Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:07 (2070649): wrapper (7.7.26015): starting
00:01:07 (2070649): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:01:07] Arguments: --nthreads 8
[2025-11-26 00:01:07] Threads: 8
[2025-11-26 00:01:07] Checking for CVMFS
[2025-11-26 00:01:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:01:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:01:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:01:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:01:08] 2.13.3.0 12531 29601 440052 153309 2 141 34561769 40960000 28099 16776704 0 148934061 99.688 135280395 39511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:01:08] CVMFS is ok
[2025-11-26 00:01:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:01:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:01:08] Further information can be found at the LHC@home message board.
[2025-11-26 00:01:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:01:08] Checking for apptainer binary...
[2025-11-26 00:01:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:01:08] Running /usr/bin/apptainer --version
[2025-11-26 00:01:08] apptainer version 1.4.4-1.el9
[2025-11-26 00:01:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:01:08] c7-13-33.aglt2.org
[2025-11-26 00:01:08] apptainer works
[2025-11-26 00:01:08] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:01:08] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:01:08] Starting ATLAS job with PandaID=6897508068
[2025-11-26 00:01:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:22:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:22:45] 2025-11-27 07:22:08,092 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:22:45] 2025-11-27 07:22:08,124 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3289.8115
[2025-11-27 02:22:45] 2025-11-27 07:22:08,224 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897508068/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,224 | INFO     | extracted standard info from prmon json
[2025-11-27 02:22:45] 2025-11-27 07:22:08,225 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:22:45] 2025-11-27 07:22:08,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:22:45] 2025-11-27 07:22:08,260 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:22:45] 2025-11-27 07:22:08,261 | INFO     | sum of square deviations: 1161433408566.366
[2025-11-27 02:22:45] 2025-11-27 07:22:08,401 | INFO     | sum of deviations: 6552539932493.971
[2025-11-27 02:22:45] 2025-11-27 07:22:08,401 | INFO     | mean x: 1764180727.3708951
[2025-11-27 02:22:45] 2025-11-27 07:22:08,401 | INFO     | mean y: 2897359.817772054
[2025-11-27 02:22:45] 2025-11-27 07:22:08,401 | INFO     | intersect: -9950204194.668383
[2025-11-27 02:22:45] 2025-11-27 07:22:08,415 | INFO     | chi2: 7.77773096524989
[2025-11-27 02:22:45] 2025-11-27 07:22:08,416 | INFO     | sum of square deviations: 1150251737380.6743
[2025-11-27 02:22:45] 2025-11-27 07:22:08,464 | INFO     | time since job start (94816s) is within the limit (172800.0s)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,612 | INFO     | sum of deviations: 7102682607161.752
[2025-11-27 02:22:45] 2025-11-27 07:22:08,612 | INFO     | mean x: 1764180574.872093
[2025-11-27 02:22:45] 2025-11-27 07:22:08,612 | INFO     | mean y: 2904864.5542635657
[2025-11-27 02:22:45] 2025-11-27 07:22:08,613 | INFO     | intersect: -10890723267.293287
[2025-11-27 02:22:45] 2025-11-27 07:22:08,614 | INFO     | chi2: 4.346747356382849
[2025-11-27 02:22:45] 2025-11-27 07:22:08,614 | INFO     | current chi2=4.346747356382849 (change=44.11291190446579 %)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,615 | INFO     | sum of square deviations: 1139142067544.9785
[2025-11-27 02:22:45] 2025-11-27 07:22:08,755 | INFO     | sum of deviations: 7128597436424.691
[2025-11-27 02:22:45] 2025-11-27 07:22:08,756 | INFO     | mean x: 1764180422.373299
[2025-11-27 02:22:45] 2025-11-27 07:22:08,756 | INFO     | mean y: 2905219.2644199613
[2025-11-27 02:22:45] 2025-11-27 07:22:08,756 | INFO     | intersect: -11037097950.335289
[2025-11-27 02:22:45] 2025-11-27 07:22:08,757 | INFO     | chi2: 4.246150325147085
[2025-11-27 02:22:45] 2025-11-27 07:22:08,757 | INFO     | current chi2=4.246150325147085 (change=2.314305916308781 %)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,757 | INFO     | right removable region: 1542
[2025-11-27 02:22:45] 2025-11-27 07:22:08,758 | INFO     | sum of square deviations: 1150251386020.6738
[2025-11-27 02:22:45] 2025-11-27 07:22:08,804 | INFO     | sum of deviations: 5992072879844.374
[2025-11-27 02:22:45] 2025-11-27 07:22:08,804 | INFO     | mean x: 1764180879.872093
[2025-11-27 02:22:45] 2025-11-27 07:22:08,804 | INFO     | mean y: 2905001.8856589147
[2025-11-27 02:22:45] 2025-11-27 07:22:08,804 | INFO     | intersect: -9187347262.875843
[2025-11-27 02:22:45] 2025-11-27 07:22:08,806 | INFO     | chi2: 4.504564692485718
[2025-11-27 02:22:45] 2025-11-27 07:22:08,806 | INFO     | current chi2=4.504564692485718 (change=42.08381965625123 %)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,807 | INFO     | sum of square deviations: 1139141364824.9797
[2025-11-27 02:22:45] 2025-11-27 07:22:08,853 | INFO     | sum of deviations: 5775024422651.169
[2025-11-27 02:22:45] 2025-11-27 07:22:08,853 | INFO     | mean x: 1764181032.373299
[2025-11-27 02:22:45] 2025-11-27 07:22:08,853 | INFO     | mean y: 2907979.013609851
[2025-11-27 02:22:45] 2025-11-27 07:22:08,853 | INFO     | intersect: -8940835846.40624
[2025-11-27 02:22:45] 2025-11-27 07:22:08,858 | INFO     | chi2: 4.070788753641865
[2025-11-27 02:22:45] 2025-11-27 07:22:08,859 | INFO     | current chi2=4.070788753641865 (change=9.629697172902317 %)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,859 | INFO     | left removable region: 20
[2025-11-27 02:22:45] 2025-11-27 07:22:08,860 | INFO     | sum of square deviations: 1093261430093.0316
[2025-11-27 02:22:45] 2025-11-27 07:22:08,945 | INFO     | sum of deviations: 6070158488203.171
[2025-11-27 02:22:45] 2025-11-27 07:22:08,945 | INFO     | mean x: 1764181001.8745072
[2025-11-27 02:22:45] 2025-11-27 07:22:08,945 | INFO     | mean y: 2919673.555847569
[2025-11-27 02:22:45] 2025-11-27 07:22:08,945 | INFO     | intersect: -9792411972.18239
[2025-11-27 02:22:45] 2025-11-27 07:22:08,949 | INFO     | chi2: 0.37005255910749263
[2025-11-27 02:22:45] 2025-11-27 07:22:08,950 | INFO     | current memory leak: 5.55 B/s (using 1522 data points, chi2=0.37)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,950 | INFO     | could have reported an average CPU frequency of 3285 MHz (56 samples)
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | ..............................
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . Timing measurements:
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . get job = 0 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . initial setup = 2 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . payload setup = 18 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . stage-in = 0 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . payload execution = 94733 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . stage-out = 5 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | . log creation = 1 s
[2025-11-27 02:22:45] 2025-11-27 07:22:08,951 | INFO     | ..............................
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | 
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | job summary report
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | --------------------------------------------------
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | PanDA job id: 6897508068
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | task id: 47556161
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | errors: (none)
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | pilot state: finished 
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | transexitcode: 0
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | exeerrorcode: 0
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | exeerrordiag: 
[2025-11-27 02:22:45] 2025-11-27 07:22:09,162 | INFO     | exitcode: 0
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | exitmsg: OK
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | cpuconsumptiontime: 196528 s
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | nevents: 1000
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | neventsw: 0
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | pid: 2101563
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | pgrp: 2101563
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | corecount: 8
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | event service: False
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 20: 2284583, 23: 2284611, 94755: 2354999, 94756: 2355126, 94762: 2364176, 94765: 2364232, 94778: 2364478}
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | --------------------------------------------------
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | 
[2025-11-27 02:22:45] 2025-11-27 07:22:09,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:22:45] 2025-11-27 07:22:09,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:22:45] 2025-11-27 07:22:09,267 | INFO     | job 6897508068 has completed (purged errors)
[2025-11-27 02:22:45] 2025-11-27 07:22:09,267 | INFO     | overall cleanup function is called
[2025-11-27 02:22:45] 2025-11-27 07:22:10,329 | INFO     | --- collectZombieJob: --- 10, [2101563]
[2025-11-27 02:22:45] 2025-11-27 07:22:10,330 | INFO     | zombie collector waiting for pid 2101563
[2025-11-27 02:22:45] 2025-11-27 07:22:10,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:22:45] 2025-11-27 07:22:10,330 | INFO     | collected zombie processes
[2025-11-27 02:22:45] 2025-11-27 07:22:10,330 | INFO     | will attempt to kill all subprocesses of pid=2101563
[2025-11-27 02:22:45] 2025-11-27 07:22:11,235 | INFO     | process IDs to be killed: [2101563] (in reverse order)
[2025-11-27 02:22:45] 2025-11-27 07:22:11,399 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:22:45] 2025-11-27 07:22:11,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:22:45] 2025-11-27 07:22:11,421 | INFO     | did not find any defunct processes belonging to 2101563
[2025-11-27 02:22:45] 2025-11-27 07:22:11,442 | INFO     | did not find any defunct processes belonging to 2101563
[2025-11-27 02:22:45] 2025-11-27 07:22:11,445 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:22:45] 2025-11-27 07:22:11,445 | INFO     | ready for new job
[2025-11-27 02:22:45] 2025-11-27 07:22:11,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:22:45] 2025-11-27 07:22:11,464 | INFO     | ***************************************
[2025-11-27 02:22:45] 2025-11-27 07:22:11,464 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:22:45] 2025-11-27 07:22:11,464 | INFO     | ***************************************
[2025-11-27 02:22:45] 2025-11-27 07:22:11,464 | INFO     | 
[2025-11-27 02:22:45] 2025-11-27 07:22:11,492 | INFO     | architecture information:
[2025-11-27 02:22:45] 2025-11-27 07:22:11,500 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:22:45] 2025-11-27 07:22:11,519 | INFO     | cat /etc/os-release:
[2025-11-27 02:22:45] NAME="CentOS Linux"
[2025-11-27 02:22:45] VERSION="7 (Core)"
[2025-11-27 02:22:45] ID="centos"
[2025-11-27 02:22:45] ID_LIKE="rhel fedora"
[2025-11-27 02:22:45] VERSION_ID="7"
[2025-11-27 02:22:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:22:45] ANSI_COLOR="0;31"
[2025-11-27 02:22:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:22:45] HOME_URL="https://www.centos.org/"
[2025-11-27 02:22:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:22:45] 
[2025-11-27 02:22:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:22:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:22:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:22:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:22:45] 
[2025-11-27 02:22:45] 2025-11-27 07:22:11,519 | INFO     | ***************************************
[2025-11-27 02:22:45] 2025-11-27 07:22:12,025 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 02:22:45] 2025-11-27 07:22:12,064 | INFO     | sufficient remaining disk space (75812044800 B)
[2025-11-27 02:22:45] 2025-11-27 07:22:12,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:22:45] 2025-11-27 07:22:12,064 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:22:45] 2025-11-27 07:22:12,064 | INFO     | update_server=False
[2025-11-27 02:22:45] 2025-11-27 07:22:12,064 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:22:45] 2025-11-27 07:22:12,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:22:45] 2025-11-27 07:22:12,202 | INFO     | all data control threads have been joined
[2025-11-27 02:22:45] 2025-11-27 07:22:12,290 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 02:22:45] 2025-11-27 07:22:12,291 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 02:22:45] 2025-11-27 07:22:12,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:22:45] 2025-11-27 07:22:12,291 | INFO     | will abort loop
[2025-11-27 02:22:45] 2025-11-27 07:22:12,673 | INFO     | all job control threads have been joined
[2025-11-27 02:22:45] 2025-11-27 07:22:13,049 | INFO     | all payload control threads have been joined
[2025-11-27 02:22:45] 2025-11-27 07:22:13,069 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,143 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,176 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,208 | INFO     | [data] control thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,297 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:22:45] 2025-11-27 07:22:13,632 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,638 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,665 | INFO     | [job] validate thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:13,685 | INFO     | [job] control thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:14,056 | INFO     | [payload] control thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:14,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:14,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:22:45] 2025-11-27 07:22:14,526 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:14,572 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:15,189 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:15,466 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:16,075 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:22:45] 2025-11-27 07:22:35,140 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:22:45] 2025-11-27 07:22:36,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233237829440)>', '<ExcThread(monitor, started 140232737408768)>']
[2025-11-27 02:22:45] 2025-11-27 07:22:41,450 | INFO     | all workflow threads have been joined
[2025-11-27 02:22:45] 2025-11-27 07:22:41,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:22:45] 2025-11-27 07:22:41,451 | INFO     | traces error code: 0
[2025-11-27 02:22:45] 2025-11-27 07:22:41,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:22:45] 2025-11-27 07:22:43,674 | INFO     | PID=2079022 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:22:45] 2025-11-27 07:22:43,674 | INFO     | .. there are 49 such processes running
[2025-11-27 02:22:45] 2025-11-27 07:22:43,675 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:22:45] 2025-11-27 07:22:43,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:22:45] 2025-11-27 07:22:43,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:22:45] 2025-11-27 07:22:43,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:22:45] 2025-11-27 07:22:43,675 | INFO     | [monitor] control thread has ended
[2025-11-27 02:22:45] 2025-11-27 07:22:44,324 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:22:45] 2025-11-27 07:22:44,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:22:45] 2025-11-27 07:22:44,329 [wrapper] pilotpid: 2079022
[2025-11-27 02:22:45] 2025-11-27 07:22:44,331 [wrapper] Pilot exit status: 0
[2025-11-27 02:22:45] 2025-11-27 07:22:44,345 [wrapper] pandaids: 6897508068
[2025-11-27 02:22:45] 2025-11-27 07:22:44,468 [wrapper] cleanup supervisor_pilot 1730716 2079023
[2025-11-27 02:22:45] 2025-11-27 07:22:44,475 [wrapper] Test setup, not cleaning
[2025-11-27 02:22:45] 2025-11-27 07:22:44,485 [wrapper] apfmon messages muted
[2025-11-27 02:22:45] 2025-11-27 07:22:44,501 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:22:45] 2025-11-27 07:22:44,506 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:22:45]  *** Error codes and diagnostics ***
[2025-11-27 02:22:45]     "exeErrorCode": 0,
[2025-11-27 02:22:45]     "exeErrorDiag": "",
[2025-11-27 02:22:45]     "pilotErrorCode": 0,
[2025-11-27 02:22:45]     "pilotErrorDiag": "",
[2025-11-27 02:22:45]  *** Listing of results directory ***
[2025-11-27 02:22:45] total 1314476
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 02:22:45] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:22:45] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:01 run_atlas
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:01 job.xml
[2025-11-27 02:22:45] -rw-r--r--. 2 boincer umatlas 409473394 Nov 26 00:01 EVNT.47483658._002278.pool.root.1
[2025-11-27 02:22:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:01 start_atlas.sh
[2025-11-27 02:22:45] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:01 shared
[2025-11-27 02:22:45] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 00:01 input.tar.gz
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:01 boinc_lockfile
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:01 pandaJob.out
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas        57 Nov 26 00:01 setup.sh.local
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas    991877 Nov 26 00:01 agis_schedconf.cvmfs.json
[2025-11-27 02:22:45] drwx------. 5 boincer umatlas      4096 Nov 26 00:01 pilot3
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:11 boinc_task_state.xml
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas      6901 Nov 27 02:18 init_data.xml
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas 902031294 Nov 27 02:21 HITS.47556161._002612.pool.root.1
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas      1049 Nov 27 02:21 memory_monitor_summary.json
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas   2596882 Nov 27 02:21 log.47556161._002612.job.log.tgz.1
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas      8576 Nov 27 02:22 heartbeat.json
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas       823 Nov 27 02:22 pilotlog.txt
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas        95 Nov 27 02:22 pilot_heartbeat.json
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas  12701108 Nov 27 02:22 log.47556161._002612.job.log.1
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas       353 Nov 27 02:22 output.list
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:22 runtime_log
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas  15319040 Nov 27 02:22 result.tar.gz
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:22 boinc_mmap_file
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 02:22 runtime_log.err
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas       662 Nov 27 02:22 EDEODm5aBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrfJKDmkHXIPm.diag
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:22 wrapper_checkpoint.txt
[2025-11-27 02:22:45] -rw-r--r--. 1 boincer umatlas     21328 Nov 27 02:22 stderr.txt
[2025-11-27 02:22:45] HITS file was successfully produced:
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas 902031294 Nov 27 02:21 shared/HITS.pool.root.1
[2025-11-27 02:22:45]  *** Contents of shared directory: ***
[2025-11-27 02:22:45] total 1296336
[2025-11-27 02:22:45] -rw-r--r--. 2 boincer umatlas 409473394 Nov 26 00:01 ATLAS.root_0
[2025-11-27 02:22:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:01 start_atlas.sh
[2025-11-27 02:22:45] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 00:01 input.tar.gz
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas 902031294 Nov 27 02:21 HITS.pool.root.1
[2025-11-27 02:22:45] -rw-------. 1 boincer umatlas  15319040 Nov 27 02:22 result.tar.gz
02:22:47 (2070649): run_atlas exited; CPU time 197498.750469
02:22:47 (2070649): called boinc_finish(0)

</stderr_txt>
]]>

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