot exit status: 0
[2025-11-26 06:20:33] 2025-11-26 11:20:33,499 [wrapper] pandaids: 6897661777
[2025-11-26 06:20:33] 2025-11-26 11:20:33,546 [wrapper] cleanup supervisor_pilot 26974 29524
[2025-11-26 06:20:33] 2025-11-26 11:20:33,550 [wrapper] Test setup, not cleaning
[2025-11-26 06:20:33] 2025-11-26 11:20:33,554 [wrapper] apfmon messages muted
[2025-11-26 06:20:33] 2025-11-26 11:20:33,558 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:20:33] 2025-11-26 11:20:33,563 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:20:33]  *** Error codes and diagnostics ***
[2025-11-26 06:20:33]     "exeErrorCode": 0,
[2025-11-26 06:20:33]     "exeErrorDiag": "",
[2025-11-26 06:20:33]     "pilotErrorCode": 0,
[2025-11-26 06:20:33]     "pilotErrorDiag": "",
[2025-11-26 06:20:33]  *** Listing of results directory ***
[2025-11-26 06:20:33] total 1304764
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 06:20:33] -rwx------ 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas       100 Nov 25 23:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:20:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 23:08 run_atlas
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas       105 Nov 25 23:08 job.xml
[2025-11-26 06:20:33] -rw-r--r-- 2 boincer umatlas 410896287 Nov 25 23:08 EVNT.47483658._002315.pool.root.1
[2025-11-26 06:20:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 23:08 start_atlas.sh
[2025-11-26 06:20:33] drwxrwx--x 2 boincer umatlas      4096 Nov 25 23:08 shared
[2025-11-26 06:20:33] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 23:08 input.tar.gz
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas         0 Nov 25 23:08 boinc_lockfile
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 23:08 pandaJob.out
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas        57 Nov 25 23:08 setup.sh.local
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas    991877 Nov 25 23:08 agis_schedconf.cvmfs.json
[2025-11-26 06:20:33] drwx------ 5 boincer umatlas      4096 Nov 25 23:08 pilot3
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas       532 Nov 26 06:09 boinc_task_state.xml
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 06:09 init_data.xml
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas 909604364 Nov 26 06:18 HITS.47556161._002985.pool.root.1
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas      1061 Nov 26 06:19 memory_monitor_summary.json
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas   1516240 Nov 26 06:19 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas   2193965 Nov 26 06:19 log.47556161._002985.job.log.tgz.1
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas      8666 Nov 26 06:19 heartbeat.json
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas        95 Nov 26 06:20 pilot_heartbeat.json
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:20 boinc_mmap_file
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas        29 Nov 26 06:20 wrapper_checkpoint.txt
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas      4746 Nov 26 06:20 pilotlog.txt
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas   3633184 Nov 26 06:20 log.47556161._002985.job.log.1
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas       353 Nov 26 06:20 output.list
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:20 runtime_log
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas   5847040 Nov 26 06:20 result.tar.gz
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas       670 Nov 26 06:20 xaoKDmXbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1hJKDmNtNZYn.diag
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 06:20 runtime_log.err
[2025-11-26 06:20:33] -rw-r--r-- 1 boincer umatlas     21315 Nov 26 06:20 stderr.txt
[2025-11-26 06:20:33] HITS file was successfully produced:
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas 909604364 Nov 26 06:18 shared/HITS.pool.root.1
[2025-11-26 06:20:33]  *** Contents of shared directory: ***
[2025-11-26 06:20:33] total 1295868
[2025-11-26 06:20:33] -rw-r--r-- 2 boincer umatlas 410896287 Nov 25 23:08 ATLAS.root_0
[2025-11-26 06:20:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 23:08 start_atlas.sh
[2025-11-26 06:20:33] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 23:08 input.tar.gz
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas 909604364 Nov 26 06:18 HITS.pool.root.1
[2025-11-26 06:20:33] -rw------- 1 boincer umatlas   5847040 Nov 26 06:20 result.tar.gz
06:20:34 (25842): run_atlas exited; CPU time 288877.905087
06:20:34 (25842): called boinc_finish(0)

</stderr_txt>
]]>

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