Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:29 (3865394): wrapper (7.7.26015): starting
00:00:29 (3865394): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:29] Arguments: --nthreads 9
[2025-11-26 00:00:29] Threads: 9
[2025-11-26 00:00:29] Checking for CVMFS
[2025-11-26 00:00:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:31] 2.13.3.0 11830 29468 365772 153309 0 576 28851510 32935936 36395 16776704 0 160654169 99.552 176480046 32977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:00:31] CVMFS is ok
[2025-11-26 00:00:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:31] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:31] Checking for apptainer binary...
[2025-11-26 00:00:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:31] Running /usr/bin/apptainer --version
[2025-11-26 00:00:31] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:31] c6-8-25-1.aglt2.org
[2025-11-26 00:00:31] apptainer works
[2025-11-26 00:00:31] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:31] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:32] Starting ATLAS job with PandaID=6897531597
[2025-11-26 00:00:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:07:52]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:07:52] 2025-11-27 08:06:59,135 | INFO     | monitor loop #5125: job 0:6897531597 is in state 'finished'
[2025-11-27 03:07:52] 2025-11-27 08:06:59,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:07:52] 2025-11-27 08:07:01,062 | INFO     | time since job start (97516s) is within the limit (172800.0s)
[2025-11-27 03:07:52] 2025-11-27 08:07:01,648 | INFO     | monitor loop #5126: job 0:6897531597 is in state 'finished'
[2025-11-27 03:07:52] 2025-11-27 08:07:01,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:07:52] 2025-11-27 08:07:03,069 | INFO     | time since job start (97518s) is within the limit (172800.0s)
[2025-11-27 03:07:52] 2025-11-27 08:07:04,153 | INFO     | monitor loop #5127: job 0:6897531597 is in state 'finished'
[2025-11-27 03:07:52] 2025-11-27 08:07:04,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:07:52] 2025-11-27 08:07:05,076 | INFO     | time since job start (97520s) is within the limit (172800.0s)
[2025-11-27 03:07:52] 2025-11-27 08:07:06,660 | INFO     | monitor loop #5128: job 0:6897531597 is in state 'finished'
[2025-11-27 03:07:52] 2025-11-27 08:07:06,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:07:52] 2025-11-27 08:07:07,084 | INFO     | time since job start (97522s) is within the limit (172800.0s)
[2025-11-27 03:07:52] 2025-11-27 08:07:09,091 | INFO     | time since job start (97524s) is within the limit (172800.0s)
[2025-11-27 03:07:52] 2025-11-27 08:07:09,092 | INFO     | 97533s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 03:07:52] 2025-11-27 08:07:09,165 | INFO     | monitor loop #5129: job 0:6897531597 is in state 'finished'
[2025-11-27 03:07:52] 2025-11-27 08:07:09,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:07:52] 2025-11-27 08:07:10,044 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 03:07:52] 2025-11-27 08:07:10,069 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2601.040968749999
[2025-11-27 03:07:52] 2025-11-27 08:07:10,129 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6897531597/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:07:52] 2025-11-27 08:07:10,132 | INFO     | extracted standard info from prmon json
[2025-11-27 03:07:52] 2025-11-27 08:07:10,132 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:07:52] 2025-11-27 08:07:10,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:07:52] 2025-11-27 08:07:10,183 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:07:52] 2025-11-27 08:07:10,185 | INFO     | sum of square deviations: 1260565426188.275
[2025-11-27 03:07:52] 2025-11-27 08:07:10,261 | INFO     | sum of deviations: 5027597591379.616
[2025-11-27 03:07:52] 2025-11-27 08:07:10,262 | INFO     | mean x: 1764182109.4786968
[2025-11-27 03:07:52] 2025-11-27 08:07:10,262 | INFO     | mean y: 2996007.6798245613
[2025-11-27 03:07:52] 2025-11-27 08:07:10,262 | INFO     | intersect: -7033209761.655123
[2025-11-27 03:07:52] 2025-11-27 08:07:10,264 | INFO     | chi2: 27.693114186605982
[2025-11-27 03:07:52] 2025-11-27 08:07:10,275 | INFO     | sum of square deviations: 1248756606854.8616
[2025-11-27 03:07:52] 2025-11-27 08:07:10,463 | INFO     | sum of deviations: 5611769174229.295
[2025-11-27 03:07:52] 2025-11-27 08:07:10,463 | INFO     | mean x: 1764181956.990572
[2025-11-27 03:07:52] 2025-11-27 08:07:10,463 | INFO     | mean y: 3003550.219987429
[2025-11-27 03:07:52] 2025-11-27 08:07:10,463 | INFO     | intersect: -7925028117.140684
[2025-11-27 03:07:52] 2025-11-27 08:07:10,474 | INFO     | chi2: 24.056612950203956
[2025-11-27 03:07:52] 2025-11-27 08:07:10,474 | INFO     | current chi2=24.056612950203956 (change=13.131427588453926 %)
[2025-11-27 03:07:52] 2025-11-27 08:07:10,474 | INFO     | right removable region: 1590
[2025-11-27 03:07:52] 2025-11-27 08:07:10,485 | INFO     | sum of square deviations: 1248752830703.8757
[2025-11-27 03:07:52] 2025-11-27 08:07:10,665 | INFO     | sum of deviations: 4364584462671.613
[2025-11-27 03:07:52] 2025-11-27 08:07:10,674 | INFO     | mean x: 1764182261.9912004
[2025-11-27 03:07:52] 2025-11-27 08:07:10,674 | INFO     | mean y: 3004566.47203017
[2025-11-27 03:07:52] 2025-11-27 08:07:10,674 | INFO     | intersect: -6163085552.152559
[2025-11-27 03:07:52] 2025-11-27 08:07:10,684 | INFO     | chi2: 23.657767316603714
[2025-11-27 03:07:52] 2025-11-27 08:07:10,685 | INFO     | current chi2=23.657767316603714 (change=14.571661543048847 %)
[2025-11-27 03:07:52] 2025-11-27 08:07:10,685 | INFO     | left removable region: 10
[2025-11-27 03:07:52] 2025-11-27 08:07:10,689 | INFO     | sum of square deviations: 1223029829472.4646
[2025-11-27 03:07:52] 2025-11-27 08:07:10,865 | INFO     | sum of deviations: 4494933006673.207
[2025-11-27 03:07:52] 2025-11-27 08:07:10,865 | INFO     | mean x: 1764182231.5183544
[2025-11-27 03:07:52] 2025-11-27 08:07:10,866 | INFO     | mean y: 3020889.958227848
[2025-11-27 03:07:52] 2025-11-27 08:07:10,866 | INFO     | intersect: -6480779219.5278
[2025-11-27 03:07:52] 2025-11-27 08:07:10,876 | INFO     | chi2: 16.552375244064933
[2025-11-27 03:07:52] 2025-11-27 08:07:10,877 | INFO     | current memory leak: 3.68 B/s (using 1580 data points, chi2=16.55)
[2025-11-27 03:07:52] 2025-11-27 08:07:10,888 | INFO     | could have reported an average CPU frequency of 2625 MHz (56 samples)
[2025-11-27 03:07:52] 2025-11-27 08:07:10,888 | INFO     | ..............................
[2025-11-27 03:07:52] 2025-11-27 08:07:10,888 | INFO     | . Timing measurements:
[2025-11-27 03:07:52] 2025-11-27 08:07:10,888 | INFO     | . get job = 0 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,888 | INFO     | . initial setup = 8 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,889 | INFO     | . payload setup = 49 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,889 | INFO     | . stage-in = 0 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,889 | INFO     | . payload execution = 97357 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,889 | INFO     | . stage-out = 9 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,889 | INFO     | . log creation = 2 s
[2025-11-27 03:07:52] 2025-11-27 08:07:10,889 | INFO     | ..............................
[2025-11-27 03:07:52] 2025-11-27 08:07:11,027 | INFO     | 
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | job summary report
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | --------------------------------------------------
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | PanDA job id: 6897531597
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | task id: 47556161
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | errors: (none)
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | pilot state: finished 
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | transexitcode: 0
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | exeerrorcode: 0
[2025-11-27 03:07:52] 2025-11-27 08:07:11,060 | INFO     | exeerrordiag: 
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | exitcode: 0
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | exitmsg: OK
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | cpuconsumptiontime: 280786 s
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | nevents: 1000
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | neventsw: 0
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | pid: 3920021
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | pgrp: 3920021
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | corecount: 9
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | event service: False
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | sizes: {0: 2283437, 1: 2284122, 2: 2284321, 13: 2284321, 24: 2284377, 35: 2284823, 97409: 2353463, 97410: 2353462, 97420: 2362568, 97455: 2362758}
[2025-11-27 03:07:52] 2025-11-27 08:07:11,061 | INFO     | --------------------------------------------------
[2025-11-27 03:07:52] 2025-11-27 08:07:11,062 | INFO     | 
[2025-11-27 03:07:52] 2025-11-27 08:07:11,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 03:07:52] 2025-11-27 08:07:11,134 | INFO     | time since job start (97526s) is within the limit (172800.0s)
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:07:52] 2025-11-27 08:07:11,240 | INFO     | job 6897531597 has completed (purged errors)
[2025-11-27 03:07:52] 2025-11-27 08:07:11,240 | INFO     | overall cleanup function is called
[2025-11-27 03:07:52] 2025-11-27 08:07:12,450 | INFO     | --- collectZombieJob: --- 10, [3920021]
[2025-11-27 03:07:52] 2025-11-27 08:07:12,453 | INFO     | zombie collector waiting for pid 3920021
[2025-11-27 03:07:52] 2025-11-27 08:07:12,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:07:52] 2025-11-27 08:07:12,453 | INFO     | collected zombie processes
[2025-11-27 03:07:52] 2025-11-27 08:07:12,453 | INFO     | will attempt to kill all subprocesses of pid=3920021
[2025-11-27 03:07:52] 2025-11-27 08:07:13,797 | INFO     | process IDs to be killed: [3920021] (in reverse order)
[2025-11-27 03:07:52] 2025-11-27 08:07:14,368 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:07:52] 2025-11-27 08:07:14,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:07:52] 2025-11-27 08:07:14,419 | INFO     | did not find any defunct processes belonging to 3920021
[2025-11-27 03:07:52] 2025-11-27 08:07:14,462 | INFO     | did not find any defunct processes belonging to 3920021
[2025-11-27 03:07:52] 2025-11-27 08:07:14,467 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:07:52] 2025-11-27 08:07:14,467 | INFO     | ready for new job
[2025-11-27 03:07:52] 2025-11-27 08:07:14,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:07:52] 2025-11-27 08:07:14,479 | INFO     | ***************************************
[2025-11-27 03:07:52] 2025-11-27 08:07:14,479 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:07:52] 2025-11-27 08:07:14,479 | INFO     | ***************************************
[2025-11-27 03:07:52] 2025-11-27 08:07:14,479 | INFO     | 
[2025-11-27 03:07:52] 2025-11-27 08:07:14,488 | INFO     | architecture information:
[2025-11-27 03:07:52] 2025-11-27 08:07:14,494 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:07:52] 2025-11-27 08:07:14,550 | INFO     | cat /etc/os-release:
[2025-11-27 03:07:52] NAME="CentOS Linux"
[2025-11-27 03:07:52] VERSION="7 (Core)"
[2025-11-27 03:07:52] ID="centos"
[2025-11-27 03:07:52] ID_LIKE="rhel fedora"
[2025-11-27 03:07:52] VERSION_ID="7"
[2025-11-27 03:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:07:52] ANSI_COLOR="0;31"
[2025-11-27 03:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:07:52] HOME_URL="https://www.centos.org/"
[2025-11-27 03:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:07:52] 
[2025-11-27 03:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:07:52] 
[2025-11-27 03:07:52] 2025-11-27 08:07:14,550 | INFO     | ***************************************
[2025-11-27 03:07:52] 2025-11-27 08:07:15,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 03:07:52] 2025-11-27 08:07:15,183 | INFO     | sufficient remaining disk space (67806167040 B)
[2025-11-27 03:07:52] 2025-11-27 08:07:15,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:07:52] 2025-11-27 08:07:15,183 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:07:52] 2025-11-27 08:07:15,183 | INFO     | update_server=False
[2025-11-27 03:07:52] 2025-11-27 08:07:15,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:07:52] 2025-11-27 08:07:15,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:07:52] 2025-11-27 08:07:15,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:07:52] 2025-11-27 08:07:15,244 | INFO     | aborting loop
[2025-11-27 03:07:52] 2025-11-27 08:07:16,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:07:52] 2025-11-27 08:07:16,112 | INFO     | all data control threads have been joined
[2025-11-27 03:07:52] 2025-11-27 08:07:16,189 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:16,270 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:16,463 | INFO     | all job control threads have been joined
[2025-11-27 03:07:52] 2025-11-27 08:07:16,605 | INFO     | all payload control threads have been joined
[2025-11-27 03:07:52] 2025-11-27 08:07:16,641 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,073 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,084 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,142 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,144 | INFO     | [data] control thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,191 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,241 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,260 | INFO     | [job] validate thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,446 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,469 | INFO     | [job] control thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,475 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,614 | INFO     | [payload] control thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:17,646 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:18,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:07:52] 2025-11-27 08:07:22,579 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:07:52] 2025-11-27 08:07:45,584 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:07:52] 2025-11-27 08:07:46,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320757495616)>', '<ExcThread(monitor, started 140320121542400)>']
[2025-11-27 03:07:52] 2025-11-27 08:07:46,371 | INFO     | PID=3877390 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:07:52] 2025-11-27 08:07:46,371 | INFO     | .. there are 53 such processes running
[2025-11-27 03:07:52] 2025-11-27 08:07:46,371 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:07:52] 2025-11-27 08:07:46,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:07:52] 2025-11-27 08:07:46,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:07:52] 2025-11-27 08:07:46,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:07:52] 2025-11-27 08:07:46,372 | INFO     | [monitor] control thread has ended
[2025-11-27 03:07:52] 2025-11-27 08:07:51,093 | INFO     | all workflow threads have been joined
[2025-11-27 03:07:52] 2025-11-27 08:07:51,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:07:52] 2025-11-27 08:07:51,094 | INFO     | traces error code: 0
[2025-11-27 03:07:52] 2025-11-27 08:07:51,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:07:52] 2025-11-27 08:07:51,403 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:07:52] 2025-11-27 08:07:51,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:07:52] 2025-11-27 08:07:51,425 [wrapper] pilotpid: 3877390
[2025-11-27 03:07:52] 2025-11-27 08:07:51,458 [wrapper] Pilot exit status: 0
[2025-11-27 03:07:52] 2025-11-27 08:07:51,532 [wrapper] pandaids: 6897531597
[2025-11-27 03:07:52] 2025-11-27 08:07:51,800 [wrapper] cleanup supervisor_pilot  272153 3877391
[2025-11-27 03:07:52] 2025-11-27 08:07:51,814 [wrapper] Test setup, not cleaning
[2025-11-27 03:07:52] 2025-11-27 08:07:51,842 [wrapper] apfmon messages muted
[2025-11-27 03:07:52] 2025-11-27 08:07:51,871 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:07:52] 2025-11-27 08:07:51,907 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:07:52]  *** Error codes and diagnostics ***
[2025-11-27 03:07:52]     "exeErrorCode": 0,
[2025-11-27 03:07:52]     "exeErrorDiag": "",
[2025-11-27 03:07:52]     "pilotErrorCode": 0,
[2025-11-27 03:07:52]     "pilotErrorDiag": "",
[2025-11-27 03:07:52]  *** Listing of results directory ***
[2025-11-27 03:07:52] total 1324600
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 03:07:52] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:07:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-27 03:07:52] -rw-r--r--. 2 boincer umatlas 409929055 Nov 26 00:00 EVNT.47483658._002305.pool.root.1
[2025-11-27 03:07:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 03:07:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-27 03:07:52] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 00:00 input.tar.gz
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:00 pandaJob.out
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas    991877 Nov 26 00:01 agis_schedconf.cvmfs.json
[2025-11-27 03:07:52] drwx------. 5 boincer umatlas      4096 Nov 26 00:01 pilot3
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:26 boinc_task_state.xml
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas 914413346 Nov 27 03:04 HITS.47556161._002882.pool.root.1
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas      6877 Nov 27 03:04 init_data.xml
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas      1059 Nov 27 03:06 memory_monitor_summary.json
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas   2640331 Nov 27 03:06 log.47556161._002882.job.log.tgz.1
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas        95 Nov 27 03:07 pilot_heartbeat.json
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas      8617 Nov 27 03:07 heartbeat.json
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:07 wrapper_checkpoint.txt
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas      4824 Nov 27 03:07 pilotlog.txt
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas  11423412 Nov 27 03:07 log.47556161._002882.job.log.1
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas       353 Nov 27 03:07 output.list
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:07 runtime_log
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas  14080000 Nov 27 03:07 result.tar.gz
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 03:07 runtime_log.err
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas       662 Nov 27 03:07 eCOMDmgaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmYMKDmNdvRgn.diag
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:07 boinc_mmap_file
[2025-11-27 03:07:52] -rw-r--r--. 1 boincer umatlas     21818 Nov 27 03:07 stderr.txt
[2025-11-27 03:07:52] HITS file was successfully produced:
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas 914413346 Nov 27 03:04 shared/HITS.pool.root.1
[2025-11-27 03:07:52]  *** Contents of shared directory: ***
[2025-11-27 03:07:52] total 1307664
[2025-11-27 03:07:52] -rw-r--r--. 2 boincer umatlas 409929055 Nov 26 00:00 ATLAS.root_0
[2025-11-27 03:07:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 03:07:52] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 00:00 input.tar.gz
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas 914413346 Nov 27 03:04 HITS.pool.root.1
[2025-11-27 03:07:52] -rw-------. 1 boincer umatlas  14080000 Nov 27 03:07 result.tar.gz
03:07:54 (3865394): run_atlas exited; CPU time 285254.965782
03:07:54 (3865394): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN