Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:13 (1039732): wrapper (7.7.26015): starting
00:04:13 (1039732): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:04:13] Arguments: --nthreads 8
[2025-11-26 00:04:13] Threads: 8
[2025-11-26 00:04:13] Checking for CVMFS
[2025-11-26 00:04:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:04:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:04:13] 2.13.3.0 12548 29604 358564 153309 1 192 32135760 40960000 32431 16776704 34 142756546 99.610 138194075 35623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:04:13] CVMFS is ok
[2025-11-26 00:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:04:13] Further information can be found at the LHC@home message board.
[2025-11-26 00:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:04:13] Checking for apptainer binary...
[2025-11-26 00:04:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:04:13] Running /usr/bin/apptainer --version
[2025-11-26 00:04:13] apptainer version 1.4.4-1.el9
[2025-11-26 00:04:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:04:13] c7-11-12.aglt2.org
[2025-11-26 00:04:13] apptainer works
[2025-11-26 00:04:13] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:04:13] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:04:14] Starting ATLAS job with PandaID=6897510057
[2025-11-26 00:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:44:32]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:44:32] 2025-11-26 21:43:19,816 | INFO     | monitor loop #4026: job 0:6897510057 is in state 'finished'
[2025-11-26 16:44:32] 2025-11-26 21:43:19,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:44:32] 2025-11-26 21:43:20,910 | INFO     | time since job start (59930s) is within the limit (172800.0s)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,426 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 16:44:32] 2025-11-26 21:43:21,430 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.6451093749993
[2025-11-26 16:44:32] 2025-11-26 21:43:21,440 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897510057/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,441 | INFO     | extracted standard info from prmon json
[2025-11-26 16:44:32] 2025-11-26 21:43:21,441 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:44:32] 2025-11-26 21:43:21,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:44:32] 2025-11-26 21:43:21,453 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:44:32] 2025-11-26 21:43:21,454 | INFO     | sum of square deviations: 293644107554.29333
[2025-11-26 16:44:32] 2025-11-26 21:43:21,470 | INFO     | sum of deviations: 2038931378197.526
[2025-11-26 16:44:32] 2025-11-26 21:43:21,470 | INFO     | mean x: 1764163431.8513238
[2025-11-26 16:44:32] 2025-11-26 21:43:21,471 | INFO     | mean y: 2908320.517311609
[2025-11-26 16:44:32] 2025-11-26 21:43:21,471 | INFO     | intersect: -12246641678.728725
[2025-11-26 16:44:32] 2025-11-26 21:43:21,471 | INFO     | chi2: 6.37413070459781
[2025-11-26 16:44:32] 2025-11-26 21:43:21,472 | INFO     | sum of square deviations: 289181701201.17365
[2025-11-26 16:44:32] 2025-11-26 21:43:21,488 | INFO     | sum of deviations: 2401692626362.478
[2025-11-26 16:44:32] 2025-11-26 21:43:21,488 | INFO     | mean x: 1764163279.3531218
[2025-11-26 16:44:32] 2025-11-26 21:43:21,488 | INFO     | mean y: 2920718.6131013306
[2025-11-26 16:44:32] 2025-11-26 21:43:21,488 | INFO     | intersect: -14648690784.198837
[2025-11-26 16:44:32] 2025-11-26 21:43:21,489 | INFO     | chi2: 2.6790429651938634
[2025-11-26 16:44:32] 2025-11-26 21:43:21,489 | INFO     | current chi2=2.6790429651938634 (change=57.970065419879035 %)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,490 | INFO     | sum of square deviations: 284764737560.5467
[2025-11-26 16:44:32] 2025-11-26 21:43:21,506 | INFO     | sum of deviations: 2489775615577.055
[2025-11-26 16:44:32] 2025-11-26 21:43:21,506 | INFO     | mean x: 1764163126.8549383
[2025-11-26 16:44:32] 2025-11-26 21:43:21,507 | INFO     | mean y: 2923753.8940329216
[2025-11-26 16:44:32] 2025-11-26 21:43:21,507 | INFO     | intersect: -15421634682.558058
[2025-11-26 16:44:32] 2025-11-26 21:43:21,507 | INFO     | chi2: 2.24688964116855
[2025-11-26 16:44:32] 2025-11-26 21:43:21,508 | INFO     | current chi2=2.24688964116855 (change=16.130884410584336 %)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,508 | INFO     | right removable region: 971
[2025-11-26 16:44:32] 2025-11-26 21:43:21,509 | INFO     | sum of square deviations: 289181490751.1739
[2025-11-26 16:44:32] 2025-11-26 21:43:21,525 | INFO     | sum of deviations: 1797019481163.022
[2025-11-26 16:44:32] 2025-11-26 21:43:21,525 | INFO     | mean x: 1764163584.3531218
[2025-11-26 16:44:32] 2025-11-26 21:43:21,525 | INFO     | mean y: 2916573.878198567
[2025-11-26 16:44:32] 2025-11-26 21:43:21,525 | INFO     | intersect: -10959874719.596294
[2025-11-26 16:44:32] 2025-11-26 21:43:21,526 | INFO     | chi2: 4.423957955482965
[2025-11-26 16:44:32] 2025-11-26 21:43:21,526 | INFO     | current chi2=4.423957955482965 (change=30.595117036243696 %)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,527 | INFO     | sum of square deviations: 284764435975.9618
[2025-11-26 16:44:32] 2025-11-26 21:43:21,543 | INFO     | sum of deviations: 1713740661329.7988
[2025-11-26 16:44:32] 2025-11-26 21:43:21,543 | INFO     | mean x: 1764163736.8528807
[2025-11-26 16:44:32] 2025-11-26 21:43:21,543 | INFO     | mean y: 2919448.537037037
[2025-11-26 16:44:32] 2025-11-26 21:43:21,543 | INFO     | intersect: -10613993154.072922
[2025-11-26 16:44:32] 2025-11-26 21:43:21,544 | INFO     | chi2: 4.339112335176435
[2025-11-26 16:44:32] 2025-11-26 21:43:21,544 | INFO     | current chi2=4.339112335176435 (change=1.917866787169038 %)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,544 | INFO     | left removable region: 20
[2025-11-26 16:44:32] 2025-11-26 21:43:21,545 | INFO     | sum of square deviations: 266703753613.289
[2025-11-26 16:44:32] 2025-11-26 21:43:21,560 | INFO     | sum of deviations: 2045065172668.9573
[2025-11-26 16:44:32] 2025-11-26 21:43:21,560 | INFO     | mean x: 1764163706.360673
[2025-11-26 16:44:32] 2025-11-26 21:43:21,560 | INFO     | mean y: 2939755.6298633018
[2025-11-26 16:44:32] 2025-11-26 21:43:21,561 | INFO     | intersect: -13524540476.223276
[2025-11-26 16:44:32] 2025-11-26 21:43:21,561 | INFO     | chi2: 0.12123675700308097
[2025-11-26 16:44:32] 2025-11-26 21:43:21,561 | INFO     | current memory leak: 7.67 B/s (using 951 data points, chi2=0.12)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,562 | INFO     | could have reported an average CPU frequency of 3285 MHz (36 samples)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,562 | INFO     | ..............................
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . Timing measurements:
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . get job = 0 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . initial setup = 2 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . payload setup = 11 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . stage-in = 0 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . payload execution = 59881 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . stage-out = 4 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | . log creation = 1 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,563 | INFO     | ..............................
[2025-11-26 16:44:32] 2025-11-26 21:43:21,634 | INFO     | 
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | job summary report
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | --------------------------------------------------
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | PanDA job id: 6897510057
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | task id: 47556161
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | errors: (none)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | pilot state: finished 
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | transexitcode: 0
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | exeerrorcode: 0
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | exeerrordiag: 
[2025-11-26 16:44:32] 2025-11-26 21:43:21,635 | INFO     | exitcode: 0
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | exitmsg: OK
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | cpuconsumptiontime: 198692 s
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | nevents: 1000
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | neventsw: 0
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | pid: 1055460
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | pgrp: 1055460
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | corecount: 8
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | event service: False
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | sizes: {0: 2284265, 11: 2284555, 59896: 2336314, 59902: 2345308, 59905: 2345364, 59911: 2345610}
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | --------------------------------------------------
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | 
[2025-11-26 16:44:32] 2025-11-26 21:43:21,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 16:44:32] 2025-11-26 21:43:21,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | job 6897510057 has completed (purged errors)
[2025-11-26 16:44:32] 2025-11-26 21:43:21,660 | INFO     | overall cleanup function is called
[2025-11-26 16:44:32] 2025-11-26 21:43:22,679 | INFO     | --- collectZombieJob: --- 10, [1055460]
[2025-11-26 16:44:32] 2025-11-26 21:43:22,681 | INFO     | zombie collector waiting for pid 1055460
[2025-11-26 16:44:32] 2025-11-26 21:43:22,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:44:32] 2025-11-26 21:43:22,681 | INFO     | collected zombie processes
[2025-11-26 16:44:32] 2025-11-26 21:43:22,681 | INFO     | will attempt to kill all subprocesses of pid=1055460
[2025-11-26 16:44:32] 2025-11-26 21:43:23,232 | INFO     | process IDs to be killed: [1055460] (in reverse order)
[2025-11-26 16:44:32] 2025-11-26 21:43:23,422 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:44:32] 2025-11-26 21:43:23,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:44:32] 2025-11-26 21:43:23,456 | INFO     | did not find any defunct processes belonging to 1055460
[2025-11-26 16:44:32] 2025-11-26 21:43:23,478 | INFO     | did not find any defunct processes belonging to 1055460
[2025-11-26 16:44:32] 2025-11-26 21:43:23,479 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:44:32] 2025-11-26 21:43:23,479 | INFO     | ready for new job
[2025-11-26 16:44:32] 2025-11-26 21:43:23,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:44:32] 2025-11-26 21:43:23,489 | INFO     | ***************************************
[2025-11-26 16:44:32] 2025-11-26 21:43:23,489 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:44:32] 2025-11-26 21:43:23,489 | INFO     | ***************************************
[2025-11-26 16:44:32] 2025-11-26 21:43:23,489 | INFO     | 
[2025-11-26 16:44:32] 2025-11-26 21:43:23,497 | INFO     | architecture information:
[2025-11-26 16:44:32] 2025-11-26 21:43:23,501 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:44:32] 2025-11-26 21:43:23,524 | INFO     | cat /etc/os-release:
[2025-11-26 16:44:32] NAME="CentOS Linux"
[2025-11-26 16:44:32] VERSION="7 (Core)"
[2025-11-26 16:44:32] ID="centos"
[2025-11-26 16:44:32] ID_LIKE="rhel fedora"
[2025-11-26 16:44:32] VERSION_ID="7"
[2025-11-26 16:44:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:44:32] ANSI_COLOR="0;31"
[2025-11-26 16:44:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:44:32] HOME_URL="https://www.centos.org/"
[2025-11-26 16:44:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:44:32] 
[2025-11-26 16:44:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:44:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:44:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:44:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:44:32] 
[2025-11-26 16:44:32] 2025-11-26 21:43:23,524 | INFO     | ***************************************
[2025-11-26 16:44:32] 2025-11-26 21:43:24,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 16:44:32] 2025-11-26 21:43:24,045 | INFO     | sufficient remaining disk space (79280734208 B)
[2025-11-26 16:44:32] 2025-11-26 21:43:24,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:44:32] 2025-11-26 21:43:24,045 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:44:32] 2025-11-26 21:43:24,045 | INFO     | update_server=False
[2025-11-26 16:44:32] 2025-11-26 21:43:24,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:44:32] 2025-11-26 21:43:24,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:44:32] 2025-11-26 21:43:24,046 | INFO     | aborting loop
[2025-11-26 16:44:32] 2025-11-26 21:43:24,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:44:32] 2025-11-26 21:43:24,361 | INFO     | all data control threads have been joined
[2025-11-26 16:44:32] 2025-11-26 21:43:24,641 | INFO     | all payload control threads have been joined
[2025-11-26 16:44:32] 2025-11-26 21:43:25,047 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,050 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,368 | INFO     | [data] control thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,652 | INFO     | [payload] control thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,682 | INFO     | all job control threads have been joined
[2025-11-26 16:44:32] 2025-11-26 21:43:25,833 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,938 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:25,982 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:26,064 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:26,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:44:32] 2025-11-26 21:43:26,187 | INFO     | [job] validate thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:26,195 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:26,388 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:26,437 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:26,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:44:32] 2025-11-26 21:43:26,687 | INFO     | [job] control thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:27,662 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:30,113 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:44:32] 2025-11-26 21:43:54,999 | INFO     | PID=1043488 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:44:32] 2025-11-26 21:43:54,999 | INFO     | .. there are 48 such processes running
[2025-11-26 16:44:32] 2025-11-26 21:43:55,000 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:44:32] 2025-11-26 21:43:55,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:44:32] 2025-11-26 21:43:55,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:44:32] 2025-11-26 21:44:12,662 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:44:32] 2025-11-26 21:44:13,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973630404416)>', '<ExcThread(monitor, started 139973269362432)>']
[2025-11-26 16:44:32] 2025-11-26 21:44:14,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:44:32] 2025-11-26 21:44:14,116 | INFO     | [monitor] control thread has ended
[2025-11-26 16:44:32] 2025-11-26 21:44:18,418 | INFO     | all workflow threads have been joined
[2025-11-26 16:44:32] 2025-11-26 21:44:18,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:44:32] 2025-11-26 21:44:18,418 | INFO     | traces error code: 0
[2025-11-26 16:44:32] 2025-11-26 21:44:18,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:44:32] 2025-11-26 21:44:18,552 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:44:32] 2025-11-26 21:44:18,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:44:32] 2025-11-26 21:44:18,564 [wrapper] pilotpid: 1043488
[2025-11-26 16:44:32] 2025-11-26 21:44:18,577 [wrapper] Pilot exit status: 0
[2025-11-26 16:44:32] 2025-11-26 21:44:18,595 [wrapper] pandaids: 6897510057
[2025-11-26 16:44:32] 2025-11-26 21:44:18,719 [wrapper] cleanup supervisor_pilot 1598527 1043489
[2025-11-26 16:44:32] 2025-11-26 21:44:18,722 [wrapper] Test setup, not cleaning
[2025-11-26 16:44:32] 2025-11-26 21:44:18,725 [wrapper] apfmon messages muted
[2025-11-26 16:44:32] 2025-11-26 21:44:18,728 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:44:32] 2025-11-26 21:44:18,731 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:44:32]  *** Error codes and diagnostics ***
[2025-11-26 16:44:32]     "exeErrorCode": 0,
[2025-11-26 16:44:32]     "exeErrorDiag": "",
[2025-11-26 16:44:32]     "pilotErrorCode": 0,
[2025-11-26 16:44:32]     "pilotErrorDiag": "",
[2025-11-26 16:44:32]  *** Listing of results directory ***
[2025-11-26 16:44:32] total 1316928
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 16:44:32] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:44:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:04 run_atlas
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:04 job.xml
[2025-11-26 16:44:32] -rw-r--r--. 2 boincer umatlas 409654231 Nov 26 00:04 EVNT.47483658._002290.pool.root.1
[2025-11-26 16:44:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 16:44:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:04 shared
[2025-11-26 16:44:32] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:04 input.tar.gz
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:04 boinc_lockfile
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:04 pandaJob.out
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas        57 Nov 26 00:04 setup.sh.local
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-26 16:44:32] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas       532 Nov 26 16:31 boinc_task_state.xml
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 16:36 init_data.xml
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas 914411889 Nov 26 16:42 HITS.47556161._002740.pool.root.1
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas      1049 Nov 26 16:43 memory_monitor_summary.json
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:43 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas   2156698 Nov 26 16:43 log.47556161._002740.job.log.tgz.1
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas        95 Nov 26 16:43 pilot_heartbeat.json
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas      7907 Nov 26 16:43 heartbeat.json
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas      4824 Nov 26 16:44 pilotlog.txt
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas   8114355 Nov 26 16:44 log.47556161._002740.job.log.1
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas       353 Nov 26 16:44 output.list
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas       620 Nov 26 16:44 runtime_log
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas  10291200 Nov 26 16:44 result.tar.gz
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas       661 Nov 26 16:44 setKDmJbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7fJKDmRiBs0m.diag
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 16:44 runtime_log.err
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas        29 Nov 26 16:44 wrapper_checkpoint.txt
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 16:44 boinc_mmap_file
[2025-11-26 16:44:32] -rw-r--r--. 1 boincer umatlas     21320 Nov 26 16:44 stderr.txt
[2025-11-26 16:44:32] HITS file was successfully produced:
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas 914411889 Nov 26 16:42 shared/HITS.pool.root.1
[2025-11-26 16:44:32]  *** Contents of shared directory: ***
[2025-11-26 16:44:32] total 1303696
[2025-11-26 16:44:32] -rw-r--r--. 2 boincer umatlas 409654231 Nov 26 00:04 ATLAS.root_0
[2025-11-26 16:44:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:04 start_atlas.sh
[2025-11-26 16:44:32] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 00:04 input.tar.gz
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas 914411889 Nov 26 16:42 HITS.pool.root.1
[2025-11-26 16:44:32] -rw-------. 1 boincer umatlas  10291200 Nov 26 16:44 result.tar.gz
16:44:34 (1039732): run_atlas exited; CPU time 199609.124409
16:44:34 (1039732): called boinc_finish(0)

</stderr_txt>
]]>

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