Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:52:54 (4067529): wrapper (7.7.26015): starting
22:52:54 (4067529): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:52:54] Arguments: --nthreads 8
[2025-11-25 22:52:54] Threads: 8
[2025-11-25 22:52:54] Checking for CVMFS
[2025-11-25 22:52:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:52:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:52:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:52:56] 2.13.3.0 7030 4853 234852 153307 3 473 22480215 32935936 59121 16776704 0 39267985 99.720 30326144 32551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:52:56] CVMFS is ok
[2025-11-25 22:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:52:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:52:56] Further information can be found at the LHC@home message board.
[2025-11-25 22:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:52:56] Checking for apptainer binary...
[2025-11-25 22:52:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:52:56] Running /usr/bin/apptainer --version
[2025-11-25 22:52:56] apptainer version 1.4.4-1.el9
[2025-11-25 22:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:52:56] lc-10-10.aglt2.org
[2025-11-25 22:52:56] apptainer works
[2025-11-25 22:52:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:52:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:52:57] Starting ATLAS job with PandaID=6897510062
[2025-11-25 22:52:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:06:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:06:48] 2025-11-27 02:06:12,903 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:06:48] 2025-11-27 02:06:12,903 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:06:48] 2025-11-27 02:06:12,924 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:06:48] 2025-11-27 02:06:12,926 | INFO     | sum of square deviations: 693898692484.8887
[2025-11-26 21:06:48] 2025-11-27 02:06:12,989 | INFO     | sum of deviations: 2940825537839.6694
[2025-11-26 21:06:48] 2025-11-27 02:06:12,989 | INFO     | mean x: 1764169237.5091743
[2025-11-26 21:06:48] 2025-11-27 02:06:12,989 | INFO     | mean y: 2879483.4029051987
[2025-11-26 21:06:48] 2025-11-27 02:06:12,989 | INFO     | intersect: -7473880457.09965
[2025-11-26 21:06:48] 2025-11-27 02:06:12,991 | INFO     | chi2: 11.791414800698764
[2025-11-26 21:06:48] 2025-11-27 02:06:12,998 | INFO     | sum of square deviations: 685972219789.6283
[2025-11-26 21:06:48] 2025-11-27 02:06:13,067 | INFO     | sum of deviations: 3387634493149.46
[2025-11-26 21:06:48] 2025-11-27 02:06:13,067 | INFO     | mean x: 1764169085.016884
[2025-11-26 21:06:48] 2025-11-27 02:06:13,067 | INFO     | mean y: 2888078.024558711
[2025-11-26 21:06:48] 2025-11-27 02:06:13,067 | INFO     | intersect: -8709359840.679684
[2025-11-26 21:06:48] 2025-11-27 02:06:13,073 | INFO     | chi2: 8.546799275640716
[2025-11-26 21:06:48] 2025-11-27 02:06:13,073 | INFO     | current chi2=8.546799275640716 (change=27.516761812719633 %)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,075 | INFO     | sum of square deviations: 678106352881.7129
[2025-11-26 21:06:48] 2025-11-27 02:06:13,252 | INFO     | sum of deviations: 3790417657917.438
[2025-11-26 21:06:48] 2025-11-27 02:06:13,253 | INFO     | mean x: 1764168932.5246532
[2025-11-26 21:06:48] 2025-11-27 02:06:13,254 | INFO     | mean y: 2895881.2519260403
[2025-11-26 21:06:48] 2025-11-27 02:06:13,254 | INFO     | intersect: -9858296312.234653
[2025-11-26 21:06:48] 2025-11-27 02:06:13,255 | INFO     | chi2: 5.6326893386968475
[2025-11-26 21:06:48] 2025-11-27 02:06:13,256 | INFO     | current chi2=5.6326893386968475 (change=34.095921092348455 %)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,261 | INFO     | sum of square deviations: 670300780267.6996
[2025-11-26 21:06:48] 2025-11-27 02:06:13,333 | INFO     | sum of deviations: 3956016654531.5664
[2025-11-26 21:06:48] 2025-11-27 02:06:13,333 | INFO     | mean x: 1764168780.0317092
[2025-11-26 21:06:48] 2025-11-27 02:06:13,333 | INFO     | mean y: 2899114.3031709203
[2025-11-26 21:06:48] 2025-11-27 02:06:13,334 | INFO     | intersect: -10408965649.486637
[2025-11-26 21:06:48] 2025-11-27 02:06:13,339 | INFO     | chi2: 5.028226988001774
[2025-11-26 21:06:48] 2025-11-27 02:06:13,340 | INFO     | current chi2=5.028226988001774 (change=10.731327689996823 %)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,340 | INFO     | right removable region: 1292
[2025-11-26 21:06:48] 2025-11-27 02:06:13,341 | INFO     | sum of square deviations: 685970616709.6289
[2025-11-26 21:06:48] 2025-11-27 02:06:13,414 | INFO     | sum of deviations: 2427449514878.314
[2025-11-26 21:06:48] 2025-11-27 02:06:13,415 | INFO     | mean x: 1764169390.016884
[2025-11-26 21:06:48] 2025-11-27 02:06:13,415 | INFO     | mean y: 2889357.4858019953
[2025-11-26 21:06:48] 2025-11-27 02:06:13,415 | INFO     | intersect: -6239990476.78618
[2025-11-26 21:06:48] 2025-11-27 02:06:13,417 | INFO     | chi2: 7.8451060946984175
[2025-11-26 21:06:48] 2025-11-27 02:06:13,417 | INFO     | current chi2=7.8451060946984175 (change=33.46764381290773 %)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,423 | INFO     | sum of square deviations: 678103305571.806
[2025-11-26 21:06:48] 2025-11-27 02:06:13,484 | INFO     | sum of deviations: 2225512486852.034
[2025-11-26 21:06:48] 2025-11-27 02:06:13,488 | INFO     | mean x: 1764169542.5231125
[2025-11-26 21:06:48] 2025-11-27 02:06:13,489 | INFO     | mean y: 2893267.6155624036
[2025-11-26 21:06:48] 2025-11-27 02:06:13,489 | INFO     | intersect: -5787052473.024209
[2025-11-26 21:06:48] 2025-11-27 02:06:13,494 | INFO     | chi2: 7.134251731129716
[2025-11-26 21:06:48] 2025-11-27 02:06:13,495 | INFO     | current chi2=7.134251731129716 (change=9.06111854942388 %)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,495 | INFO     | left removable region: 20
[2025-11-26 21:06:48] 2025-11-27 02:06:13,496 | INFO     | sum of square deviations: 638166421186.2574
[2025-11-26 21:06:48] 2025-11-27 02:06:13,569 | INFO     | sum of deviations: 3094326326247.009
[2025-11-26 21:06:48] 2025-11-27 02:06:13,569 | INFO     | mean x: 1764169359.5542452
[2025-11-26 21:06:48] 2025-11-27 02:06:13,569 | INFO     | mean y: 2916667.072327044
[2025-11-26 21:06:48] 2025-11-27 02:06:13,570 | INFO     | intersect: -8551146210.569692
[2025-11-26 21:06:48] 2025-11-27 02:06:13,571 | INFO     | chi2: 0.1992798576917001
[2025-11-26 21:06:48] 2025-11-27 02:06:13,576 | INFO     | current memory leak: 4.85 B/s (using 1272 data points, chi2=0.20)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,578 | INFO     | could have reported an average CPU frequency of 2729 MHz (47 samples)
[2025-11-26 21:06:48] 2025-11-27 02:06:13,578 | INFO     | ..............................
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . Timing measurements:
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . get job = 0 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . initial setup = 4 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . payload setup = 40 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . stage-in = 0 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . payload execution = 79785 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . stage-out = 8 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | . log creation = 2 s
[2025-11-26 21:06:48] 2025-11-27 02:06:13,579 | INFO     | ..............................
[2025-11-26 21:06:48] 2025-11-27 02:06:14,050 | INFO     | 
[2025-11-26 21:06:48] 2025-11-27 02:06:14,050 | INFO     | job summary report
[2025-11-26 21:06:48] 2025-11-27 02:06:14,050 | INFO     | --------------------------------------------------
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | PanDA job id: 6897510062
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | task id: 47556161
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | errors: (none)
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | pilot state: finished 
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | transexitcode: 0
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | exeerrorcode: 0
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | exeerrordiag: 
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | exitcode: 0
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | exitmsg: OK
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | cpuconsumptiontime: 264704 s
[2025-11-26 21:06:48] 2025-11-27 02:06:14,051 | INFO     | nevents: 1000
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | neventsw: 0
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | pid: 4093246
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | pgrp: 4093246
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | corecount: 8
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | event service: False
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | sizes: {0: 2284094, 1: 2284122, 2: 2284293, 12: 2284321, 23: 2284349, 30: 2284639, 34: 2284795, 79830: 2345233, 79840: 2354283, 79870: 2354473}
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | --------------------------------------------------
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | 
[2025-11-26 21:06:48] 2025-11-27 02:06:14,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 21:06:48] 2025-11-27 02:06:14,172 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,172 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:06:48] 2025-11-27 02:06:14,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:06:48] 2025-11-27 02:06:14,175 | INFO     | job 6897510062 has completed (purged errors)
[2025-11-26 21:06:48] 2025-11-27 02:06:14,178 | INFO     | overall cleanup function is called
[2025-11-26 21:06:48] 2025-11-27 02:06:15,209 | INFO     | --- collectZombieJob: --- 10, [4093246]
[2025-11-26 21:06:48] 2025-11-27 02:06:15,209 | INFO     | zombie collector waiting for pid 4093246
[2025-11-26 21:06:48] 2025-11-27 02:06:15,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:06:48] 2025-11-27 02:06:15,210 | INFO     | collected zombie processes
[2025-11-26 21:06:48] 2025-11-27 02:06:15,210 | INFO     | will attempt to kill all subprocesses of pid=4093246
[2025-11-26 21:06:48] 2025-11-27 02:06:16,649 | INFO     | process IDs to be killed: [4093246] (in reverse order)
[2025-11-26 21:06:48] 2025-11-27 02:06:17,135 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:06:48] 2025-11-27 02:06:17,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:06:48] 2025-11-27 02:06:17,218 | INFO     | did not find any defunct processes belonging to 4093246
[2025-11-26 21:06:48] 2025-11-27 02:06:17,251 | INFO     | did not find any defunct processes belonging to 4093246
[2025-11-26 21:06:48] 2025-11-27 02:06:17,252 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:06:48] 2025-11-27 02:06:17,252 | INFO     | ready for new job
[2025-11-26 21:06:48] 2025-11-27 02:06:17,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:06:48] 2025-11-27 02:06:17,259 | INFO     | ***************************************
[2025-11-26 21:06:48] 2025-11-27 02:06:17,259 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:06:48] 2025-11-27 02:06:17,259 | INFO     | ***************************************
[2025-11-26 21:06:48] 2025-11-27 02:06:17,259 | INFO     | 
[2025-11-26 21:06:48] 2025-11-27 02:06:17,264 | INFO     | architecture information:
[2025-11-26 21:06:48] 2025-11-27 02:06:17,268 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:06:48] 2025-11-27 02:06:17,343 | INFO     | cat /etc/os-release:
[2025-11-26 21:06:48] NAME="CentOS Linux"
[2025-11-26 21:06:48] VERSION="7 (Core)"
[2025-11-26 21:06:48] ID="centos"
[2025-11-26 21:06:48] ID_LIKE="rhel fedora"
[2025-11-26 21:06:48] VERSION_ID="7"
[2025-11-26 21:06:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:06:48] ANSI_COLOR="0;31"
[2025-11-26 21:06:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:06:48] HOME_URL="https://www.centos.org/"
[2025-11-26 21:06:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:06:48] 
[2025-11-26 21:06:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:06:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:06:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:06:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:06:48] 
[2025-11-26 21:06:48] 2025-11-27 02:06:17,349 | INFO     | ***************************************
[2025-11-26 21:06:48] 2025-11-27 02:06:17,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 21:06:48] 2025-11-27 02:06:17,929 | INFO     | sufficient remaining disk space (86688923648 B)
[2025-11-26 21:06:48] 2025-11-27 02:06:17,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:06:48] 2025-11-27 02:06:17,929 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:06:48] 2025-11-27 02:06:17,930 | INFO     | update_server=False
[2025-11-26 21:06:48] 2025-11-27 02:06:17,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:06:48] 2025-11-27 02:06:18,213 | INFO     | all payload control threads have been joined
[2025-11-26 21:06:48] 2025-11-27 02:06:18,340 | INFO     | all job control threads have been joined
[2025-11-26 21:06:48] 2025-11-27 02:06:18,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:06:48] 2025-11-27 02:06:18,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:06:48] 2025-11-27 02:06:18,821 | INFO     | aborting loop
[2025-11-26 21:06:48] 2025-11-27 02:06:18,935 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:18,993 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,023 | INFO     | all data control threads have been joined
[2025-11-26 21:06:48] 2025-11-27 02:06:19,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:06:48] 2025-11-27 02:06:19,218 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,219 | INFO     | [payload] control thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,348 | INFO     | [job] control thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,724 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,750 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,779 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,826 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,947 | INFO     | [job] validate thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:19,999 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:20,029 | INFO     | [data] control thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:20,305 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:21,215 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:21,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:06:48] 2025-11-27 02:06:25,187 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:06:48] 2025-11-27 02:06:25,477 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:06:48] 2025-11-27 02:06:27,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477404436288)>', '<ExcThread(monitor, started 140476753630976)>']
[2025-11-26 21:06:48] 2025-11-27 02:06:32,585 | INFO     | all workflow threads have been joined
[2025-11-26 21:06:48] 2025-11-27 02:06:32,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:06:48] 2025-11-27 02:06:32,590 | INFO     | traces error code: 0
[2025-11-26 21:06:48] 2025-11-27 02:06:32,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:06:48] 2025-11-27 02:06:47,126 | INFO     | PID=4073474 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:06:48] 2025-11-27 02:06:47,126 | INFO     | .. there are 96 such processes running
[2025-11-26 21:06:48] 2025-11-27 02:06:47,126 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:06:48] 2025-11-27 02:06:47,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:06:48] 2025-11-27 02:06:47,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:06:48] 2025-11-27 02:06:47,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:06:48] 2025-11-27 02:06:47,127 | INFO     | [monitor] control thread has ended
[2025-11-26 21:06:48] 2025-11-27 02:06:47,419 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:06:48] 2025-11-27 02:06:47,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:06:48] 2025-11-27 02:06:47,444 [wrapper] pilotpid: 4073474
[2025-11-26 21:06:48] 2025-11-27 02:06:47,447 [wrapper] Pilot exit status: 0
[2025-11-26 21:06:48] 2025-11-27 02:06:47,567 [wrapper] pandaids: 6897510062
[2025-11-26 21:06:48] 2025-11-27 02:06:47,861 [wrapper] cleanup supervisor_pilot 1064048 4073475
[2025-11-26 21:06:48] 2025-11-27 02:06:47,882 [wrapper] Test setup, not cleaning
[2025-11-26 21:06:48] 2025-11-27 02:06:47,899 [wrapper] apfmon messages muted
[2025-11-26 21:06:48] 2025-11-27 02:06:47,926 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:06:48] 2025-11-27 02:06:47,929 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:06:48]  *** Error codes and diagnostics ***
[2025-11-26 21:06:48]     "exeErrorCode": 0,
[2025-11-26 21:06:48]     "exeErrorDiag": "",
[2025-11-26 21:06:48]     "pilotErrorCode": 0,
[2025-11-26 21:06:48]     "pilotErrorDiag": "",
[2025-11-26 21:06:48]  *** Listing of results directory ***
[2025-11-26 21:06:48] total 1309236
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 21:06:48] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:06:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:52 run_atlas
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:52 job.xml
[2025-11-26 21:06:48] -rw-r--r--. 2 boincer umatlas 409785660 Nov 25 22:52 EVNT.47483658._002291.pool.root.1
[2025-11-26 21:06:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:52 start_atlas.sh
[2025-11-26 21:06:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:52 shared
[2025-11-26 21:06:48] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 22:52 input.tar.gz
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:52 boinc_lockfile
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:52 pandaJob.out
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas        57 Nov 25 22:52 setup.sh.local
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas    991877 Nov 25 22:53 agis_schedconf.cvmfs.json
[2025-11-26 21:06:48] drwx------. 5 boincer umatlas      4096 Nov 25 22:53 pilot3
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:47 boinc_task_state.xml
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas      6885 Nov 26 21:01 init_data.xml
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas 904136594 Nov 26 21:04 HITS.47556161._002745.pool.root.1
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas      1060 Nov 26 21:05 memory_monitor_summary.json
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:05 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas   2292302 Nov 26 21:05 log.47556161._002745.job.log.tgz.1
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas        95 Nov 26 21:06 pilot_heartbeat.json
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas      8620 Nov 26 21:06 heartbeat.json
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas       823 Nov 26 21:06 pilotlog.txt
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:06 wrapper_checkpoint.txt
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:06 boinc_mmap_file
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas   9115176 Nov 26 21:06 log.47556161._002745.job.log.1
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas       353 Nov 26 21:06 output.list
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:06 runtime_log
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas  11427840 Nov 26 21:06 result.tar.gz
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 21:06 runtime_log.err
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas       660 Nov 26 21:06 euzKDmJbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBgJKDmDIuI2n.diag
[2025-11-26 21:06:48] -rw-r--r--. 1 boincer umatlas     21146 Nov 26 21:06 stderr.txt
[2025-11-26 21:06:48] HITS file was successfully produced:
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas 904136594 Nov 26 21:04 shared/HITS.pool.root.1
[2025-11-26 21:06:48]  *** Contents of shared directory: ***
[2025-11-26 21:06:48] total 1294896
[2025-11-26 21:06:48] -rw-r--r--. 2 boincer umatlas 409785660 Nov 25 22:52 ATLAS.root_0
[2025-11-26 21:06:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:52 start_atlas.sh
[2025-11-26 21:06:48] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 22:52 input.tar.gz
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas 904136594 Nov 26 21:04 HITS.pool.root.1
[2025-11-26 21:06:48] -rw-------. 1 boincer umatlas  11427840 Nov 26 21:06 result.tar.gz
21:06:49 (4067529): run_atlas exited; CPU time 269583.456290
21:06:49 (4067529): called boinc_finish(0)

</stderr_txt>
]]>

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