Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:19:38 (17207): wrapper (7.7.26015): starting
23:19:38 (17207): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:19:38] Arguments: --nthreads 8
[2025-11-25 23:19:38] Threads: 8
[2025-11-25 23:19:38] Checking for CVMFS
[2025-11-25 23:19:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:19:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:19:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:19:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:19:38] 2.11.2.0 4697 117176 133896 153309 2 49 16153819 18432000 1885 130560 0 83731620 99.974 4982909 32192 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 23:19:38] CVMFS is ok
[2025-11-25 23:19:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:19:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:19:38] Further information can be found at the LHC@home message board.
[2025-11-25 23:19:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:19:38] Checking for apptainer binary...
[2025-11-25 23:19:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:19:38] Running /usr/bin/apptainer --version
[2025-11-25 23:19:38] apptainer version 1.3.2-1.el7
[2025-11-25 23:19:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:19:39] c-206-21.aglt2.org
[2025-11-25 23:19:39] apptainer works
[2025-11-25 23:19:39] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:19:39] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:19:39] Starting ATLAS job with PandaID=6897531499
[2025-11-25 23:19:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:40:04 (17207): BOINC client no longer exists - exiting
10:40:04 (17207): timer handler: client dead, exiting
10:49:40 (10890): wrapper (7.7.26015): starting
10:49:40 (10890): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:49:40] Arguments: --nthreads 8
[2025-11-26 10:49:40] Threads: 8
[2025-11-26 10:49:40] This job has been restarted, cleaning up previous attempt
[2025-11-26 10:49:40] Checking for CVMFS
[2025-11-26 10:49:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:49:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:49:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:49:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:49:40] 2.11.2.0 4697 117866 127336 153326 1 57 16323849 18432001 1 130560 0 84423792 99.974 5006516 32206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 10:49:40] CVMFS is ok
[2025-11-26 10:49:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:49:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:49:40] Further information can be found at the LHC@home message board.
[2025-11-26 10:49:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:49:40] Checking for apptainer binary...
[2025-11-26 10:49:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:49:40] Running /usr/bin/apptainer --version
[2025-11-26 10:49:40] apptainer version 1.3.2-1.el7
[2025-11-26 10:49:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:49:42] c-206-21.aglt2.org
[2025-11-26 10:49:42] apptainer works
[2025-11-26 10:49:42] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:49:42] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:49:42] Starting ATLAS job with PandaID=6897531499
[2025-11-26 10:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:28:27 (26403): wrapper (7.7.26015): starting
22:28:27 (26403): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 22:28:27] Arguments: --nthreads 8
[2025-11-26 22:28:27] Threads: 8
[2025-11-26 22:28:27] This job has been restarted, cleaning up previous attempt
[2025-11-26 22:28:27] Checking for CVMFS
[2025-11-26 22:28:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:28:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:28:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:28:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:28:27] 2.11.2.0 4697 118565 130524 153345 3 49 16457462 18432001 1 130560 0 85081077 99.974 5031548 32221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 22:28:27] CVMFS is ok
[2025-11-26 22:28:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:28:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:28:27] Further information can be found at the LHC@home message board.
[2025-11-26 22:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:28:27] Checking for apptainer binary...
[2025-11-26 22:28:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:28:27] Running /usr/bin/apptainer --version
[2025-11-26 22:28:27] apptainer version 1.3.2-1.el7
[2025-11-26 22:28:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:28:28] c-206-21.aglt2.org
[2025-11-26 22:28:28] apptainer works
[2025-11-26 22:28:28] Set ATHENA_PROC_NUMBER=8
[2025-11-26 22:28:28] Set ATHENA_CORE_NUMBER=8
[2025-11-26 22:28:28] Starting ATLAS job with PandaID=6897531499
[2025-11-26 22:28:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:07:53]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:07:53] 2025-11-27 23:07:19,690 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 18:07:53] 2025-11-27 23:07:19,694 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2172.875
[2025-11-27 18:07:53] 2025-11-27 23:07:19,696 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897531499/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,696 | INFO     | extracted standard info from prmon json
[2025-11-27 18:07:53] 2025-11-27 23:07:19,697 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:07:53] 2025-11-27 23:07:19,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:07:53] 2025-11-27 23:07:19,711 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:07:53] 2025-11-27 23:07:19,712 | INFO     | sum of square deviations: 482756445948.3616
[2025-11-27 18:07:53] 2025-11-27 23:07:19,735 | INFO     | sum of deviations: 2356238446290.443
[2025-11-27 18:07:53] 2025-11-27 23:07:19,736 | INFO     | mean x: 1764249467.7868853
[2025-11-27 18:07:53] 2025-11-27 23:07:19,736 | INFO     | mean y: 2871151.2528041415
[2025-11-27 18:07:53] 2025-11-27 23:07:19,736 | INFO     | intersect: -8608080519.585306
[2025-11-27 18:07:53] 2025-11-27 23:07:19,737 | INFO     | chi2: 4.67123993809361
[2025-11-27 18:07:53] 2025-11-27 23:07:19,738 | INFO     | sum of square deviations: 476535705137.7511
[2025-11-27 18:07:53] 2025-11-27 23:07:19,761 | INFO     | sum of deviations: 2650993563111.0747
[2025-11-27 18:07:53] 2025-11-27 23:07:19,761 | INFO     | mean x: 1764249315.2902946
[2025-11-27 18:07:53] 2025-11-27 23:07:19,761 | INFO     | mean y: 2878371.363951473
[2025-11-27 18:07:53] 2025-11-27 23:07:19,761 | INFO     | intersect: -9811734737.64898
[2025-11-27 18:07:53] 2025-11-27 23:07:19,762 | INFO     | chi2: 2.624196858373873
[2025-11-27 18:07:53] 2025-11-27 23:07:19,762 | INFO     | current chi2=2.624196858373873 (change=43.82226361412641 %)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,763 | INFO     | sum of square deviations: 470368639752.1165
[2025-11-27 18:07:53] 2025-11-27 23:07:19,786 | INFO     | sum of deviations: 2749422191098.781
[2025-11-27 18:07:53] 2025-11-27 23:07:19,786 | INFO     | mean x: 1764249162.7937336
[2025-11-27 18:07:53] 2025-11-27 23:07:19,786 | INFO     | mean y: 2880803.914708442
[2025-11-27 18:07:53] 2025-11-27 23:07:19,786 | INFO     | intersect: -10309596238.281023
[2025-11-27 18:07:53] 2025-11-27 23:07:19,787 | INFO     | chi2: 2.311778668728827
[2025-11-27 18:07:53] 2025-11-27 23:07:19,787 | INFO     | current chi2=2.311778668728827 (change=11.905287846379068 %)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,788 | INFO     | right removable region: 1148
[2025-11-27 18:07:53] 2025-11-27 23:07:19,789 | INFO     | sum of square deviations: 476535148817.7508
[2025-11-27 18:07:53] 2025-11-27 23:07:19,812 | INFO     | sum of deviations: 2072756439607.2874
[2025-11-27 18:07:53] 2025-11-27 23:07:19,812 | INFO     | mean x: 1764249620.2902946
[2025-11-27 18:07:53] 2025-11-27 23:07:19,812 | INFO     | mean y: 2878091.052859619
[2025-11-27 18:07:53] 2025-11-27 23:07:19,812 | INFO     | intersect: -7670972978.703115
[2025-11-27 18:07:53] 2025-11-27 23:07:19,813 | INFO     | chi2: 2.7175774002569693
[2025-11-27 18:07:53] 2025-11-27 23:07:19,813 | INFO     | current chi2=2.7175774002569693 (change=41.82321104734248 %)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,814 | INFO     | sum of square deviations: 470367738173.8697
[2025-11-27 18:07:53] 2025-11-27 23:07:19,837 | INFO     | sum of deviations: 1979984764697.004
[2025-11-27 18:07:53] 2025-11-27 23:07:19,837 | INFO     | mean x: 1764249772.7911227
[2025-11-27 18:07:53] 2025-11-27 23:07:19,837 | INFO     | mean y: 2880384.6083550914
[2025-11-27 18:07:53] 2025-11-27 23:07:19,837 | INFO     | intersect: -7423623152.407887
[2025-11-27 18:07:53] 2025-11-27 23:07:19,838 | INFO     | chi2: 2.626991754363286
[2025-11-27 18:07:53] 2025-11-27 23:07:19,838 | INFO     | current chi2=2.626991754363286 (change=3.333323491912971 %)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,838 | INFO     | left removable region: 20
[2025-11-27 18:07:53] 2025-11-27 23:07:19,839 | INFO     | sum of square deviations: 445046253681.1194
[2025-11-27 18:07:53] 2025-11-27 23:07:19,861 | INFO     | sum of deviations: 2236629843512.544
[2025-11-27 18:07:53] 2025-11-27 23:07:19,861 | INFO     | mean x: 1764249742.3005319
[2025-11-27 18:07:53] 2025-11-27 23:07:19,861 | INFO     | mean y: 2893780.92464539
[2025-11-27 18:07:53] 2025-11-27 23:07:19,862 | INFO     | intersect: -8863541095.0018
[2025-11-27 18:07:53] 2025-11-27 23:07:19,863 | INFO     | chi2: 0.18903575366732284
[2025-11-27 18:07:53] 2025-11-27 23:07:19,863 | INFO     | current memory leak: 5.03 B/s (using 1128 data points, chi2=0.19)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,863 | INFO     | could have reported an average CPU frequency of 2579 MHz (42 samples)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | ..............................
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . Timing measurements:
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . get job = 0 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . initial setup = 2 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . payload setup = 6 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . stage-in = 0 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . payload execution = 70685 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . stage-out = 3 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | . log creation = 0 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,864 | INFO     | ..............................
[2025-11-27 18:07:53] 2025-11-27 23:07:19,939 | INFO     | 
[2025-11-27 18:07:53] 2025-11-27 23:07:19,940 | INFO     | job summary report
[2025-11-27 18:07:53] 2025-11-27 23:07:19,940 | INFO     | --------------------------------------------------
[2025-11-27 18:07:53] 2025-11-27 23:07:19,940 | INFO     | PanDA job id: 6897531499
[2025-11-27 18:07:53] 2025-11-27 23:07:19,940 | INFO     | task id: 47556161
[2025-11-27 18:07:53] 2025-11-27 23:07:19,940 | INFO     | errors: (none)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,940 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:07:53] 2025-11-27 23:07:19,941 | INFO     | pilot state: finished 
[2025-11-27 18:07:53] 2025-11-27 23:07:19,941 | INFO     | transexitcode: 0
[2025-11-27 18:07:53] 2025-11-27 23:07:19,941 | INFO     | exeerrorcode: 0
[2025-11-27 18:07:53] 2025-11-27 23:07:19,941 | INFO     | exeerrordiag: 
[2025-11-27 18:07:53] 2025-11-27 23:07:19,941 | INFO     | exitcode: 0
[2025-11-27 18:07:53] 2025-11-27 23:07:19,941 | INFO     | exitmsg: OK
[2025-11-27 18:07:53] 2025-11-27 23:07:19,942 | INFO     | cpuconsumptiontime: 546467 s
[2025-11-27 18:07:53] 2025-11-27 23:07:19,942 | INFO     | nevents: 1000
[2025-11-27 18:07:53] 2025-11-27 23:07:19,942 | INFO     | neventsw: 0
[2025-11-27 18:07:53] 2025-11-27 23:07:19,942 | INFO     | pid: 26501
[2025-11-27 18:07:53] 2025-11-27 23:07:19,942 | INFO     | pgrp: 26501
[2025-11-27 18:07:53] 2025-11-27 23:07:19,942 | INFO     | corecount: 8
[2025-11-27 18:07:53] 2025-11-27 23:07:19,943 | INFO     | event service: False
[2025-11-27 18:07:53] 2025-11-27 23:07:19,943 | INFO     | sizes: {0: 2284094, 1: 2284293, 5: 2284555, 11: 2284611, 70695: 2341325, 70698: 2350319, 70699: 2350503, 70702: 2350749}
[2025-11-27 18:07:53] 2025-11-27 23:07:19,943 | INFO     | --------------------------------------------------
[2025-11-27 18:07:53] 2025-11-27 23:07:19,943 | INFO     | 
[2025-11-27 18:07:53] 2025-11-27 23:07:19,943 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 18:07:53] 2025-11-27 23:07:19,957 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,958 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:07:53] 2025-11-27 23:07:19,961 | INFO     | job 6897531499 has completed (purged errors)
[2025-11-27 18:07:53] 2025-11-27 23:07:19,961 | INFO     | overall cleanup function is called
[2025-11-27 18:07:53] 2025-11-27 23:07:20,977 | INFO     | --- collectZombieJob: --- 10, [26501]
[2025-11-27 18:07:53] 2025-11-27 23:07:20,977 | INFO     | zombie collector waiting for pid 26501
[2025-11-27 18:07:53] 2025-11-27 23:07:20,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:07:53] 2025-11-27 23:07:20,978 | INFO     | collected zombie processes
[2025-11-27 18:07:53] 2025-11-27 23:07:20,978 | INFO     | will attempt to kill all subprocesses of pid=26501
[2025-11-27 18:07:53] 2025-11-27 23:07:21,094 | INFO     | process IDs to be killed: [26501] (in reverse order)
[2025-11-27 18:07:53] 2025-11-27 23:07:21,137 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:07:53] 2025-11-27 23:07:21,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:07:53] 2025-11-27 23:07:21,140 | INFO     | did not find any defunct processes belonging to 26501
[2025-11-27 18:07:53] 2025-11-27 23:07:21,142 | INFO     | did not find any defunct processes belonging to 26501
[2025-11-27 18:07:53] 2025-11-27 23:07:21,144 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:07:53] 2025-11-27 23:07:21,144 | INFO     | ready for new job
[2025-11-27 18:07:53] 2025-11-27 23:07:21,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:07:53] 2025-11-27 23:07:21,148 | INFO     | ***************************************
[2025-11-27 18:07:53] 2025-11-27 23:07:21,148 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:07:53] 2025-11-27 23:07:21,148 | INFO     | ***************************************
[2025-11-27 18:07:53] 2025-11-27 23:07:21,148 | INFO     | 
[2025-11-27 18:07:53] 2025-11-27 23:07:21,149 | INFO     | architecture information:
[2025-11-27 18:07:53] 2025-11-27 23:07:21,149 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:07:53] 2025-11-27 23:07:21,161 | INFO     | cat /etc/os-release:
[2025-11-27 18:07:53] NAME="CentOS Linux"
[2025-11-27 18:07:53] VERSION="7 (Core)"
[2025-11-27 18:07:53] ID="centos"
[2025-11-27 18:07:53] ID_LIKE="rhel fedora"
[2025-11-27 18:07:53] VERSION_ID="7"
[2025-11-27 18:07:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:07:53] ANSI_COLOR="0;31"
[2025-11-27 18:07:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:07:53] HOME_URL="https://www.centos.org/"
[2025-11-27 18:07:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:07:53] 
[2025-11-27 18:07:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:07:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:07:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:07:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:07:53] 
[2025-11-27 18:07:53] 2025-11-27 23:07:21,161 | INFO     | ***************************************
[2025-11-27 18:07:53] 2025-11-27 23:07:21,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 18:07:53] 2025-11-27 23:07:21,678 | INFO     | sufficient remaining disk space (25562185728 B)
[2025-11-27 18:07:53] 2025-11-27 23:07:21,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:07:53] 2025-11-27 23:07:21,679 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:07:53] 2025-11-27 23:07:21,679 | INFO     | update_server=False
[2025-11-27 18:07:53] 2025-11-27 23:07:21,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:07:53] 2025-11-27 23:07:21,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:07:53] 2025-11-27 23:07:21,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:07:53] 2025-11-27 23:07:21,919 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 18:07:53] 2025-11-27 23:07:21,919 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 18:07:53] 2025-11-27 23:07:21,919 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:07:53] 2025-11-27 23:07:21,919 | INFO     | will abort loop
[2025-11-27 18:07:53] 2025-11-27 23:07:22,407 | INFO     | all data control threads have been joined
[2025-11-27 18:07:53] 2025-11-27 23:07:22,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:07:53] 2025-11-27 23:07:22,684 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:22,685 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:22,696 | INFO     | all payload control threads have been joined
[2025-11-27 18:07:53] 2025-11-27 23:07:22,883 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:22,901 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:22,927 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:22,978 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:23,065 | INFO     | all job control threads have been joined
[2025-11-27 18:07:53] 2025-11-27 23:07:23,266 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:23,410 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:23,412 | INFO     | [data] control thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:23,682 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:23,701 | INFO     | [payload] control thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:23,874 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:24,071 | INFO     | [job] control thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:24,129 | INFO     | [job] validate thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:26,452 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:32,501 | INFO     | job.realtimelogging is not enabled
[2025-11-27 18:07:53] 2025-11-27 23:07:33,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:07:53] 2025-11-27 23:07:38,433 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:07:53] 2025-11-27 23:07:38,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729009252160)>', '<ExcThread(monitor, started 139728305256192)>']
[2025-11-27 18:07:53] 2025-11-27 23:07:43,647 | INFO     | all workflow threads have been joined
[2025-11-27 18:07:53] 2025-11-27 23:07:43,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:07:53] 2025-11-27 23:07:43,648 | INFO     | traces error code: 0
[2025-11-27 18:07:53] 2025-11-27 23:07:43,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:07:53] 2025-11-27 23:07:52,773 | INFO     | PID=5537 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 18:07:53] 2025-11-27 23:07:52,773 | INFO     | .. there are 3 such processes running
[2025-11-27 18:07:53] 2025-11-27 23:07:52,774 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:07:53] 2025-11-27 23:07:52,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:07:53] 2025-11-27 23:07:52,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:07:53] 2025-11-27 23:07:52,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:07:53] 2025-11-27 23:07:52,774 | INFO     | [monitor] control thread has ended
[2025-11-27 18:07:53] 2025-11-27 23:07:52,874 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:07:53] 2025-11-27 23:07:52,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:07:53] 2025-11-27 23:07:52,879 [wrapper] pilotpid: 5537
[2025-11-27 18:07:53] 2025-11-27 23:07:52,881 [wrapper] Pilot exit status: 0
[2025-11-27 18:07:53] 2025-11-27 23:07:52,889 [wrapper] pandaids: 6897531499 6897531499 6897531499
[2025-11-27 18:07:53] 2025-11-27 23:07:52,919 [wrapper] cleanup supervisor_pilot 19996 5538
[2025-11-27 18:07:53] 2025-11-27 23:07:52,921 [wrapper] Test setup, not cleaning
[2025-11-27 18:07:53] 2025-11-27 23:07:52,923 [wrapper] apfmon messages muted
[2025-11-27 18:07:53] 2025-11-27 23:07:52,926 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:07:53] 2025-11-27 23:07:52,928 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:07:53]  *** Error codes and diagnostics ***
[2025-11-27 18:07:53]     "exeErrorCode": 0,
[2025-11-27 18:07:53]     "exeErrorDiag": "",
[2025-11-27 18:07:53]     "pilotErrorCode": 0,
[2025-11-27 18:07:53]     "pilotErrorDiag": "",
[2025-11-27 18:07:53]  *** Listing of results directory ***
[2025-11-27 18:07:53] total 1714424
[2025-11-27 18:07:53] drwx------ 7 boincer umatlas      4096 Nov  5 04:49 pilot3
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-27 18:07:53] -rwx------ 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas       100 Nov 25 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:07:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 23:19 run_atlas
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas       105 Nov 25 23:19 job.xml
[2025-11-27 18:07:53] -rw-r--r-- 3 boincer umatlas 408692112 Nov 25 23:19 EVNT.47483658._002298.pool.root.1
[2025-11-27 18:07:53] -rw-r--r-- 3 boincer umatlas 408692112 Nov 25 23:19 ATLAS.root_0
[2025-11-27 18:07:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 23:19 start_atlas.sh
[2025-11-27 18:07:53] drwxrwx--x 2 boincer umatlas      4096 Nov 25 23:19 shared
[2025-11-27 18:07:53] -rw-r--r-- 2 boincer umatlas    611289 Nov 25 23:19 input.tar.gz
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas         0 Nov 25 23:19 boinc_lockfile
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 22:28 pandaJob.out
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas        57 Nov 26 22:28 setup.sh.local
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas    991546 Nov 26 22:28 agis_schedconf.cvmfs.json
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas       535 Nov 27 17:56 boinc_task_state.xml
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 18:00 init_data.xml
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas 910024390 Nov 27 18:06 HITS.47556161._002812.pool.root.1
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas        96 Nov 27 18:07 pilot_heartbeat.json
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas      1063 Nov 27 18:07 memory_monitor_summary.json
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas   1516240 Nov 27 18:07 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas   2316032 Nov 27 18:07 log.47556161._002812.job.log.tgz.1
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas      8678 Nov 27 18:07 heartbeat.json
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas        31 Nov 27 18:07 wrapper_checkpoint.txt
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 18:07 boinc_mmap_file
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas       819 Nov 27 18:07 pilotlog.txt
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas   9776141 Nov 27 18:07 log.47556161._002812.job.log.1
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas       353 Nov 27 18:07 output.list
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas       620 Nov 27 18:07 runtime_log
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas  12113920 Nov 27 18:07 result.tar.gz
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas      9428 Nov 27 18:07 runtime_log.err
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas       918 Nov 27 18:07 emVMDmJbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9gJKDmy2cKyn.diag
[2025-11-27 18:07:53] -rw-r--r-- 1 boincer umatlas     25650 Nov 27 18:07 stderr.txt
[2025-11-27 18:07:53] HITS file was successfully produced:
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas 910024390 Nov 27 18:06 shared/HITS.pool.root.1
[2025-11-27 18:07:53]  *** Contents of shared directory: ***
[2025-11-27 18:07:53] total 1300268
[2025-11-27 18:07:53] -rw-r--r-- 3 boincer umatlas 408692112 Nov 25 23:19 ATLAS.root_0
[2025-11-27 18:07:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 23:19 start_atlas.sh
[2025-11-27 18:07:53] -rw-r--r-- 2 boincer umatlas    611289 Nov 25 23:19 input.tar.gz
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas 910024390 Nov 27 18:06 HITS.pool.root.1
[2025-11-27 18:07:53] -rw------- 1 boincer umatlas  12113920 Nov 27 18:07 result.tar.gz
18:07:54 (26403): run_atlas exited; CPU time 545310.905333
18:07:54 (26403): called boinc_finish(0)

</stderr_txt>
]]>

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