Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:53 (28419): wrapper (7.7.26015): starting
10:30:53 (28419): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 10:30:53] Arguments: --nthreads 8
[2025-11-28 10:30:53] Threads: 8
[2025-11-28 10:30:53] Checking for CVMFS
[2025-11-28 10:30:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 10:30:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 10:30:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 10:30:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 10:30:55] 2.11.2.0 4058 288045 138632 153404 2 84 13096540 25165824 1288 130560 8 146961273 99.882 84921227 3048 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 10:30:55] CVMFS is ok
[2025-11-28 10:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 10:30:55] Checking for apptainer binary...
[2025-11-28 10:30:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 10:30:55] Running /usr/bin/apptainer --version
[2025-11-28 10:30:55] apptainer version 1.3.2-1.el7
[2025-11-28 10:30:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 10:31:13] cg-vwn233.simple-grid.lan
[2025-11-28 10:31:13] apptainer works
[2025-11-28 10:31:13] Set ATHENA_PROC_NUMBER=8
[2025-11-28 10:31:13] Set ATHENA_CORE_NUMBER=8
[2025-11-28 10:31:14] Starting ATLAS job with PandaID=6891571124
[2025-11-28 10:31:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 09:21:12]  *** The last 200 lines of the pilot log: ***
[2025-11-29 09:21:12] 2025-11-29 08:20:08,527 | INFO     | monitor loop #5538: job 0:6891571124 is in state 'finished'
[2025-11-29 09:21:12] 2025-11-29 08:20:08,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 09:21:12] 2025-11-29 08:20:10,464 | INFO     | time since job start (81930s) is within the limit (172800.0s)
[2025-11-29 09:21:12] 2025-11-29 08:20:11,033 | INFO     | monitor loop #5539: job 0:6891571124 is in state 'finished'
[2025-11-29 09:21:12] 2025-11-29 08:20:11,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 09:21:12] 2025-11-29 08:20:12,473 | INFO     | time since job start (81932s) is within the limit (172800.0s)
[2025-11-29 09:21:12] 2025-11-29 08:20:13,538 | INFO     | monitor loop #5540: job 0:6891571124 is in state 'finished'
[2025-11-29 09:21:12] 2025-11-29 08:20:13,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 09:21:12] 2025-11-29 08:20:14,480 | INFO     | time since job start (81934s) is within the limit (172800.0s)
[2025-11-29 09:21:12] 2025-11-29 08:20:14,481 | INFO     | 81940s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-29 09:21:12] 2025-11-29 08:20:16,053 | INFO     | monitor loop #5541: job 0:6891571124 is in state 'finished'
[2025-11-29 09:21:12] 2025-11-29 08:20:16,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 09:21:12] 2025-11-29 08:20:16,487 | INFO     | time since job start (81936s) is within the limit (172800.0s)
[2025-11-29 09:21:12] 2025-11-29 08:20:16,684 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 09:21:12] 2025-11-29 08:20:16,685 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-29 09:21:12] 2025-11-29 08:20:16,687 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6891571124/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 09:21:12] 2025-11-29 08:20:16,688 | INFO     | extracted standard info from prmon json
[2025-11-29 09:21:12] 2025-11-29 08:20:16,688 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 09:21:12] 2025-11-29 08:20:16,688 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 09:21:12] 2025-11-29 08:20:16,716 | INFO     | fitting pss+swap vs Time
[2025-11-29 09:21:12] 2025-11-29 08:20:16,719 | INFO     | sum of square deviations: 734458092861.3285
[2025-11-29 09:21:12] 2025-11-29 08:20:16,807 | INFO     | sum of deviations: 2794373972007.5107
[2025-11-29 09:21:12] 2025-11-29 08:20:16,807 | INFO     | mean x: 1764363629.1012752
[2025-11-29 09:21:12] 2025-11-29 08:20:16,807 | INFO     | mean y: 2850593.640660165
[2025-11-29 09:21:12] 2025-11-29 08:20:16,807 | INFO     | intersect: -6709978702.187107
[2025-11-29 09:21:12] 2025-11-29 08:20:16,809 | INFO     | chi2: 17.1338342759911
[2025-11-29 09:21:12] 2025-11-29 08:20:16,811 | INFO     | sum of square deviations: 726224749005.2413
[2025-11-29 09:21:12] 2025-11-29 08:20:16,901 | INFO     | sum of deviations: 3250248821079.1807
[2025-11-29 09:21:12] 2025-11-29 08:20:16,902 | INFO     | mean x: 1764363476.6054218
[2025-11-29 09:21:12] 2025-11-29 08:20:16,902 | INFO     | mean y: 2859036.5308734938
[2025-11-29 09:21:12] 2025-11-29 08:20:16,902 | INFO     | intersect: -7893622483.338878
[2025-11-29 09:21:12] 2025-11-29 08:20:16,903 | INFO     | chi2: 13.762592875158415
[2025-11-29 09:21:12] 2025-11-29 08:20:16,903 | INFO     | current chi2=13.762592875158415 (change=19.675930947672693 %)
[2025-11-29 09:21:12] 2025-11-29 08:20:16,904 | INFO     | right removable region: 1327
[2025-11-29 09:21:12] 2025-11-29 08:20:16,905 | INFO     | sum of square deviations: 726223853525.2404
[2025-11-29 09:21:12] 2025-11-29 08:20:16,970 | INFO     | sum of deviations: 2258638616268.429
[2025-11-29 09:21:12] 2025-11-29 08:20:16,970 | INFO     | mean x: 1764363781.6054218
[2025-11-29 09:21:12] 2025-11-29 08:20:16,970 | INFO     | mean y: 2860514.2183734938
[2025-11-29 09:21:12] 2025-11-29 08:20:16,970 | INFO     | intersect: -5484511114.977086
[2025-11-29 09:21:12] 2025-11-29 08:20:16,972 | INFO     | chi2: 12.889813923768159
[2025-11-29 09:21:12] 2025-11-29 08:20:16,972 | INFO     | current chi2=12.889813923768159 (change=24.76982258530364 %)
[2025-11-29 09:21:12] 2025-11-29 08:20:16,972 | INFO     | left removable region: 10
[2025-11-29 09:21:12] 2025-11-29 08:20:16,974 | INFO     | sum of square deviations: 708326699585.6678
[2025-11-29 09:21:12] 2025-11-29 08:20:17,022 | INFO     | sum of deviations: 2424395119571.1304
[2025-11-29 09:21:12] 2025-11-29 08:20:17,023 | INFO     | mean x: 1764363751.1146545
[2025-11-29 09:21:12] 2025-11-29 08:20:17,023 | INFO     | mean y: 2878401.3766135154
[2025-11-29 09:21:12] 2025-11-29 08:20:17,023 | INFO     | intersect: -6036022673.300779
[2025-11-29 09:21:12] 2025-11-29 08:20:17,025 | INFO     | chi2: 6.39731068722609
[2025-11-29 09:21:12] 2025-11-29 08:20:17,025 | INFO     | current memory leak: 3.42 B/s (using 1317 data points, chi2=6.40)
[2025-11-29 09:21:12] 2025-11-29 08:20:17,026 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-29 09:21:12] 2025-11-29 08:20:17,026 | INFO     | ..............................
[2025-11-29 09:21:12] 2025-11-29 08:20:17,026 | INFO     | . Timing measurements:
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . get job = 0 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . initial setup = 6 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . payload setup = 153 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . stage-in = 0 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . payload execution = 81461 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . stage-out = 4 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | . log creation = 2 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,027 | INFO     | ..............................
[2025-11-29 09:21:12] 2025-11-29 08:20:17,142 | INFO     | 
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | job summary report
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | --------------------------------------------------
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | PanDA job id: 6891571124
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | task id: 47493068
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | errors: (none)
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | pilot state: finished 
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | transexitcode: 0
[2025-11-29 09:21:12] 2025-11-29 08:20:17,143 | INFO     | exeerrorcode: 0
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | exeerrordiag: 
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | exitcode: 0
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | exitmsg: OK
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | cpuconsumptiontime: 306814 s
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | nevents: 1000
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | neventsw: 0
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | pid: 6431
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | pgrp: 6431
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | corecount: 8
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | event service: False
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | sizes: {0: 2284303, 1: 2284303, 11: 2284331, 22: 2284359, 33: 2284387, 44: 2284443, 54: 2284599, 65: 2284627, 76: 2284655, 86: 2284711, 97: 2284739, 103: 2285309, 
[2025-11-29 09:21:12] 2025-11-29 08:20:17,144 | INFO     | --------------------------------------------------
[2025-11-29 09:21:12] 2025-11-29 08:20:17,145 | INFO     | 
[2025-11-29 09:21:12] 2025-11-29 08:20:17,145 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-29 09:21:12] 2025-11-29 08:20:17,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 09:21:12] 2025-11-29 08:20:17,501 | INFO     | job 6891571124 has completed (purged errors)
[2025-11-29 09:21:12] 2025-11-29 08:20:17,501 | INFO     | overall cleanup function is called
[2025-11-29 09:21:12] 2025-11-29 08:20:18,522 | INFO     | --- collectZombieJob: --- 10, [6431]
[2025-11-29 09:21:12] 2025-11-29 08:20:18,523 | INFO     | zombie collector waiting for pid 6431
[2025-11-29 09:21:12] 2025-11-29 08:20:18,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 09:21:12] 2025-11-29 08:20:18,523 | INFO     | collected zombie processes
[2025-11-29 09:21:12] 2025-11-29 08:20:18,523 | INFO     | will attempt to kill all subprocesses of pid=6431
[2025-11-29 09:21:12] 2025-11-29 08:20:18,663 | INFO     | process IDs to be killed: [6431] (in reverse order)
[2025-11-29 09:21:12] 2025-11-29 08:20:19,681 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 09:21:12] 2025-11-29 08:20:19,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 09:21:12] 2025-11-29 08:20:19,689 | INFO     | did not find any defunct processes belonging to 6431
[2025-11-29 09:21:12] 2025-11-29 08:20:19,692 | INFO     | did not find any defunct processes belonging to 6431
[2025-11-29 09:21:12] 2025-11-29 08:20:19,755 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 09:21:12] 2025-11-29 08:20:19,755 | INFO     | ready for new job
[2025-11-29 09:21:12] 2025-11-29 08:20:19,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 09:21:12] 2025-11-29 08:20:19,761 | INFO     | ***************************************
[2025-11-29 09:21:12] 2025-11-29 08:20:19,761 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 09:21:12] 2025-11-29 08:20:19,761 | INFO     | ***************************************
[2025-11-29 09:21:12] 2025-11-29 08:20:19,761 | INFO     | 
[2025-11-29 09:21:12] 2025-11-29 08:20:19,762 | INFO     | pilot is running in a VM
[2025-11-29 09:21:12] 2025-11-29 08:20:19,762 | INFO     | architecture information:
[2025-11-29 09:21:12] 2025-11-29 08:20:19,763 | INFO     | executing command: cat /etc/os-release
[2025-11-29 09:21:12] 2025-11-29 08:20:19,881 | INFO     | cat /etc/os-release:
[2025-11-29 09:21:12] NAME="CentOS Linux"
[2025-11-29 09:21:12] VERSION="7 (Core)"
[2025-11-29 09:21:12] ID="centos"
[2025-11-29 09:21:12] ID_LIKE="rhel fedora"
[2025-11-29 09:21:12] VERSION_ID="7"
[2025-11-29 09:21:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 09:21:12] ANSI_COLOR="0;31"
[2025-11-29 09:21:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 09:21:12] HOME_URL="https://www.centos.org/"
[2025-11-29 09:21:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 09:21:12] 
[2025-11-29 09:21:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 09:21:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 09:21:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 09:21:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 09:21:12] 
[2025-11-29 09:21:12] 2025-11-29 08:20:19,881 | INFO     | ***************************************
[2025-11-29 09:21:12] 2025-11-29 08:20:20,385 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-29 09:21:12] 2025-11-29 08:20:20,613 | INFO     | sufficient remaining disk space (493582548992 B)
[2025-11-29 09:21:12] 2025-11-29 08:20:20,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 09:21:12] 2025-11-29 08:20:20,614 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 09:21:12] 2025-11-29 08:20:20,614 | INFO     | update_server=False
[2025-11-29 09:21:12] 2025-11-29 08:20:20,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 09:21:12] 2025-11-29 08:20:20,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 09:21:12] 2025-11-29 08:20:20,709 | INFO     | all data control threads have been joined
[2025-11-29 09:21:12] 2025-11-29 08:20:20,841 | INFO     | all job control threads have been joined
[2025-11-29 09:21:12] 2025-11-29 08:20:21,102 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 09:21:12] 2025-11-29 08:20:21,103 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 09:21:12] 2025-11-29 08:20:21,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:21:12] 2025-11-29 08:20:21,103 | INFO     | will abort loop
[2025-11-29 09:21:12] 2025-11-29 08:20:21,620 | INFO     | [job] retrieve thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:21,716 | INFO     | [data] control thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:21,848 | INFO     | [job] control thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:21,968 | INFO     | [payload] failed_post thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,003 | INFO     | all payload control threads have been joined
[2025-11-29 09:21:12] 2025-11-29 08:20:22,110 | INFO     | [job] job monitor thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,139 | INFO     | [data] copytool_in thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:21:12] 2025-11-29 08:20:22,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,362 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,362 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,622 | INFO     | [data] copytool_out thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,794 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 09:21:12] 2025-11-29 08:20:22,816 | INFO     | [payload] validate_post thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,881 | INFO     | [job] validate thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:22,913 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:23,009 | INFO     | [payload] control thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:23,160 | INFO     | [job] queue monitor thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:26,803 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 09:21:12] 2025-11-29 08:20:36,619 [wrapper] supervise_pilot (15 min periods counter: 92)
[2025-11-29 09:21:12] 2025-11-29 08:20:49,721 | INFO     | PID=32226 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 09:21:12] 2025-11-29 08:20:49,721 | INFO     | .. there are 9 such processes running
[2025-11-29 09:21:12] 2025-11-29 08:20:49,721 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 09:21:12] 2025-11-29 08:20:49,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 09:21:12] 2025-11-29 08:20:49,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 09:21:12] 2025-11-29 08:21:02,624 | INFO     | [monitor] cgroup control has ended
[2025-11-29 09:21:12] 2025-11-29 08:21:03,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419783608128)>', '<ExcThread(monitor, started 140419107116800)>']
[2025-11-29 09:21:12] 2025-11-29 08:21:04,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 09:21:12] 2025-11-29 08:21:04,811 | INFO     | [monitor] control thread has ended
[2025-11-29 09:21:12] 2025-11-29 08:21:08,994 | INFO     | all workflow threads have been joined
[2025-11-29 09:21:12] 2025-11-29 08:21:08,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 09:21:12] 2025-11-29 08:21:08,995 | INFO     | traces error code: 0
[2025-11-29 09:21:12] 2025-11-29 08:21:08,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 09:21:12] 2025-11-29 08:21:09,343 [wrapper] ==== pilot stdout END ====
[2025-11-29 09:21:12] 2025-11-29 08:21:09,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 09:21:12] 2025-11-29 08:21:09,535 [wrapper] pilotpid: 32226
[2025-11-29 09:21:12] 2025-11-29 08:21:09,599 [wrapper] Pilot exit status: 0
[2025-11-29 09:21:12] 2025-11-29 08:21:09,955 [wrapper] pandaids: 6891571124
[2025-11-29 09:21:12] 2025-11-29 08:21:10,439 [wrapper] cleanup supervisor_pilot 31480 32227
[2025-11-29 09:21:12] 2025-11-29 08:21:10,503 [wrapper] Test setup, not cleaning
[2025-11-29 09:21:12] 2025-11-29 08:21:10,601 [wrapper] apfmon messages muted
[2025-11-29 09:21:12] 2025-11-29 08:21:10,689 [wrapper] ==== wrapper stdout END ====
[2025-11-29 09:21:12] 2025-11-29 08:21:10,717 [wrapper] ==== wrapper stderr END ====
[2025-11-29 09:21:12]  *** Error codes and diagnostics ***
[2025-11-29 09:21:12]     "exeErrorCode": 0,
[2025-11-29 09:21:12]     "exeErrorDiag": "",
[2025-11-29 09:21:12]     "pilotErrorCode": 0,
[2025-11-29 09:21:12]     "pilotErrorDiag": "",
[2025-11-29 09:21:12]  *** Listing of results directory ***
[2025-11-29 09:21:12] total 1311912
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-29 09:21:12] -rwx------. 1 boinc boinc     36292 Nov 18 16:41 runpilot2-wrapper.sh
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc       100 Nov 28 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 09:21:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 10:30 run_atlas
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc       105 Nov 28 10:30 job.xml
[2025-11-29 09:21:12] -rw-r--r--. 2 boinc boinc 409733417 Nov 28 10:30 EVNT.47493065._000266.pool.root.1
[2025-11-29 09:21:12] -rw-r--r--. 2 boinc boinc     15120 Nov 28 10:30 start_atlas.sh
[2025-11-29 09:21:12] drwxrwx--x. 2 boinc boinc        68 Nov 28 10:30 shared
[2025-11-29 09:21:12] -rw-r--r--. 2 boinc boinc    590102 Nov 28 10:30 input.tar.gz
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc      6392 Nov 28 10:30 init_data.xml
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc         0 Nov 28 10:30 boinc_lockfile
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc      2772 Nov 28 10:31 pandaJob.out
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc    991864 Nov 28 10:34 agis_schedconf.cvmfs.json
[2025-11-29 09:21:12] drwx------. 5 boinc boinc      4096 Nov 28 10:34 pilot3
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc       533 Nov 29 08:58 boinc_task_state.xml
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc 903121958 Nov 29 09:17 HITS.47493068._002660.pool.root.1
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc      1033 Nov 29 09:18 memory_monitor_summary.json
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc   1516240 Nov 29 09:18 agis_ddmendpoints.agis.ALL.json
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc   2428763 Nov 29 09:18 log.47493068._002660.job.log.tgz.1
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc        95 Nov 29 09:19 pilot_heartbeat.json
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc      7956 Nov 29 09:20 heartbeat.json
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc        29 Nov 29 09:20 wrapper_checkpoint.txt
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc      8192 Nov 29 09:20 boinc_mmap_file
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc      5070 Nov 29 09:21 pilotlog.txt
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc  10890327 Nov 29 09:21 log.47493068._002660.job.log.1
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc       353 Nov 29 09:21 output.list
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc       620 Nov 29 09:21 runtime_log
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc  13342720 Nov 29 09:21 result.tar.gz
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc      8703 Nov 29 09:21 runtime_log.err
[2025-11-29 09:21:12] -rw-------. 1 boinc boinc       662 Nov 29 09:21 9wkLDma0cf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzdFKDmCSNKgn.diag
[2025-11-29 09:21:12] -rw-r--r--. 1 boinc boinc     21401 Nov 29 09:21 stderr.txt
[2025-11-29 09:21:13] HITS file was successfully produced:
[2025-11-29 09:21:13] -rw-------. 1 boinc boinc 903121958 Nov 29 09:17 shared/HITS.pool.root.1
[2025-11-29 09:21:13]  *** Contents of shared directory: ***
[2025-11-29 09:21:13] total 1295716
[2025-11-29 09:21:13] -rw-r--r--. 2 boinc boinc 409733417 Nov 28 10:30 ATLAS.root_0
[2025-11-29 09:21:13] -rw-r--r--. 2 boinc boinc     15120 Nov 28 10:30 start_atlas.sh
[2025-11-29 09:21:13] -rw-r--r--. 2 boinc boinc    590102 Nov 28 10:30 input.tar.gz
[2025-11-29 09:21:13] -rw-------. 1 boinc boinc 903121958 Nov 29 09:17 HITS.pool.root.1
[2025-11-29 09:21:13] -rw-------. 1 boinc boinc  13342720 Nov 29 09:21 result.tar.gz
09:21:14 (28419): run_atlas exited; CPU time 307341.879420
09:21:14 (28419): called boinc_finish(0)

</stderr_txt>
]]>

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