Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:14:19 (31937): wrapper (7.7.26015): starting
02:14:19 (31937): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 02:14:19] Arguments: --nthreads 8
[2025-11-28 02:14:19] Threads: 8
[2025-11-28 02:14:19] Checking for CVMFS
[2025-11-28 02:14:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 02:14:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 02:14:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 02:14:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 02:14:21] 2.11.2.0 28532 287509 137640 153391 3 85 21944753 25165824 1288 130560 16 127439697 99.873 78239002 2915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 02:14:21] CVMFS is ok
[2025-11-28 02:14:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 02:14:21] Checking for apptainer binary...
[2025-11-28 02:14:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 02:14:21] Running /usr/bin/apptainer --version
[2025-11-28 02:14:21] apptainer version 1.3.2-1.el7
[2025-11-28 02:14:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 02:14:37] cg-vwn472.simple-grid.lan
[2025-11-28 02:14:37] apptainer works
[2025-11-28 02:14:37] Set ATHENA_PROC_NUMBER=8
[2025-11-28 02:14:37] Set ATHENA_CORE_NUMBER=8
[2025-11-28 02:14:37] Starting ATLAS job with PandaID=6897531739
[2025-11-28 02:14:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 22:56:53]  *** The last 200 lines of the pilot log: ***
[2025-11-28 22:56:53] 2025-11-28 21:56:20,861 | INFO     | fitting pss+swap vs Time
[2025-11-28 22:56:53] 2025-11-28 21:56:20,863 | INFO     | sum of square deviations: 549333316087.323
[2025-11-28 22:56:53] 2025-11-28 21:56:20,911 | INFO     | sum of deviations: 3570810959620.609
[2025-11-28 22:56:53] 2025-11-28 21:56:20,912 | INFO     | mean x: 1764330061.5512397
[2025-11-28 22:56:53] 2025-11-28 21:56:20,912 | INFO     | mean y: 2856621.1190082645
[2025-11-28 22:56:53] 2025-11-28 21:56:20,912 | INFO     | intersect: -11465752574.202028
[2025-11-28 22:56:53] 2025-11-28 21:56:20,913 | INFO     | chi2: 15.821495355218799
[2025-11-28 22:56:53] 2025-11-28 21:56:20,915 | INFO     | sum of square deviations: 542551911769.27435
[2025-11-28 22:56:53] 2025-11-28 21:56:20,954 | INFO     | sum of deviations: 3981866472972.723
[2025-11-28 22:56:53] 2025-11-28 21:56:20,954 | INFO     | mean x: 1764329909.0556016
[2025-11-28 22:56:53] 2025-11-28 21:56:20,955 | INFO     | mean y: 2865863.9145228215
[2025-11-28 22:56:53] 2025-11-28 21:56:20,955 | INFO     | intersect: -12945804963.217508
[2025-11-28 22:56:53] 2025-11-28 21:56:20,956 | INFO     | chi2: 12.671842305807228
[2025-11-28 22:56:53] 2025-11-28 21:56:20,956 | INFO     | current chi2=12.671842305807228 (change=19.90742959939398 %)
[2025-11-28 22:56:53] 2025-11-28 21:56:20,956 | INFO     | right removable region: 1204
[2025-11-28 22:56:53] 2025-11-28 21:56:20,958 | INFO     | sum of square deviations: 542551135849.2745
[2025-11-28 22:56:53] 2025-11-28 21:56:20,996 | INFO     | sum of deviations: 3057584636874.8433
[2025-11-28 22:56:53] 2025-11-28 21:56:20,996 | INFO     | mean x: 1764330214.0556016
[2025-11-28 22:56:53] 2025-11-28 21:56:20,997 | INFO     | mean y: 2868160.8381742737
[2025-11-28 22:56:53] 2025-11-28 21:56:20,997 | INFO     | intersect: -9940137392.778759
[2025-11-28 22:56:53] 2025-11-28 21:56:20,998 | INFO     | chi2: 10.902128518649278
[2025-11-28 22:56:53] 2025-11-28 21:56:20,998 | INFO     | current chi2=10.902128518649278 (change=31.092932280556173 %)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,000 | INFO     | sum of square deviations: 535825003173.6799
[2025-11-28 22:56:53] 2025-11-28 21:56:21,039 | INFO     | sum of deviations: 2595344367072.636
[2025-11-28 22:56:53] 2025-11-28 21:56:21,039 | INFO     | mean x: 1764330366.56
[2025-11-28 22:56:53] 2025-11-28 21:56:21,039 | INFO     | mean y: 2878640.4425
[2025-11-28 22:56:53] 2025-11-28 21:56:21,039 | INFO     | intersect: -8542905620.062537
[2025-11-28 22:56:53] 2025-11-28 21:56:21,041 | INFO     | chi2: 7.053989815692543
[2025-11-28 22:56:53] 2025-11-28 21:56:21,041 | INFO     | current chi2=7.053989815692543 (change=35.29713208181388 %)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,043 | INFO     | sum of square deviations: 529154685498.0388
[2025-11-28 22:56:53] 2025-11-28 21:56:21,081 | INFO     | sum of deviations: 2203887420296.1006
[2025-11-28 22:56:53] 2025-11-28 21:56:21,081 | INFO     | mean x: 1764330519.0644352
[2025-11-28 22:56:53] 2025-11-28 21:56:21,081 | INFO     | mean y: 2887590.362343096
[2025-11-28 22:56:53] 2025-11-28 21:56:21,081 | INFO     | intersect: -7345409500.781924
[2025-11-28 22:56:53] 2025-11-28 21:56:21,083 | INFO     | chi2: 4.390315868293089
[2025-11-28 22:56:53] 2025-11-28 21:56:21,083 | INFO     | current chi2=4.390315868293089 (change=37.76123891579422 %)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,085 | INFO     | sum of square deviations: 522540241476.3874
[2025-11-28 22:56:53] 2025-11-28 21:56:21,120 | INFO     | sum of deviations: 2043801662714.625
[2025-11-28 22:56:53] 2025-11-28 21:56:21,120 | INFO     | mean x: 1764330671.5655463
[2025-11-28 22:56:53] 2025-11-28 21:56:21,120 | INFO     | mean y: 2891276.844537815
[2025-11-28 22:56:53] 2025-11-28 21:56:21,120 | INFO     | intersect: -6897901569.149162
[2025-11-28 22:56:53] 2025-11-28 21:56:21,121 | INFO     | chi2: 3.8899308794534306
[2025-11-28 22:56:53] 2025-11-28 21:56:21,122 | INFO     | current chi2=3.8899308794534306 (change=11.397471249243011 %)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,122 | INFO     | left removable region: 40
[2025-11-28 22:56:53] 2025-11-28 21:56:21,123 | INFO     | sum of square deviations: 489033135291.2237
[2025-11-28 22:56:53] 2025-11-28 21:56:21,158 | INFO     | sum of deviations: 2289032352246.85
[2025-11-28 22:56:53] 2025-11-28 21:56:21,158 | INFO     | mean x: 1764331098.5704467
[2025-11-28 22:56:53] 2025-11-28 21:56:21,158 | INFO     | mean y: 2906693.1176975947
[2025-11-28 22:56:53] 2025-11-28 21:56:21,158 | INFO     | intersect: -8255451837.737167
[2025-11-28 22:56:53] 2025-11-28 21:56:21,160 | INFO     | chi2: 0.40276739090239055
[2025-11-28 22:56:53] 2025-11-28 21:56:21,160 | INFO     | current memory leak: 4.68 B/s (using 1164 data points, chi2=0.40)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,161 | INFO     | could have reported an average CPU frequency of 2249 MHz (41 samples)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,161 | INFO     | ..............................
[2025-11-28 22:56:53] 2025-11-28 21:56:21,161 | INFO     | . Timing measurements:
[2025-11-28 22:56:53] 2025-11-28 21:56:21,161 | INFO     | . get job = 0 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,161 | INFO     | . initial setup = 8 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,161 | INFO     | . payload setup = 131 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,162 | INFO     | . stage-in = 0 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,162 | INFO     | . payload execution = 73930 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,162 | INFO     | . stage-out = 2 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,162 | INFO     | . log creation = 0 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,162 | INFO     | ..............................
[2025-11-28 22:56:53] 2025-11-28 21:56:21,290 | INFO     | 
[2025-11-28 22:56:53] 2025-11-28 21:56:21,290 | INFO     | job summary report
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | --------------------------------------------------
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | PanDA job id: 6897531739
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | task id: 47556161
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | errors: (none)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | pilot state: finished 
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | transexitcode: 0
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | exeerrorcode: 0
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | exeerrordiag: 
[2025-11-28 22:56:53] 2025-11-28 21:56:21,291 | INFO     | exitcode: 0
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | exitmsg: OK
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | cpuconsumptiontime: 278515 s
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | nevents: 1000
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | neventsw: 0
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | pid: 9854
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | pgrp: 9854
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | corecount: 8
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | event service: False
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284321, 33: 2284349, 44: 2284405, 55: 2284561, 66: 2284589, 76: 2284617, 87: 2284673, 96: 2284963, 98: 2285271, 7
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | --------------------------------------------------
[2025-11-28 22:56:53] 2025-11-28 21:56:21,292 | INFO     | 
[2025-11-28 22:56:53] 2025-11-28 21:56:21,293 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-28 22:56:53] 2025-11-28 21:56:21,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,324 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 22:56:53] 2025-11-28 21:56:21,325 | INFO     | job 6897531739 has completed (purged errors)
[2025-11-28 22:56:53] 2025-11-28 21:56:21,326 | INFO     | overall cleanup function is called
[2025-11-28 22:56:53] 2025-11-28 21:56:22,342 | INFO     | --- collectZombieJob: --- 10, [9854]
[2025-11-28 22:56:53] 2025-11-28 21:56:22,342 | INFO     | zombie collector waiting for pid 9854
[2025-11-28 22:56:53] 2025-11-28 21:56:22,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 22:56:53] 2025-11-28 21:56:22,343 | INFO     | collected zombie processes
[2025-11-28 22:56:53] 2025-11-28 21:56:22,343 | INFO     | will attempt to kill all subprocesses of pid=9854
[2025-11-28 22:56:53] 2025-11-28 21:56:22,436 | INFO     | process IDs to be killed: [9854] (in reverse order)
[2025-11-28 22:56:53] 2025-11-28 21:56:22,484 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 22:56:53] 2025-11-28 21:56:22,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 22:56:53] 2025-11-28 21:56:22,487 | INFO     | did not find any defunct processes belonging to 9854
[2025-11-28 22:56:53] 2025-11-28 21:56:22,490 | INFO     | did not find any defunct processes belonging to 9854
[2025-11-28 22:56:53] 2025-11-28 21:56:22,492 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 22:56:53] 2025-11-28 21:56:22,492 | INFO     | ready for new job
[2025-11-28 22:56:53] 2025-11-28 21:56:22,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 22:56:53] 2025-11-28 21:56:22,497 | INFO     | ***************************************
[2025-11-28 22:56:53] 2025-11-28 21:56:22,497 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 22:56:53] 2025-11-28 21:56:22,497 | INFO     | ***************************************
[2025-11-28 22:56:53] 2025-11-28 21:56:22,497 | INFO     | 
[2025-11-28 22:56:53] 2025-11-28 21:56:22,498 | INFO     | pilot is running in a VM
[2025-11-28 22:56:53] 2025-11-28 21:56:22,498 | INFO     | architecture information:
[2025-11-28 22:56:53] 2025-11-28 21:56:22,498 | INFO     | executing command: cat /etc/os-release
[2025-11-28 22:56:53] 2025-11-28 21:56:22,522 | INFO     | cat /etc/os-release:
[2025-11-28 22:56:53] NAME="CentOS Linux"
[2025-11-28 22:56:53] VERSION="7 (Core)"
[2025-11-28 22:56:53] ID="centos"
[2025-11-28 22:56:53] ID_LIKE="rhel fedora"
[2025-11-28 22:56:53] VERSION_ID="7"
[2025-11-28 22:56:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 22:56:53] ANSI_COLOR="0;31"
[2025-11-28 22:56:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 22:56:53] HOME_URL="https://www.centos.org/"
[2025-11-28 22:56:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 22:56:53] 
[2025-11-28 22:56:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 22:56:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 22:56:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 22:56:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 22:56:53] 
[2025-11-28 22:56:53] 2025-11-28 21:56:22,522 | INFO     | ***************************************
[2025-11-28 22:56:53] 2025-11-28 21:56:23,024 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-28 22:56:53] 2025-11-28 21:56:23,041 | INFO     | sufficient remaining disk space (492000247808 B)
[2025-11-28 22:56:53] 2025-11-28 21:56:23,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 22:56:53] 2025-11-28 21:56:23,042 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 22:56:53] 2025-11-28 21:56:23,042 | INFO     | update_server=False
[2025-11-28 22:56:53] 2025-11-28 21:56:23,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 22:56:53] 2025-11-28 21:56:23,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 22:56:53] 2025-11-28 21:56:23,042 | INFO     | aborting loop
[2025-11-28 22:56:53] 2025-11-28 21:56:23,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 22:56:53] 2025-11-28 21:56:23,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 22:56:53] 2025-11-28 21:56:23,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 22:56:53] 2025-11-28 21:56:23,545 | INFO     | all data control threads have been joined
[2025-11-28 22:56:53] 2025-11-28 21:56:23,627 | INFO     | all payload control threads have been joined
[2025-11-28 22:56:53] 2025-11-28 21:56:24,048 | INFO     | [job] job monitor thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,049 | INFO     | [job] queue monitor thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,049 | INFO     | [job] retrieve thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,297 | INFO     | [job] validate thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,551 | INFO     | [data] control thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,588 | INFO     | [payload] failed_post thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,633 | INFO     | [payload] control thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,698 | INFO     | all job control threads have been joined
[2025-11-28 22:56:53] 2025-11-28 21:56:24,847 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,867 | INFO     | [payload] validate_post thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,893 | INFO     | [data] copytool_in thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,898 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:24,960 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:25,193 | INFO     | [data] copytool_out thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:25,704 | INFO     | [job] control thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:27,051 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 22:56:53] 2025-11-28 21:56:42,225 | INFO     | [monitor] cgroup control has ended
[2025-11-28 22:56:53] 2025-11-28 21:56:44,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199538779968)>', '<ExcThread(monitor, started 140199115867904)>']
[2025-11-28 22:56:53] 2025-11-28 21:56:49,051 | INFO     | all workflow threads have been joined
[2025-11-28 22:56:53] 2025-11-28 21:56:49,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 22:56:53] 2025-11-28 21:56:49,052 | INFO     | traces error code: 0
[2025-11-28 22:56:53] 2025-11-28 21:56:49,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 22:56:53] 2025-11-28 21:56:53,273 | INFO     | PID=3324 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 22:56:53] 2025-11-28 21:56:53,274 | INFO     | .. there are 9 such processes running
[2025-11-28 22:56:53] 2025-11-28 21:56:53,275 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 22:56:53] 2025-11-28 21:56:53,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 22:56:53] 2025-11-28 21:56:53,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 22:56:53] 2025-11-28 21:56:53,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 22:56:53] 2025-11-28 21:56:53,275 | CRITICAL | thread 'MainThread' is not alive
[2025-11-28 22:56:53] 2025-11-28 21:56:53,276 | INFO     | [monitor] control thread has ended
[2025-11-28 22:56:53] 2025-11-28 21:56:53,420 [wrapper] ==== pilot stdout END ====
[2025-11-28 22:56:53] 2025-11-28 21:56:53,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 22:56:53] 2025-11-28 21:56:53,438 [wrapper] pilotpid: 3324
[2025-11-28 22:56:53] 2025-11-28 21:56:53,448 [wrapper] Pilot exit status: 0
[2025-11-28 22:56:53] 2025-11-28 21:56:53,514 [wrapper] pandaids: 6897531739
[2025-11-28 22:56:53] 2025-11-28 21:56:53,611 [wrapper] cleanup supervisor_pilot 20585 3325
[2025-11-28 22:56:53] 2025-11-28 21:56:53,634 [wrapper] Test setup, not cleaning
[2025-11-28 22:56:53] 2025-11-28 21:56:53,645 [wrapper] apfmon messages muted
[2025-11-28 22:56:53] 2025-11-28 21:56:53,649 [wrapper] ==== wrapper stdout END ====
[2025-11-28 22:56:53] 2025-11-28 21:56:53,670 [wrapper] ==== wrapper stderr END ====
[2025-11-28 22:56:53]  *** Error codes and diagnostics ***
[2025-11-28 22:56:53]     "exeErrorCode": 0,
[2025-11-28 22:56:53]     "exeErrorDiag": "",
[2025-11-28 22:56:53]     "pilotErrorCode": 0,
[2025-11-28 22:56:53]     "pilotErrorDiag": "",
[2025-11-28 22:56:53]  *** Listing of results directory ***
[2025-11-28 22:56:53] total 1320028
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-28 22:56:53] -rwx------. 1 boinc boinc     36292 Nov 25 18:01 runpilot2-wrapper.sh
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc      5112 Nov 25 18:02 queuedata.json
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc       100 Nov 28 02:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 22:56:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 02:14 run_atlas
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc       105 Nov 28 02:14 job.xml
[2025-11-28 22:56:53] -rw-r--r--. 2 boinc boinc 410176668 Nov 28 02:14 EVNT.47483658._002310.pool.root.1
[2025-11-28 22:56:53] -rw-r--r--. 2 boinc boinc     15847 Nov 28 02:14 start_atlas.sh
[2025-11-28 22:56:53] drwxrwx--x. 2 boinc boinc        68 Nov 28 02:14 shared
[2025-11-28 22:56:53] -rw-r--r--. 2 boinc boinc    590109 Nov 28 02:14 input.tar.gz
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc      6392 Nov 28 02:14 init_data.xml
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc         0 Nov 28 02:14 boinc_lockfile
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc      2786 Nov 28 02:14 pandaJob.out
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc    991866 Nov 28 02:18 agis_schedconf.cvmfs.json
[2025-11-28 22:56:53] drwx------. 5 boinc boinc      4096 Nov 28 02:18 pilot3
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc       533 Nov 28 22:45 boinc_task_state.xml
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc 913072364 Nov 28 22:55 HITS.47556161._002934.pool.root.1
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc      1032 Nov 28 22:56 memory_monitor_summary.json
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc   1516240 Nov 28 22:56 agis_ddmendpoints.agis.ALL.json
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc   2342725 Nov 28 22:56 log.47556161._002934.job.log.tgz.1
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc      8192 Nov 28 22:56 boinc_mmap_file
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc        29 Nov 28 22:56 wrapper_checkpoint.txt
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc      8627 Nov 28 22:56 heartbeat.json
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc        95 Nov 28 22:56 pilot_heartbeat.json
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc       889 Nov 28 22:56 pilotlog.txt
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc   9935561 Nov 28 22:56 log.47556161._002934.job.log.1
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc       353 Nov 28 22:56 output.list
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc       620 Nov 28 22:56 runtime_log
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc  12298240 Nov 28 22:56 result.tar.gz
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc      8817 Nov 28 22:56 runtime_log.err
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc       661 Nov 28 22:56 EavLDmKbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNcMKDmN7MkYm.diag
[2025-11-28 22:56:53] -rw-r--r--. 1 boinc boinc     20803 Nov 28 22:56 stderr.txt
[2025-11-28 22:56:53] HITS file was successfully produced:
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc 913072364 Nov 28 22:55 shared/HITS.pool.root.1
[2025-11-28 22:56:53]  *** Contents of shared directory: ***
[2025-11-28 22:56:53] total 1304848
[2025-11-28 22:56:53] -rw-r--r--. 2 boinc boinc 410176668 Nov 28 02:14 ATLAS.root_0
[2025-11-28 22:56:53] -rw-r--r--. 2 boinc boinc     15847 Nov 28 02:14 start_atlas.sh
[2025-11-28 22:56:53] -rw-r--r--. 2 boinc boinc    590109 Nov 28 02:14 input.tar.gz
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc 913072364 Nov 28 22:55 HITS.pool.root.1
[2025-11-28 22:56:53] -rw-------. 1 boinc boinc  12298240 Nov 28 22:56 result.tar.gz
22:56:55 (31937): run_atlas exited; CPU time 278927.793511
22:56:55 (31937): called boinc_finish(0)

</stderr_txt>
]]>

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