Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:59:53 (3748783): wrapper (7.7.26015): starting
22:59:53 (3748783): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:59:53] Arguments: --nthreads 8
[2025-11-25 22:59:53] Threads: 8
[2025-11-25 22:59:53] Checking for CVMFS
[2025-11-25 22:59:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:59:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:59:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:59:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:59:55] 2.13.3.0 16090 29493 428272 153307 3 768 22461251 32935936 62359 16776704 0 414644078 99.629 374348199 52822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:59:55] CVMFS is ok
[2025-11-25 22:59:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:59:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:59:55] Further information can be found at the LHC@home message board.
[2025-11-25 22:59:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:59:55] Checking for apptainer binary...
[2025-11-25 22:59:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:59:55] Running /usr/bin/apptainer --version
[2025-11-25 22:59:55] apptainer version 1.4.4-1.el9
[2025-11-25 22:59:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:59:56] c7-9-15.aglt2.org
[2025-11-25 22:59:56] apptainer works
[2025-11-25 22:59:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:59:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:59:56] Starting ATLAS job with PandaID=6897507459
[2025-11-25 22:59:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:25:00]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:25:00] 2025-11-26 12:23:57,801 | INFO     | time since job start (30175s) is within the limit (172800.0s)
[2025-11-26 07:25:00] 2025-11-26 12:23:58,055 | INFO     | monitor loop #1788: job 0:6897507459 is in state 'finished'
[2025-11-26 07:25:00] 2025-11-26 12:23:58,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:25:00] 2025-11-26 12:23:59,808 | INFO     | time since job start (30177s) is within the limit (172800.0s)
[2025-11-26 07:25:00] 2025-11-26 12:24:00,562 | INFO     | monitor loop #1789: job 0:6897507459 is in state 'finished'
[2025-11-26 07:25:00] 2025-11-26 12:24:00,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:25:00] 2025-11-26 12:24:01,814 | INFO     | time since job start (30179s) is within the limit (172800.0s)
[2025-11-26 07:25:00] 2025-11-26 12:24:03,073 | INFO     | monitor loop #1790: job 0:6897507459 is in state 'finished'
[2025-11-26 07:25:00] 2025-11-26 12:24:03,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:25:00] 2025-11-26 12:24:03,834 | INFO     | time since job start (30181s) is within the limit (172800.0s)
[2025-11-26 07:25:00] 2025-11-26 12:24:05,578 | INFO     | monitor loop #1791: job 0:6897507459 is in state 'finished'
[2025-11-26 07:25:00] 2025-11-26 12:24:05,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:25:00] 2025-11-26 12:24:05,841 | INFO     | time since job start (30183s) is within the limit (172800.0s)
[2025-11-26 07:25:00] 2025-11-26 12:24:07,856 | INFO     | time since job start (30185s) is within the limit (172800.0s)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,105 | INFO     | monitor loop #1792: job 0:6897507459 is in state 'finished'
[2025-11-26 07:25:00] 2025-11-26 12:24:08,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,441 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 07:25:00] 2025-11-26 12:24:08,447 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2366875000016
[2025-11-26 07:25:00] 2025-11-26 12:24:08,468 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6897507459/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,469 | INFO     | extracted standard info from prmon json
[2025-11-26 07:25:00] 2025-11-26 12:24:08,469 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:25:00] 2025-11-26 12:24:08,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:25:00] 2025-11-26 12:24:08,474 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:25:00] 2025-11-26 12:24:08,474 | INFO     | sum of square deviations: 37157478616.83599
[2025-11-26 07:25:00] 2025-11-26 12:24:08,478 | INFO     | sum of deviations: 510483351283.5949
[2025-11-26 07:25:00] 2025-11-26 12:24:08,479 | INFO     | mean x: 1764144809.4300203
[2025-11-26 07:25:00] 2025-11-26 12:24:08,479 | INFO     | mean y: 2762932.5679513183
[2025-11-26 07:25:00] 2025-11-26 12:24:08,479 | INFO     | intersect: -24233718873.798492
[2025-11-26 07:25:00] 2025-11-26 12:24:08,479 | INFO     | chi2: 21.150382379735333
[2025-11-26 07:25:00] 2025-11-26 12:24:08,480 | INFO     | sum of square deviations: 36038790437.00825
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | sum of deviations: 687285335610.5251
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | mean x: 1764144656.9549181
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | mean y: 2787037.6147540985
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | intersect: -33640704819.861374
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | chi2: 17.292038832182236
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | current chi2=17.292038832182236 (change=18.242429277542826 %)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,483 | INFO     | right removable region: 487
[2025-11-26 07:25:00] 2025-11-26 12:24:08,484 | INFO     | sum of square deviations: 36038059657.00826
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | sum of deviations: 309603383806.6926
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | mean x: 1764144961.9549181
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | mean y: 2790299.4405737706
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | intersect: -15152999300.362587
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | chi2: 16.081180938038226
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | current chi2=16.081180938038226 (change=23.96742219920348 %)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,487 | INFO     | left removable region: 10
[2025-11-26 07:25:00] 2025-11-26 12:24:08,488 | INFO     | sum of square deviations: 33655784743.18641
[2025-11-26 07:25:00] 2025-11-26 12:24:08,491 | INFO     | sum of deviations: 343894625940.4425
[2025-11-26 07:25:00] 2025-11-26 12:24:08,491 | INFO     | mean x: 1764144931.5115304
[2025-11-26 07:25:00] 2025-11-26 12:24:08,491 | INFO     | mean y: 2844532.0104821804
[2025-11-26 07:25:00] 2025-11-26 12:24:08,491 | INFO     | intersect: -18023178808.58945
[2025-11-26 07:25:00] 2025-11-26 12:24:08,491 | INFO     | chi2: 7.695891254649266
[2025-11-26 07:25:00] 2025-11-26 12:24:08,491 | INFO     | current memory leak: 10.22 B/s (using 477 data points, chi2=7.70)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | could have reported an average CPU frequency of 3800 MHz (20 samples)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | ..............................
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . Timing measurements:
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . get job = 0 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . initial setup = 6 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . payload setup = 47 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . stage-in = 0 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . payload execution = 30051 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . stage-out = 3 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | . log creation = 0 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,492 | INFO     | ..............................
[2025-11-26 07:25:00] 2025-11-26 12:24:08,964 | INFO     | 
[2025-11-26 07:25:00] 2025-11-26 12:24:08,964 | INFO     | job summary report
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | --------------------------------------------------
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | PanDA job id: 6897507459
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | task id: 47556161
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | errors: (none)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | pilot state: finished 
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | transexitcode: 0
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | exeerrorcode: 0
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | exeerrordiag: 
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | exitcode: 0
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | exitmsg: OK
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | cpuconsumptiontime: 136986 s
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | nevents: 1000
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | neventsw: 0
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | pid: 3765972
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | pgrp: 3765972
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | corecount: 8
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | event service: False
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | sizes: {0: 2284265, 11: 2284265, 22: 2284293, 28: 2284583, 32: 2284611, 30102: 2323333, 30107: 2332411, 30124: 2332601}
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | --------------------------------------------------
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | 
[2025-11-26 07:25:00] 2025-11-26 12:24:08,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 07:25:00] 2025-11-26 12:24:08,991 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:25:00] 2025-11-26 12:24:08,993 | INFO     | job 6897507459 has completed (purged errors)
[2025-11-26 07:25:00] 2025-11-26 12:24:08,993 | INFO     | overall cleanup function is called
[2025-11-26 07:25:00] 2025-11-26 12:24:10,009 | INFO     | --- collectZombieJob: --- 10, [3765972]
[2025-11-26 07:25:00] 2025-11-26 12:24:10,010 | INFO     | zombie collector waiting for pid 3765972
[2025-11-26 07:25:00] 2025-11-26 12:24:10,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:25:00] 2025-11-26 12:24:10,010 | INFO     | collected zombie processes
[2025-11-26 07:25:00] 2025-11-26 12:24:10,010 | INFO     | will attempt to kill all subprocesses of pid=3765972
[2025-11-26 07:25:00] 2025-11-26 12:24:10,525 | INFO     | process IDs to be killed: [3765972] (in reverse order)
[2025-11-26 07:25:00] 2025-11-26 12:24:10,741 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:25:00] 2025-11-26 12:24:10,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:25:00] 2025-11-26 12:24:10,771 | INFO     | did not find any defunct processes belonging to 3765972
[2025-11-26 07:25:00] 2025-11-26 12:24:10,799 | INFO     | did not find any defunct processes belonging to 3765972
[2025-11-26 07:25:00] 2025-11-26 12:24:10,803 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:25:00] 2025-11-26 12:24:10,803 | INFO     | ready for new job
[2025-11-26 07:25:00] 2025-11-26 12:24:10,803 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:25:00] 2025-11-26 12:24:10,806 | INFO     | ***************************************
[2025-11-26 07:25:00] 2025-11-26 12:24:10,806 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:25:00] 2025-11-26 12:24:10,806 | INFO     | ***************************************
[2025-11-26 07:25:00] 2025-11-26 12:24:10,806 | INFO     | 
[2025-11-26 07:25:00] 2025-11-26 12:24:10,809 | INFO     | architecture information:
[2025-11-26 07:25:00] 2025-11-26 12:24:10,810 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:25:00] 2025-11-26 12:24:10,865 | INFO     | cat /etc/os-release:
[2025-11-26 07:25:00] NAME="CentOS Linux"
[2025-11-26 07:25:00] VERSION="7 (Core)"
[2025-11-26 07:25:00] ID="centos"
[2025-11-26 07:25:00] ID_LIKE="rhel fedora"
[2025-11-26 07:25:00] VERSION_ID="7"
[2025-11-26 07:25:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:25:00] ANSI_COLOR="0;31"
[2025-11-26 07:25:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:25:00] HOME_URL="https://www.centos.org/"
[2025-11-26 07:25:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:25:00] 
[2025-11-26 07:25:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:25:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:25:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:25:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:25:00] 
[2025-11-26 07:25:00] 2025-11-26 12:24:10,865 | INFO     | ***************************************
[2025-11-26 07:25:00] 2025-11-26 12:24:11,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 07:25:00] 2025-11-26 12:24:11,398 | INFO     | sufficient remaining disk space (59914584064 B)
[2025-11-26 07:25:00] 2025-11-26 12:24:11,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:25:00] 2025-11-26 12:24:11,398 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:25:00] 2025-11-26 12:24:11,398 | INFO     | update_server=False
[2025-11-26 07:25:00] 2025-11-26 12:24:11,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:25:00] 2025-11-26 12:24:11,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:25:00] 2025-11-26 12:24:11,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:25:00] 2025-11-26 12:24:11,618 | INFO     | aborting loop
[2025-11-26 07:25:00] 2025-11-26 12:24:12,003 | INFO     | all job control threads have been joined
[2025-11-26 07:25:00] 2025-11-26 12:24:12,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:25:00] 2025-11-26 12:24:12,230 | INFO     | all data control threads have been joined
[2025-11-26 07:25:00] 2025-11-26 12:24:12,404 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:12,477 | INFO     | all payload control threads have been joined
[2025-11-26 07:25:00] 2025-11-26 12:24:12,624 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,009 | INFO     | [job] control thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,048 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,052 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,218 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,236 | INFO     | [data] control thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,474 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,483 | INFO     | [payload] control thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:25:00] 2025-11-26 12:24:13,655 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,808 | INFO     | [job] validate thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:13,858 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:14,061 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:14,572 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:15,408 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:21,837 | INFO     | job.realtimelogging is not enabled
[2025-11-26 07:25:00] 2025-11-26 12:24:22,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:25:00] 2025-11-26 12:24:41,894 | INFO     | PID=3756291 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:25:00] 2025-11-26 12:24:41,895 | INFO     | .. there are 94 such processes running
[2025-11-26 07:25:00] 2025-11-26 12:24:41,895 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:25:00] 2025-11-26 12:24:41,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:25:00] 2025-11-26 12:24:41,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:25:00] 2025-11-26 12:24:54,883 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:25:00] 2025-11-26 12:24:55,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014588192576)>', '<ExcThread(monitor, started 140014214162176)>']
[2025-11-26 07:25:00] 2025-11-26 12:24:55,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:25:00] 2025-11-26 12:24:55,976 | INFO     | [monitor] control thread has ended
[2025-11-26 07:25:00] 2025-11-26 12:25:00,240 | INFO     | all workflow threads have been joined
[2025-11-26 07:25:00] 2025-11-26 12:25:00,242 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:25:00] 2025-11-26 12:25:00,242 | INFO     | traces error code: 0
[2025-11-26 07:25:00] 2025-11-26 12:25:00,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:25:00] 2025-11-26 12:25:00,415 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:25:00] 2025-11-26 12:25:00,425 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:25:00] 2025-11-26 12:25:00,434 [wrapper] pilotpid: 3756291
[2025-11-26 07:25:00] 2025-11-26 12:25:00,444 [wrapper] Pilot exit status: 0
[2025-11-26 07:25:00] 2025-11-26 12:25:00,509 [wrapper] pandaids: 6897507459
[2025-11-26 07:25:00] 2025-11-26 12:25:00,664 [wrapper] cleanup supervisor_pilot 4028401 3756292
[2025-11-26 07:25:00] 2025-11-26 12:25:00,692 [wrapper] Test setup, not cleaning
[2025-11-26 07:25:00] 2025-11-26 12:25:00,694 [wrapper] apfmon messages muted
[2025-11-26 07:25:00] 2025-11-26 12:25:00,696 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:25:00] 2025-11-26 12:25:00,698 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:25:00]  *** Error codes and diagnostics ***
[2025-11-26 07:25:01]     "exeErrorCode": 0,
[2025-11-26 07:25:01]     "exeErrorDiag": "",
[2025-11-26 07:25:01]     "pilotErrorCode": 0,
[2025-11-26 07:25:01]     "pilotErrorDiag": "",
[2025-11-26 07:25:01]  *** Listing of results directory ***
[2025-11-26 07:25:01] total 1313648
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 07:25:01] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:25:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:59 run_atlas
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:59 job.xml
[2025-11-26 07:25:01] -rw-r--r--. 2 boincer umatlas 410699902 Nov 25 22:59 EVNT.47483658._002273.pool.root.1
[2025-11-26 07:25:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:59 start_atlas.sh
[2025-11-26 07:25:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:59 shared
[2025-11-26 07:25:01] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 22:59 input.tar.gz
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:59 boinc_lockfile
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:59 pandaJob.out
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas        57 Nov 25 22:59 setup.sh.local
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas    991877 Nov 25 23:00 agis_schedconf.cvmfs.json
[2025-11-26 07:25:01] drwx------. 5 boincer umatlas      4096 Nov 25 23:01 pilot3
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas       532 Nov 26 07:11 boinc_task_state.xml
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas      7171 Nov 26 07:21 init_data.xml
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas 919492048 Nov 26 07:23 HITS.47556161._002564.pool.root.1
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas      1051 Nov 26 07:23 memory_monitor_summary.json
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas        95 Nov 26 07:23 pilot_heartbeat.json
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:23 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas   1740085 Nov 26 07:23 log.47556161._002564.job.log.tgz.1
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas      8582 Nov 26 07:24 heartbeat.json
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:24 boinc_mmap_file
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:24 wrapper_checkpoint.txt
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas      4896 Nov 26 07:25 pilotlog.txt
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas   3791151 Nov 26 07:25 log.47556161._002564.job.log.1
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas       353 Nov 26 07:25 output.list
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:25 runtime_log
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas   5550080 Nov 26 07:25 result.tar.gz
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas       659 Nov 26 07:25 ZXtMDm5aBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAfJKDm8gX6em.diag
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 07:25 runtime_log.err
[2025-11-26 07:25:01] -rw-r--r--. 1 boincer umatlas     21749 Nov 26 07:25 stderr.txt
[2025-11-26 07:25:01] HITS file was successfully produced:
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas 919492048 Nov 26 07:23 shared/HITS.pool.root.1
[2025-11-26 07:25:01]  *** Contents of shared directory: ***
[2025-11-26 07:25:01] total 1305044
[2025-11-26 07:25:01] -rw-r--r--. 2 boincer umatlas 410699902 Nov 25 22:59 ATLAS.root_0
[2025-11-26 07:25:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:59 start_atlas.sh
[2025-11-26 07:25:01] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 22:59 input.tar.gz
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas 919492048 Nov 26 07:23 HITS.pool.root.1
[2025-11-26 07:25:01] -rw-------. 1 boincer umatlas   5550080 Nov 26 07:25 result.tar.gz
07:25:02 (3748783): run_atlas exited; CPU time 137545.763783
07:25:02 (3748783): called boinc_finish(0)

</stderr_txt>
]]>

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