Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:03:48 (2904721): wrapper (7.7.26015): starting
23:03:48 (2904721): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 23:03:48] Arguments: --nthreads 9
[2025-11-25 23:03:48] Threads: 9
[2025-11-25 23:03:48] Checking for CVMFS
[2025-11-25 23:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:03:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:03:49] 2.13.3.0 14259 28108 340736 153307 2 193 28209660 32935937 26046 16776704 0 164119165 99.792 87170410 34015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:03:49] CVMFS is ok
[2025-11-25 23:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:03:49] Further information can be found at the LHC@home message board.
[2025-11-25 23:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:03:49] Checking for apptainer binary...
[2025-11-25 23:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:03:49] Running /usr/bin/apptainer --version
[2025-11-25 23:03:49] apptainer version 1.4.4-1.el9
[2025-11-25 23:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:03:49] c-4-36.aglt2.org
[2025-11-25 23:03:49] apptainer works
[2025-11-25 23:03:49] Set ATHENA_PROC_NUMBER=9
[2025-11-25 23:03:49] Set ATHENA_CORE_NUMBER=9
[2025-11-25 23:03:49] Starting ATLAS job with PandaID=6897510053
[2025-11-25 23:03:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:05:16]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:05:16] 2025-11-26 23:04:18,510 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:05:16] 2025-11-26 23:04:18,512 | INFO     | sum of square deviations: 436794212824.008
[2025-11-26 18:05:16] 2025-11-26 23:04:18,567 | INFO     | sum of deviations: 2790902034431.4526
[2025-11-26 18:05:16] 2025-11-26 23:04:18,567 | INFO     | mean x: 1764164050.514719
[2025-11-26 18:05:16] 2025-11-26 23:04:18,568 | INFO     | mean y: 3114310.002676182
[2025-11-26 18:05:16] 2025-11-26 23:04:18,568 | INFO     | intersect: -11269033747.591139
[2025-11-26 18:05:16] 2025-11-26 23:04:18,569 | INFO     | chi2: 7.871630673134126
[2025-11-26 18:05:16] 2025-11-26 23:04:18,571 | INFO     | sum of square deviations: 430976154182.2451
[2025-11-26 18:05:16] 2025-11-26 23:04:18,601 | INFO     | sum of deviations: 3213679271726.653
[2025-11-26 18:05:16] 2025-11-26 23:04:18,601 | INFO     | mean x: 1764163898.0259857
[2025-11-26 18:05:16] 2025-11-26 23:04:18,601 | INFO     | mean y: 3125390.7016129033
[2025-11-26 18:05:16] 2025-11-26 23:04:18,602 | INFO     | intersect: -13151794889.683977
[2025-11-26 18:05:16] 2025-11-26 23:04:18,603 | INFO     | chi2: 4.469293224251135
[2025-11-26 18:05:16] 2025-11-26 23:04:18,603 | INFO     | current chi2=4.469293224251135 (change=43.2227779752824 %)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,605 | INFO     | sum of square deviations: 425210003490.1998
[2025-11-26 18:05:16] 2025-11-26 23:04:18,655 | INFO     | sum of deviations: 3465650221011.721
[2025-11-26 18:05:16] 2025-11-26 23:04:18,656 | INFO     | mean x: 1764163745.5373538
[2025-11-26 18:05:16] 2025-11-26 23:04:18,656 | INFO     | mean y: 3132048.5247524753
[2025-11-26 18:05:16] 2025-11-26 23:04:18,656 | INFO     | intersect: -14375585348.615013
[2025-11-26 18:05:16] 2025-11-26 23:04:18,657 | INFO     | chi2: 2.9944641616831706
[2025-11-26 18:05:16] 2025-11-26 23:04:18,658 | INFO     | current chi2=2.9944641616831706 (change=32.99915643407093 %)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,659 | INFO     | sum of square deviations: 419495325128.6571
[2025-11-26 18:05:16] 2025-11-26 23:04:18,690 | INFO     | sum of deviations: 3529369977088.6323
[2025-11-26 18:05:16] 2025-11-26 23:04:18,691 | INFO     | mean x: 1764163593.046112
[2025-11-26 18:05:16] 2025-11-26 23:04:18,691 | INFO     | mean y: 3133746.7522603977
[2025-11-26 18:05:16] 2025-11-26 23:04:18,691 | INFO     | intersect: -14839429798.050425
[2025-11-26 18:05:16] 2025-11-26 23:04:18,692 | INFO     | chi2: 2.7918232588527023
[2025-11-26 18:05:16] 2025-11-26 23:04:18,693 | INFO     | current chi2=2.7918232588527023 (change=6.767184106707261 %)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,693 | INFO     | right removable region: 1105
[2025-11-26 18:05:16] 2025-11-26 23:04:18,694 | INFO     | sum of square deviations: 430974502733.29755
[2025-11-26 18:05:16] 2025-11-26 23:04:18,719 | INFO     | time since job start (68410s) is within the limit (172800.0s)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,726 | INFO     | sum of deviations: 2437355221975.9688
[2025-11-26 18:05:16] 2025-11-26 23:04:18,726 | INFO     | mean x: 1764164203.0250895
[2025-11-26 18:05:16] 2025-11-26 23:04:18,726 | INFO     | mean y: 3123565.5367383515
[2025-11-26 18:05:16] 2025-11-26 23:04:18,727 | INFO     | intersect: -9974020802.391691
[2025-11-26 18:05:16] 2025-11-26 23:04:18,726 | INFO     | 68413s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 18:05:16] 2025-11-26 23:04:18,728 | INFO     | chi2: 5.43115643366001
[2025-11-26 18:05:16] 2025-11-26 23:04:18,729 | INFO     | current chi2=5.43115643366001 (change=31.003413915282565 %)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,730 | INFO     | sum of square deviations: 425207041112.6793
[2025-11-26 18:05:16] 2025-11-26 23:04:18,757 | INFO     | sum of deviations: 2347128220591.159
[2025-11-26 18:05:16] 2025-11-26 23:04:18,757 | INFO     | mean x: 1764164355.531053
[2025-11-26 18:05:16] 2025-11-26 23:04:18,757 | INFO     | mean y: 3125950.879387939
[2025-11-26 18:05:16] 2025-11-26 23:04:18,757 | INFO     | intersect: -9735000524.619555
[2025-11-26 18:05:16] 2025-11-26 23:04:18,758 | INFO     | chi2: 5.373709854019815
[2025-11-26 18:05:16] 2025-11-26 23:04:18,759 | INFO     | current chi2=5.373709854019815 (change=1.057722795170573 %)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,759 | INFO     | left removable region: 20
[2025-11-26 18:05:16] 2025-11-26 23:04:18,760 | INFO     | sum of square deviations: 396047443267.7007
[2025-11-26 18:05:16] 2025-11-26 23:04:18,785 | INFO     | sum of deviations: 2917257224591.43
[2025-11-26 18:05:16] 2025-11-26 23:04:18,786 | INFO     | mean x: 1764164172.58341
[2025-11-26 18:05:16] 2025-11-26 23:04:18,786 | INFO     | mean y: 3150030.8350230413
[2025-11-26 18:05:16] 2025-11-26 23:04:18,786 | INFO     | intersect: -12991557460.195599
[2025-11-26 18:05:16] 2025-11-26 23:04:18,787 | INFO     | chi2: 0.19933885869147666
[2025-11-26 18:05:16] 2025-11-26 23:04:18,788 | INFO     | current memory leak: 7.37 B/s (using 1085 data points, chi2=0.20)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,789 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2025-11-26 18:05:16] 2025-11-26 23:04:18,789 | INFO     | ..............................
[2025-11-26 18:05:16] 2025-11-26 23:04:18,789 | INFO     | . Timing measurements:
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . get job = 0 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . initial setup = 3 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . payload setup = 11 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . stage-in = 0 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . payload execution = 68356 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . stage-out = 4 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | . log creation = 0 s
[2025-11-26 18:05:16] 2025-11-26 23:04:18,790 | INFO     | ..............................
[2025-11-26 18:05:16] 2025-11-26 23:04:19,120 | INFO     | 
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | job summary report
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | --------------------------------------------------
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | PanDA job id: 6897510053
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | task id: 47556161
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | errors: (none)
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:05:16] 2025-11-26 23:04:19,121 | INFO     | pilot state: finished 
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | transexitcode: 0
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | exeerrorcode: 0
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | exeerrordiag: 
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | exitcode: 0
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | exitmsg: OK
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | cpuconsumptiontime: 304268 s
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | nevents: 1000
[2025-11-26 18:05:16] 2025-11-26 23:04:19,122 | INFO     | neventsw: 0
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | pid: 2914995
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | pgrp: 2914995
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | corecount: 9
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | event service: False
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | sizes: {0: 2284094, 1: 2284293, 2: 2284293, 9: 2284583, 13: 2284611, 68372: 2340860, 68373: 2340987, 68377: 2350093, 68391: 2350379}
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | --------------------------------------------------
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | 
[2025-11-26 18:05:16] 2025-11-26 23:04:19,123 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 18:05:16] 2025-11-26 23:04:19,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,144 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,144 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:05:16] 2025-11-26 23:04:19,144 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,144 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:05:16] 2025-11-26 23:04:19,144 | INFO     | job 6897510053 has completed (purged errors)
[2025-11-26 18:05:16] 2025-11-26 23:04:19,144 | INFO     | overall cleanup function is called
[2025-11-26 18:05:16] 2025-11-26 23:04:20,168 | INFO     | --- collectZombieJob: --- 10, [2914995]
[2025-11-26 18:05:16] 2025-11-26 23:04:20,169 | INFO     | zombie collector waiting for pid 2914995
[2025-11-26 18:05:16] 2025-11-26 23:04:20,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:05:16] 2025-11-26 23:04:20,169 | INFO     | collected zombie processes
[2025-11-26 18:05:16] 2025-11-26 23:04:20,169 | INFO     | will attempt to kill all subprocesses of pid=2914995
[2025-11-26 18:05:16] 2025-11-26 23:04:21,026 | INFO     | process IDs to be killed: [2914995] (in reverse order)
[2025-11-26 18:05:16] 2025-11-26 23:04:21,222 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:05:16] 2025-11-26 23:04:21,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:05:16] 2025-11-26 23:04:21,251 | INFO     | did not find any defunct processes belonging to 2914995
[2025-11-26 18:05:16] 2025-11-26 23:04:21,283 | INFO     | did not find any defunct processes belonging to 2914995
[2025-11-26 18:05:16] 2025-11-26 23:04:21,287 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:05:16] 2025-11-26 23:04:21,287 | INFO     | ready for new job
[2025-11-26 18:05:16] 2025-11-26 23:04:21,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:05:16] 2025-11-26 23:04:21,293 | INFO     | ***************************************
[2025-11-26 18:05:16] 2025-11-26 23:04:21,293 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:05:16] 2025-11-26 23:04:21,293 | INFO     | ***************************************
[2025-11-26 18:05:16] 2025-11-26 23:04:21,293 | INFO     | 
[2025-11-26 18:05:16] 2025-11-26 23:04:21,295 | INFO     | architecture information:
[2025-11-26 18:05:16] 2025-11-26 23:04:21,296 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:05:16] 2025-11-26 23:04:21,409 | INFO     | cat /etc/os-release:
[2025-11-26 18:05:16] NAME="CentOS Linux"
[2025-11-26 18:05:16] VERSION="7 (Core)"
[2025-11-26 18:05:16] ID="centos"
[2025-11-26 18:05:16] ID_LIKE="rhel fedora"
[2025-11-26 18:05:16] VERSION_ID="7"
[2025-11-26 18:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:05:16] ANSI_COLOR="0;31"
[2025-11-26 18:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:05:16] HOME_URL="https://www.centos.org/"
[2025-11-26 18:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:05:16] 
[2025-11-26 18:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:05:16] 
[2025-11-26 18:05:16] 2025-11-26 23:04:21,409 | INFO     | ***************************************
[2025-11-26 18:05:16] 2025-11-26 23:04:21,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 18:05:16] 2025-11-26 23:04:21,972 | INFO     | sufficient remaining disk space (72631713792 B)
[2025-11-26 18:05:16] 2025-11-26 23:04:21,972 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:05:16] 2025-11-26 23:04:21,972 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:05:16] 2025-11-26 23:04:21,972 | INFO     | update_server=False
[2025-11-26 18:05:16] 2025-11-26 23:04:21,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:05:16] 2025-11-26 23:04:21,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:05:16] 2025-11-26 23:04:21,974 | INFO     | aborting loop
[2025-11-26 18:05:16] 2025-11-26 23:04:22,103 | INFO     | all job control threads have been joined
[2025-11-26 18:05:16] 2025-11-26 23:04:22,122 | INFO     | all data control threads have been joined
[2025-11-26 18:05:16] 2025-11-26 23:04:22,925 | INFO     | all payload control threads have been joined
[2025-11-26 18:05:16] 2025-11-26 23:04:22,978 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:22,989 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,065 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,109 | INFO     | [job] control thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,128 | INFO     | [data] control thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,233 | INFO     | [job] validate thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,282 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:05:16] 2025-11-26 23:04:23,444 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:23,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:05:16] 2025-11-26 23:04:23,931 | INFO     | [payload] control thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:24,179 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:24,211 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:24,418 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:24,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:05:16] 2025-11-26 23:04:24,918 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:25,296 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:28,873 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:05:16] 2025-11-26 23:04:52,656 | INFO     | PID=2908502 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:05:16] 2025-11-26 23:04:52,656 | INFO     | .. there are 42 such processes running
[2025-11-26 18:05:16] 2025-11-26 23:04:52,657 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:05:16] 2025-11-26 23:04:52,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:05:16] 2025-11-26 23:04:52,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:05:16] 2025-11-26 23:05:10,663 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:05:16] 2025-11-26 23:05:11,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626917295936)>', '<ExcThread(monitor, started 139626408822528)>']
[2025-11-26 18:05:16] 2025-11-26 23:05:11,814 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:05:16] 2025-11-26 23:05:11,815 | INFO     | [monitor] control thread has ended
[2025-11-26 18:05:16] 2025-11-26 23:05:16,091 | INFO     | all workflow threads have been joined
[2025-11-26 18:05:16] 2025-11-26 23:05:16,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:05:16] 2025-11-26 23:05:16,092 | INFO     | traces error code: 0
[2025-11-26 18:05:16] 2025-11-26 23:05:16,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:05:16] 2025-11-26 23:05:16,280 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:05:16] 2025-11-26 23:05:16,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:05:16] 2025-11-26 23:05:16,289 [wrapper] pilotpid: 2908502
[2025-11-26 18:05:16] 2025-11-26 23:05:16,292 [wrapper] Pilot exit status: 0
[2025-11-26 18:05:16] 2025-11-26 23:05:16,308 [wrapper] pandaids: 6897510053
[2025-11-26 18:05:16] 2025-11-26 23:05:16,402 [wrapper] cleanup supervisor_pilot 3625868 2908503
[2025-11-26 18:05:16] 2025-11-26 23:05:16,423 [wrapper] Test setup, not cleaning
[2025-11-26 18:05:16] 2025-11-26 23:05:16,441 [wrapper] apfmon messages muted
[2025-11-26 18:05:16] 2025-11-26 23:05:16,530 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:05:16] 2025-11-26 23:05:16,534 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:05:16]  *** Error codes and diagnostics ***
[2025-11-26 18:05:16]     "exeErrorCode": 0,
[2025-11-26 18:05:16]     "exeErrorDiag": "",
[2025-11-26 18:05:16]     "pilotErrorCode": 0,
[2025-11-26 18:05:16]     "pilotErrorDiag": "",
[2025-11-26 18:05:16]  *** Listing of results directory ***
[2025-11-26 18:05:17] total 1320740
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 18:05:17] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:05:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:03 run_atlas
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:03 job.xml
[2025-11-26 18:05:17] -rw-r--r--. 2 boincer umatlas 409654231 Nov 25 23:03 EVNT.47483658._002290.pool.root.1
[2025-11-26 18:05:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:03 start_atlas.sh
[2025-11-26 18:05:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:03 shared
[2025-11-26 18:05:17] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 23:03 input.tar.gz
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:03 boinc_lockfile
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 23:03 pandaJob.out
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas        57 Nov 25 23:03 setup.sh.local
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas    991877 Nov 25 23:04 agis_schedconf.cvmfs.json
[2025-11-26 18:05:17] drwx------. 5 boincer umatlas      4096 Nov 25 23:04 pilot3
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:48 boinc_task_state.xml
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas      6661 Nov 26 18:00 init_data.xml
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas 916868365 Nov 26 18:03 HITS.47556161._002736.pool.root.1
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas      1058 Nov 26 18:03 memory_monitor_summary.json
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas   2343596 Nov 26 18:04 log.47556161._002736.job.log.tgz.1
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas      8612 Nov 26 18:04 heartbeat.json
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas        95 Nov 26 18:04 pilot_heartbeat.json
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas      4824 Nov 26 18:05 pilotlog.txt
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas   8650541 Nov 26 18:05 log.47556161._002736.job.log.1
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas       353 Nov 26 18:05 output.list
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:05 runtime_log
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas  11018240 Nov 26 18:05 result.tar.gz
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:05 boinc_mmap_file
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas       658 Nov 26 18:05 wCQMDm6aBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4aMKDmBYP39m.diag
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 18:05 runtime_log.err
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:05 wrapper_checkpoint.txt
[2025-11-26 18:05:17] -rw-r--r--. 1 boincer umatlas     21189 Nov 26 18:05 stderr.txt
[2025-11-26 18:05:17] HITS file was successfully produced:
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas 916868365 Nov 26 18:03 shared/HITS.pool.root.1
[2025-11-26 18:05:17]  *** Contents of shared directory: ***
[2025-11-26 18:05:17] total 1306800
[2025-11-26 18:05:17] -rw-r--r--. 2 boincer umatlas 409654231 Nov 25 23:03 ATLAS.root_0
[2025-11-26 18:05:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:03 start_atlas.sh
[2025-11-26 18:05:17] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 23:03 input.tar.gz
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas 916868365 Nov 26 18:03 HITS.pool.root.1
[2025-11-26 18:05:17] -rw-------. 1 boincer umatlas  11018240 Nov 26 18:05 result.tar.gz
18:05:18 (2904721): run_atlas exited; CPU time 306935.095834
18:05:18 (2904721): called boinc_finish(0)

</stderr_txt>
]]>

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