Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:43:08 (984382): wrapper (7.7.26015): starting
23:43:08 (984382): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:43:08] Arguments: --nthreads 8
[2025-11-25 23:43:08] Threads: 8
[2025-11-25 23:43:08] Checking for CVMFS
[2025-11-25 23:43:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:43:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:43:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:43:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:43:10] 2.13.3.0 6673 7113 252356 153309 0 193 21503383 32935936 58330 16776704 0 64635870 99.760 40499637 30545 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:43:10] CVMFS is ok
[2025-11-25 23:43:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:43:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:43:10] Further information can be found at the LHC@home message board.
[2025-11-25 23:43:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:43:10] Checking for apptainer binary...
[2025-11-25 23:43:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:43:10] Running /usr/bin/apptainer --version
[2025-11-25 23:43:10] apptainer version 1.4.4-1.el9
[2025-11-25 23:43:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:43:10] lc-10-9.aglt2.org
[2025-11-25 23:43:10] apptainer works
[2025-11-25 23:43:10] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:43:10] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:43:11] Starting ATLAS job with PandaID=6897507564
[2025-11-25 23:43:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:53:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:53:07] 2025-11-26 21:52:18,435 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:53:07] 2025-11-26 21:52:18,436 | INFO     | sum of square deviations: 318529201380.67175
[2025-11-26 16:53:07] 2025-11-26 21:52:18,458 | INFO     | sum of deviations: 2002249864181.034
[2025-11-26 16:53:07] 2025-11-26 21:52:18,458 | INFO     | mean x: 1764163131.6769078
[2025-11-26 16:53:07] 2025-11-26 21:52:18,458 | INFO     | mean y: 2863818.4479682855
[2025-11-26 16:53:07] 2025-11-26 21:52:18,458 | INFO     | intersect: -11086528850.991648
[2025-11-26 16:53:07] 2025-11-26 21:52:18,459 | INFO     | chi2: 9.727756847401066
[2025-11-26 16:53:07] 2025-11-26 21:52:18,461 | INFO     | sum of square deviations: 313817796521.54315
[2025-11-26 16:53:07] 2025-11-26 21:52:18,483 | INFO     | sum of deviations: 2362116174897.5166
[2025-11-26 16:53:07] 2025-11-26 21:52:18,485 | INFO     | mean x: 1764162979.1852589
[2025-11-26 16:53:07] 2025-11-26 21:52:18,485 | INFO     | mean y: 2875465.981075697
[2025-11-26 16:53:07] 2025-11-26 21:52:18,485 | INFO     | intersect: -13276033360.98477
[2025-11-26 16:53:07] 2025-11-26 21:52:18,487 | INFO     | chi2: 6.2347363501104685
[2025-11-26 16:53:07] 2025-11-26 21:52:18,487 | INFO     | current chi2=6.2347363501104685 (change=35.9077694075363 %)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,488 | INFO     | sum of square deviations: 309153090212.27045
[2025-11-26 16:53:07] 2025-11-26 21:52:18,509 | INFO     | sum of deviations: 2477665511325.6367
[2025-11-26 16:53:07] 2025-11-26 21:52:18,509 | INFO     | mean x: 1764162826.6936936
[2025-11-26 16:53:07] 2025-11-26 21:52:18,509 | INFO     | mean y: 2879240.4334334335
[2025-11-26 16:53:07] 2025-11-26 21:52:18,509 | INFO     | intersect: -14135764462.142838
[2025-11-26 16:53:07] 2025-11-26 21:52:18,511 | INFO     | chi2: 5.718113628217272
[2025-11-26 16:53:07] 2025-11-26 21:52:18,511 | INFO     | current chi2=5.718113628217272 (change=8.286199975144788 %)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,511 | INFO     | right removable region: 998
[2025-11-26 16:53:07] 2025-11-26 21:52:18,512 | INFO     | sum of square deviations: 313816764401.5429
[2025-11-26 16:53:07] 2025-11-26 21:52:18,533 | INFO     | sum of deviations: 1613739444267.738
[2025-11-26 16:53:07] 2025-11-26 21:52:18,533 | INFO     | mean x: 1764163284.1852589
[2025-11-26 16:53:07] 2025-11-26 21:52:18,533 | INFO     | mean y: 2876389.5229083668
[2025-11-26 16:53:07] 2025-11-26 21:52:18,534 | INFO     | intersect: -9068977637.293608
[2025-11-26 16:53:07] 2025-11-26 21:52:18,535 | INFO     | chi2: 5.841595598567244
[2025-11-26 16:53:07] 2025-11-26 21:52:18,535 | INFO     | current chi2=5.841595598567244 (change=39.949202162388296 %)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,536 | INFO     | sum of square deviations: 309151086974.65643
[2025-11-26 16:53:07] 2025-11-26 21:52:18,561 | INFO     | sum of deviations: 1377628964149.5005
[2025-11-26 16:53:07] 2025-11-26 21:52:18,561 | INFO     | mean x: 1764163436.6926928
[2025-11-26 16:53:07] 2025-11-26 21:52:18,562 | INFO     | mean y: 2884100.3013013015
[2025-11-26 16:53:07] 2025-11-26 21:52:18,562 | INFO     | intersect: -7858523315.939203
[2025-11-26 16:53:07] 2025-11-26 21:52:18,563 | INFO     | chi2: 4.377506380462576
[2025-11-26 16:53:07] 2025-11-26 21:52:18,563 | INFO     | current chi2=4.377506380462576 (change=25.063173124544296 %)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,564 | INFO     | sum of square deviations: 304532058481.3516
[2025-11-26 16:53:07] 2025-11-26 21:52:18,577 | INFO     | monitor loop #3345: job 0:6897507564 is in state 'finished'
[2025-11-26 16:53:07] 2025-11-26 21:52:18,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,609 | INFO     | sum of deviations: 1307586277106.9714
[2025-11-26 16:53:07] 2025-11-26 21:52:18,609 | INFO     | mean x: 1764163589.1971831
[2025-11-26 16:53:07] 2025-11-26 21:52:18,609 | INFO     | mean y: 2886412.5613682093
[2025-11-26 16:53:07] 2025-11-26 21:52:18,609 | INFO     | intersect: -7572001142.166393
[2025-11-26 16:53:07] 2025-11-26 21:52:18,610 | INFO     | chi2: 4.316007431262801
[2025-11-26 16:53:07] 2025-11-26 21:52:18,611 | INFO     | current chi2=4.316007431262801 (change=1.4048854268780189 %)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,611 | INFO     | left removable region: 30
[2025-11-26 16:53:07] 2025-11-26 21:52:18,616 | INFO     | sum of square deviations: 281255227986.3544
[2025-11-26 16:53:07] 2025-11-26 21:52:18,656 | INFO     | sum of deviations: 1664497087592.192
[2025-11-26 16:53:07] 2025-11-26 21:52:18,656 | INFO     | mean x: 1764163711.2241735
[2025-11-26 16:53:07] 2025-11-26 21:52:18,656 | INFO     | mean y: 2907420.897727273
[2025-11-26 16:53:07] 2025-11-26 21:52:18,656 | INFO     | intersect: -10437593118.032473
[2025-11-26 16:53:07] 2025-11-26 21:52:18,658 | INFO     | chi2: 0.16223513557373584
[2025-11-26 16:53:07] 2025-11-26 21:52:18,658 | INFO     | current memory leak: 5.92 B/s (using 968 data points, chi2=0.16)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,659 | INFO     | could have reported an average CPU frequency of 2702 MHz (37 samples)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,663 | INFO     | ..............................
[2025-11-26 16:53:07] 2025-11-26 21:52:18,663 | INFO     | . Timing measurements:
[2025-11-26 16:53:07] 2025-11-26 21:52:18,663 | INFO     | . get job = 0 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,663 | INFO     | . initial setup = 4 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,664 | INFO     | . payload setup = 43 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,664 | INFO     | . stage-in = 0 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,664 | INFO     | . payload execution = 61551 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,664 | INFO     | . stage-out = 6 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,664 | INFO     | . log creation = 0 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,664 | INFO     | ..............................
[2025-11-26 16:53:07] 2025-11-26 21:52:18,859 | INFO     | 
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | job summary report
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | --------------------------------------------------
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | PanDA job id: 6897507564
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | task id: 47556161
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | errors: (none)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | pilot state: finished 
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | transexitcode: 0
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | exeerrorcode: 0
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | exeerrordiag: 
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | exitcode: 0
[2025-11-26 16:53:07] 2025-11-26 21:52:18,860 | INFO     | exitmsg: OK
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | cpuconsumptiontime: 261775 s
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | nevents: 1000
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | neventsw: 0
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | pid: 999289
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | pgrp: 999289
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | corecount: 8
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | event service: False
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | sizes: {0: 2284038, 1: 2284094, 2: 2284122, 3: 2284349, 14: 2284349, 25: 2284377, 31: 2284795, 36: 2284823, 61598: 2337152, 61599: 2337151, 61607: 2346201, 61608: 
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | --------------------------------------------------
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | 
[2025-11-26 16:53:07] 2025-11-26 21:52:18,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 16:53:07] 2025-11-26 21:52:18,930 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | job 6897507564 has completed (purged errors)
[2025-11-26 16:53:07] 2025-11-26 21:52:18,932 | INFO     | overall cleanup function is called
[2025-11-26 16:53:07] 2025-11-26 21:52:19,965 | INFO     | --- collectZombieJob: --- 10, [999289]
[2025-11-26 16:53:07] 2025-11-26 21:52:19,965 | INFO     | zombie collector waiting for pid 999289
[2025-11-26 16:53:07] 2025-11-26 21:52:19,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:53:07] 2025-11-26 21:52:19,966 | INFO     | collected zombie processes
[2025-11-26 16:53:07] 2025-11-26 21:52:19,966 | INFO     | will attempt to kill all subprocesses of pid=999289
[2025-11-26 16:53:07] 2025-11-26 21:52:21,121 | INFO     | process IDs to be killed: [999289] (in reverse order)
[2025-11-26 16:53:07] 2025-11-26 21:52:21,370 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:53:07] 2025-11-26 21:52:21,371 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:53:07] 2025-11-26 21:52:21,399 | INFO     | did not find any defunct processes belonging to 999289
[2025-11-26 16:53:07] 2025-11-26 21:52:21,434 | INFO     | did not find any defunct processes belonging to 999289
[2025-11-26 16:53:07] 2025-11-26 21:52:21,437 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:53:07] 2025-11-26 21:52:21,447 | INFO     | ready for new job
[2025-11-26 16:53:07] 2025-11-26 21:52:21,451 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:53:07] 2025-11-26 21:52:21,456 | INFO     | ***************************************
[2025-11-26 16:53:07] 2025-11-26 21:52:21,456 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:53:07] 2025-11-26 21:52:21,456 | INFO     | ***************************************
[2025-11-26 16:53:07] 2025-11-26 21:52:21,456 | INFO     | 
[2025-11-26 16:53:07] 2025-11-26 21:52:21,462 | INFO     | architecture information:
[2025-11-26 16:53:07] 2025-11-26 21:52:21,463 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:53:07] 2025-11-26 21:52:21,492 | INFO     | cat /etc/os-release:
[2025-11-26 16:53:07] NAME="CentOS Linux"
[2025-11-26 16:53:07] VERSION="7 (Core)"
[2025-11-26 16:53:07] ID="centos"
[2025-11-26 16:53:07] ID_LIKE="rhel fedora"
[2025-11-26 16:53:07] VERSION_ID="7"
[2025-11-26 16:53:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:53:07] ANSI_COLOR="0;31"
[2025-11-26 16:53:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:53:07] HOME_URL="https://www.centos.org/"
[2025-11-26 16:53:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:53:07] 
[2025-11-26 16:53:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:53:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:53:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:53:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:53:07] 
[2025-11-26 16:53:07] 2025-11-26 21:52:21,494 | INFO     | ***************************************
[2025-11-26 16:53:07] 2025-11-26 21:52:22,000 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 16:53:07] 2025-11-26 21:52:22,057 | INFO     | sufficient remaining disk space (91168440320 B)
[2025-11-26 16:53:07] 2025-11-26 21:52:22,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:53:07] 2025-11-26 21:52:22,058 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:53:07] 2025-11-26 21:52:22,058 | INFO     | update_server=False
[2025-11-26 16:53:07] 2025-11-26 21:52:22,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:53:07] 2025-11-26 21:52:22,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:53:07] 2025-11-26 21:52:22,096 | INFO     | aborting loop
[2025-11-26 16:53:07] 2025-11-26 21:52:22,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:53:07] 2025-11-26 21:52:22,239 | INFO     | all payload control threads have been joined
[2025-11-26 16:53:07] 2025-11-26 21:52:22,452 | INFO     | all job control threads have been joined
[2025-11-26 16:53:07] 2025-11-26 21:52:22,559 | INFO     | all data control threads have been joined
[2025-11-26 16:53:07] 2025-11-26 21:52:22,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:53:07] 2025-11-26 21:52:23,063 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,102 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,216 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,245 | INFO     | [payload] control thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,458 | INFO     | [job] control thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,566 | INFO     | [data] control thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:53:07] 2025-11-26 21:52:23,891 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:23,895 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:24,105 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:24,163 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:24,425 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:24,426 | INFO     | [job] validate thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:24,571 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:24,885 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:26,856 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:53:07] 2025-11-26 21:52:52,759 | INFO     | PID=989015 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 16:53:07] 2025-11-26 21:52:52,759 | INFO     | .. there are 89 such processes running
[2025-11-26 16:53:07] 2025-11-26 21:52:52,759 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:53:07] 2025-11-26 21:52:52,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:53:07] 2025-11-26 21:52:52,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:53:07] 2025-11-26 21:53:00,990 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:53:07] 2025-11-26 21:53:01,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751537792832)>', '<ExcThread(monitor, started 139751038375680)>']
[2025-11-26 16:53:07] 2025-11-26 21:53:01,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:53:07] 2025-11-26 21:53:01,821 | INFO     | [monitor] control thread has ended
[2025-11-26 16:53:07] 2025-11-26 21:53:06,410 | INFO     | all workflow threads have been joined
[2025-11-26 16:53:07] 2025-11-26 21:53:06,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:53:07] 2025-11-26 21:53:06,414 | INFO     | traces error code: 0
[2025-11-26 16:53:07] 2025-11-26 21:53:06,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:53:07] 2025-11-26 21:53:06,652 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:53:07] 2025-11-26 21:53:06,666 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:53:07] 2025-11-26 21:53:06,678 [wrapper] pilotpid: 989015
[2025-11-26 16:53:07] 2025-11-26 21:53:06,690 [wrapper] Pilot exit status: 0
[2025-11-26 16:53:07] 2025-11-26 21:53:06,728 [wrapper] pandaids: 6897507564
[2025-11-26 16:53:07] 2025-11-26 21:53:06,909 [wrapper] cleanup supervisor_pilot 3252156 989016
[2025-11-26 16:53:07] 2025-11-26 21:53:06,921 [wrapper] Test setup, not cleaning
[2025-11-26 16:53:07] 2025-11-26 21:53:06,938 [wrapper] apfmon messages muted
[2025-11-26 16:53:07] 2025-11-26 21:53:06,952 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:53:07] 2025-11-26 21:53:06,970 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:53:07]  *** Error codes and diagnostics ***
[2025-11-26 16:53:07]     "exeErrorCode": 0,
[2025-11-26 16:53:07]     "exeErrorDiag": "",
[2025-11-26 16:53:07]     "pilotErrorCode": 0,
[2025-11-26 16:53:07]     "pilotErrorDiag": "",
[2025-11-26 16:53:07]  *** Listing of results directory ***
[2025-11-26 16:53:07] total 1334776
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 16:53:07] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:53:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:43 run_atlas
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:43 job.xml
[2025-11-26 16:53:07] -rw-r--r--. 2 boincer umatlas 413796208 Nov 25 23:43 EVNT.47483658._002276.pool.root.1
[2025-11-26 16:53:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:43 start_atlas.sh
[2025-11-26 16:53:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:43 shared
[2025-11-26 16:53:07] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 23:43 input.tar.gz
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:43 boinc_lockfile
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 23:43 pandaJob.out
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas        57 Nov 25 23:43 setup.sh.local
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas    991877 Nov 25 23:44 agis_schedconf.cvmfs.json
[2025-11-26 16:53:07] drwx------. 5 boincer umatlas      4096 Nov 25 23:44 pilot3
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas       533 Nov 26 16:40 boinc_task_state.xml
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas      6887 Nov 26 16:45 init_data.xml
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas 930248195 Nov 26 16:51 HITS.47556161._002592.pool.root.1
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas      1059 Nov 26 16:51 memory_monitor_summary.json
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas   2114870 Nov 26 16:52 log.47556161._002592.job.log.tgz.1
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas      8622 Nov 26 16:52 heartbeat.json
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas        95 Nov 26 16:52 pilot_heartbeat.json
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 16:53 boinc_mmap_file
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas        29 Nov 26 16:53 wrapper_checkpoint.txt
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas      4823 Nov 26 16:53 pilotlog.txt
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas   7305002 Nov 26 16:53 log.47556161._002592.job.log.1
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas       353 Nov 26 16:53 output.list
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas       620 Nov 26 16:53 runtime_log
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas   9441280 Nov 26 16:53 result.tar.gz
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 16:53 runtime_log.err
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas       659 Nov 26 16:53 gPgNDm5aBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZfJKDm4Gwllm.diag
[2025-11-26 16:53:07] -rw-r--r--. 1 boincer umatlas     21214 Nov 26 16:53 stderr.txt
[2025-11-26 16:53:07] HITS file was successfully produced:
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas 930248195 Nov 26 16:51 shared/HITS.pool.root.1
[2025-11-26 16:53:07]  *** Contents of shared directory: ***
[2025-11-26 16:53:07] total 1322372
[2025-11-26 16:53:07] -rw-r--r--. 2 boincer umatlas 413796208 Nov 25 23:43 ATLAS.root_0
[2025-11-26 16:53:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:43 start_atlas.sh
[2025-11-26 16:53:07] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 23:43 input.tar.gz
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas 930248195 Nov 26 16:51 HITS.pool.root.1
[2025-11-26 16:53:07] -rw-------. 1 boincer umatlas   9441280 Nov 26 16:53 result.tar.gz
16:53:09 (984382): run_atlas exited; CPU time 265249.912255
16:53:09 (984382): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN