Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:31:13 (18359): wrapper (7.7.26015): starting
22:31:13 (18359): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:31:13] Arguments: --nthreads 8
[2025-11-25 22:31:13] Threads: 8
[2025-11-25 22:31:13] Checking for CVMFS
[2025-11-25 22:31:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:31:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:31:14] 2.11.4.0 5420 117127 69764 153307 3 82 13201689 18432001 1885 130560 0 82765678 99.973 4973359 31855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 22:31:14] CVMFS is ok
[2025-11-25 22:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:31:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:31:14] Further information can be found at the LHC@home message board.
[2025-11-25 22:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:31:14] Checking for apptainer binary...
[2025-11-25 22:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:31:14] Running /usr/bin/apptainer --version
[2025-11-25 22:31:14] apptainer version 1.3.2-1.el7
[2025-11-25 22:31:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:31:15] c-206-22.aglt2.org
[2025-11-25 22:31:15] apptainer works
[2025-11-25 22:31:15] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:31:15] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:31:15] Starting ATLAS job with PandaID=6897507466
[2025-11-25 22:31:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:13:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:13:30] 2025-11-26 23:12:45,288 | INFO     | monitor loop #5077: job 0:6897507466 is in state 'finished'
[2025-11-26 18:13:30] 2025-11-26 23:12:45,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,325 | INFO     | sum of deviations: 2003376311660.3433
[2025-11-26 18:13:30] 2025-11-26 23:12:45,326 | INFO     | mean x: 1764163324.1144578
[2025-11-26 18:13:30] 2025-11-26 23:12:45,326 | INFO     | mean y: 2866714.425989673
[2025-11-26 18:13:30] 2025-11-26 23:12:45,326 | INFO     | intersect: -7261620975.523012
[2025-11-26 18:13:30] 2025-11-26 23:12:45,328 | INFO     | chi2: 6.2894080436541575
[2025-11-26 18:13:30] 2025-11-26 23:12:45,329 | INFO     | sum of square deviations: 480261989969.37933
[2025-11-26 18:13:30] 2025-11-26 23:12:45,355 | INFO     | sum of deviations: 2367070444728.2246
[2025-11-26 18:13:30] 2025-11-26 23:12:45,356 | INFO     | mean x: 1764163171.617113
[2025-11-26 18:13:30] 2025-11-26 23:12:45,356 | INFO     | mean y: 2875580.0795159894
[2025-11-26 18:13:30] 2025-11-26 23:12:45,356 | INFO     | intersect: -8692167105.849312
[2025-11-26 18:13:30] 2025-11-26 23:12:45,357 | INFO     | chi2: 3.4040441004780018
[2025-11-26 18:13:30] 2025-11-26 23:12:45,357 | INFO     | current chi2=3.4040441004780018 (change=45.876558225339025 %)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,358 | INFO     | sum of square deviations: 474062686847.46936
[2025-11-26 18:13:30] 2025-11-26 23:12:45,389 | INFO     | sum of deviations: 2567719118798.0894
[2025-11-26 18:13:30] 2025-11-26 23:12:45,389 | INFO     | mean x: 1764163019.1197917
[2025-11-26 18:13:30] 2025-11-26 23:12:45,389 | INFO     | mean y: 2880515.890625
[2025-11-26 18:13:30] 2025-11-26 23:12:45,390 | INFO     | intersect: -9552554321.207079
[2025-11-26 18:13:30] 2025-11-26 23:12:45,391 | INFO     | chi2: 2.4632254772068993
[2025-11-26 18:13:30] 2025-11-26 23:12:45,391 | INFO     | current chi2=2.4632254772068993 (change=27.63826188794061 %)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,393 | INFO     | sum of square deviations: 467916966125.53973
[2025-11-26 18:13:30] 2025-11-26 23:12:45,426 | INFO     | sum of deviations: 2677753549776.629
[2025-11-26 18:13:30] 2025-11-26 23:12:45,427 | INFO     | mean x: 1764162866.6224935
[2025-11-26 18:13:30] 2025-11-26 23:12:45,427 | INFO     | mean y: 2883243.47951177
[2025-11-26 18:13:30] 2025-11-26 23:12:45,427 | INFO     | intersect: -10092910926.153296
[2025-11-26 18:13:30] 2025-11-26 23:12:45,428 | INFO     | chi2: 2.0693379588555745
[2025-11-26 18:13:30] 2025-11-26 23:12:45,428 | INFO     | current chi2=2.0693379588555745 (change=15.990721190410948 %)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,428 | INFO     | right removable region: 1146
[2025-11-26 18:13:30] 2025-11-26 23:12:45,429 | INFO     | sum of square deviations: 480261695827.8457
[2025-11-26 18:13:30] 2025-11-26 23:12:45,464 | INFO     | sum of deviations: 1733620353464.6145
[2025-11-26 18:13:30] 2025-11-26 23:12:45,465 | INFO     | mean x: 1764163476.6153846
[2025-11-26 18:13:30] 2025-11-26 23:12:45,465 | INFO     | mean y: 2873283.515989628
[2025-11-26 18:13:30] 2025-11-26 23:12:45,465 | INFO     | intersect: -6365300019.640036
[2025-11-26 18:13:30] 2025-11-26 23:12:45,467 | INFO     | chi2: 4.472851192615626
[2025-11-26 18:13:30] 2025-11-26 23:12:45,467 | INFO     | current chi2=4.472851192615626 (change=28.882795303309795 %)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,468 | INFO     | sum of square deviations: 474062098686.4129
[2025-11-26 18:13:30] 2025-11-26 23:12:45,511 | INFO     | sum of deviations: 1661332179215.4062
[2025-11-26 18:13:30] 2025-11-26 23:12:45,512 | INFO     | mean x: 1764163629.1163194
[2025-11-26 18:13:30] 2025-11-26 23:12:45,512 | INFO     | mean y: 2875061.302951389
[2025-11-26 18:13:30] 2025-11-26 23:12:45,512 | INFO     | intersect: -6179567733.7940445
[2025-11-26 18:13:30] 2025-11-26 23:12:45,514 | INFO     | chi2: 4.425929887053592
[2025-11-26 18:13:30] 2025-11-26 23:12:45,514 | INFO     | current chi2=4.425929887053592 (change=1.049024515716006 %)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,514 | INFO     | left removable region: 20
[2025-11-26 18:13:30] 2025-11-26 23:12:45,516 | INFO     | sum of square deviations: 442683765015.3438
[2025-11-26 18:13:30] 2025-11-26 23:12:45,555 | INFO     | sum of deviations: 2246949728767.887
[2025-11-26 18:13:30] 2025-11-26 23:12:45,556 | INFO     | mean x: 1764163446.125222
[2025-11-26 18:13:30] 2025-11-26 23:12:45,556 | INFO     | mean y: 2894502.4618117227
[2025-11-26 18:13:30] 2025-11-26 23:12:45,556 | INFO     | intersect: -8951548578.675112
[2025-11-26 18:13:30] 2025-11-26 23:12:45,558 | INFO     | chi2: 0.16280197402020274
[2025-11-26 18:13:30] 2025-11-26 23:12:45,558 | INFO     | current memory leak: 5.08 B/s (using 1126 data points, chi2=0.16)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,559 | INFO     | could have reported an average CPU frequency of 2626 MHz (42 samples)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,560 | INFO     | ..............................
[2025-11-26 18:13:30] 2025-11-26 23:12:45,560 | INFO     | . Timing measurements:
[2025-11-26 18:13:30] 2025-11-26 23:12:45,560 | INFO     | . get job = 0 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,560 | INFO     | . initial setup = 2 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,560 | INFO     | . payload setup = 5 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,560 | INFO     | . stage-in = 0 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,561 | INFO     | . payload execution = 70841 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,561 | INFO     | . stage-out = 3 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,561 | INFO     | . log creation = 0 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,561 | INFO     | ..............................
[2025-11-26 18:13:30] 2025-11-26 23:12:45,811 | INFO     | 
[2025-11-26 18:13:30] 2025-11-26 23:12:45,811 | INFO     | job summary report
[2025-11-26 18:13:30] 2025-11-26 23:12:45,811 | INFO     | --------------------------------------------------
[2025-11-26 18:13:30] 2025-11-26 23:12:45,811 | INFO     | PanDA job id: 6897507466
[2025-11-26 18:13:30] 2025-11-26 23:12:45,811 | INFO     | task id: 47556161
[2025-11-26 18:13:30] 2025-11-26 23:12:45,812 | INFO     | errors: (none)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,812 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:13:30] 2025-11-26 23:12:45,812 | INFO     | pilot state: finished 
[2025-11-26 18:13:30] 2025-11-26 23:12:45,812 | INFO     | transexitcode: 0
[2025-11-26 18:13:30] 2025-11-26 23:12:45,812 | INFO     | exeerrorcode: 0
[2025-11-26 18:13:30] 2025-11-26 23:12:45,813 | INFO     | exeerrordiag: 
[2025-11-26 18:13:30] 2025-11-26 23:12:45,813 | INFO     | exitcode: 0
[2025-11-26 18:13:30] 2025-11-26 23:12:45,813 | INFO     | exitmsg: OK
[2025-11-26 18:13:30] 2025-11-26 23:12:45,813 | INFO     | cpuconsumptiontime: 545805 s
[2025-11-26 18:13:30] 2025-11-26 23:12:45,813 | INFO     | nevents: 1000
[2025-11-26 18:13:30] 2025-11-26 23:12:45,813 | INFO     | neventsw: 0
[2025-11-26 18:13:30] 2025-11-26 23:12:45,814 | INFO     | pid: 28597
[2025-11-26 18:13:30] 2025-11-26 23:12:45,814 | INFO     | pgrp: 28597
[2025-11-26 18:13:30] 2025-11-26 23:12:45,814 | INFO     | corecount: 8
[2025-11-26 18:13:30] 2025-11-26 23:12:45,814 | INFO     | event service: False
[2025-11-26 18:13:30] 2025-11-26 23:12:45,814 | INFO     | sizes: {0: 2284088, 1: 2284287, 4: 2284549, 12: 2284577, 70850: 2341484, 70855: 2350478, 70857: 2350662, 70863: 2350908}
[2025-11-26 18:13:30] 2025-11-26 23:12:45,814 | INFO     | --------------------------------------------------
[2025-11-26 18:13:30] 2025-11-26 23:12:45,815 | INFO     | 
[2025-11-26 18:13:30] 2025-11-26 23:12:45,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 18:13:30] 2025-11-26 23:12:45,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:13:30] 2025-11-26 23:12:45,839 | INFO     | job 6897507466 has completed (purged errors)
[2025-11-26 18:13:30] 2025-11-26 23:12:45,839 | INFO     | overall cleanup function is called
[2025-11-26 18:13:30] 2025-11-26 23:12:46,855 | INFO     | --- collectZombieJob: --- 10, [28597]
[2025-11-26 18:13:30] 2025-11-26 23:12:46,856 | INFO     | zombie collector waiting for pid 28597
[2025-11-26 18:13:30] 2025-11-26 23:12:46,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:13:30] 2025-11-26 23:12:46,856 | INFO     | collected zombie processes
[2025-11-26 18:13:30] 2025-11-26 23:12:46,856 | INFO     | will attempt to kill all subprocesses of pid=28597
[2025-11-26 18:13:30] 2025-11-26 23:12:47,019 | INFO     | process IDs to be killed: [28597] (in reverse order)
[2025-11-26 18:13:30] 2025-11-26 23:12:47,081 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:13:30] 2025-11-26 23:12:47,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:13:30] 2025-11-26 23:12:47,084 | INFO     | did not find any defunct processes belonging to 28597
[2025-11-26 18:13:30] 2025-11-26 23:12:47,087 | INFO     | did not find any defunct processes belonging to 28597
[2025-11-26 18:13:30] 2025-11-26 23:12:47,088 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:13:30] 2025-11-26 23:12:47,088 | INFO     | ready for new job
[2025-11-26 18:13:30] 2025-11-26 23:12:47,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:13:30] 2025-11-26 23:12:47,092 | INFO     | ***************************************
[2025-11-26 18:13:30] 2025-11-26 23:12:47,092 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:13:30] 2025-11-26 23:12:47,092 | INFO     | ***************************************
[2025-11-26 18:13:30] 2025-11-26 23:12:47,092 | INFO     | 
[2025-11-26 18:13:30] 2025-11-26 23:12:47,093 | INFO     | architecture information:
[2025-11-26 18:13:30] 2025-11-26 23:12:47,093 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:13:30] 2025-11-26 23:12:47,106 | INFO     | cat /etc/os-release:
[2025-11-26 18:13:30] NAME="CentOS Linux"
[2025-11-26 18:13:30] VERSION="7 (Core)"
[2025-11-26 18:13:30] ID="centos"
[2025-11-26 18:13:30] ID_LIKE="rhel fedora"
[2025-11-26 18:13:30] VERSION_ID="7"
[2025-11-26 18:13:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:13:30] ANSI_COLOR="0;31"
[2025-11-26 18:13:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:13:30] HOME_URL="https://www.centos.org/"
[2025-11-26 18:13:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:13:30] 
[2025-11-26 18:13:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:13:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:13:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:13:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:13:30] 
[2025-11-26 18:13:30] 2025-11-26 23:12:47,107 | INFO     | ***************************************
[2025-11-26 18:13:30] 2025-11-26 23:12:47,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 18:13:30] 2025-11-26 23:12:47,624 | INFO     | sufficient remaining disk space (25688014848 B)
[2025-11-26 18:13:30] 2025-11-26 23:12:47,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:13:30] 2025-11-26 23:12:47,625 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:13:30] 2025-11-26 23:12:47,625 | INFO     | update_server=False
[2025-11-26 18:13:30] 2025-11-26 23:12:47,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:13:30] 2025-11-26 23:12:47,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:13:30] 2025-11-26 23:12:47,789 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 18:13:30] 2025-11-26 23:12:47,789 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 18:13:30] 2025-11-26 23:12:47,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:13:30] 2025-11-26 23:12:47,789 | INFO     | will abort loop
[2025-11-26 18:13:30] 2025-11-26 23:12:47,838 | INFO     | all data control threads have been joined
[2025-11-26 18:13:30] 2025-11-26 23:12:47,846 | INFO     | all payload control threads have been joined
[2025-11-26 18:13:30] 2025-11-26 23:12:48,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:13:30] 2025-11-26 23:12:48,632 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,633 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,795 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,797 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,797 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,844 | INFO     | all job control threads have been joined
[2025-11-26 18:13:30] 2025-11-26 23:12:48,844 | INFO     | [data] control thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,853 | INFO     | [payload] control thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:48,970 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:49,016 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:49,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:49,184 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:49,825 | INFO     | [job] validate thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:49,849 | INFO     | [job] control thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:49,944 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:50,058 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:12:50,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:13:30] 2025-11-26 23:12:54,564 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:13:30] 2025-11-26 23:13:18,176 | INFO     | PID=22028 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 18:13:30] 2025-11-26 23:13:18,177 | INFO     | .. there are 3 such processes running
[2025-11-26 18:13:30] 2025-11-26 23:13:18,177 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:13:30] 2025-11-26 23:13:18,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:13:30] 2025-11-26 23:13:18,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:13:30] 2025-11-26 23:13:23,945 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:13:30] 2025-11-26 23:13:24,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336601540416)>', '<ExcThread(monitor, started 140336009557760)>']
[2025-11-26 18:13:30] 2025-11-26 23:13:25,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:13:30] 2025-11-26 23:13:25,210 | INFO     | [monitor] control thread has ended
[2025-11-26 18:13:30] 2025-11-26 23:13:29,829 | INFO     | all workflow threads have been joined
[2025-11-26 18:13:30] 2025-11-26 23:13:29,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:13:30] 2025-11-26 23:13:29,829 | INFO     | traces error code: 0
[2025-11-26 18:13:30] 2025-11-26 23:13:29,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:13:30] 2025-11-26 23:13:29,936 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:13:30] 2025-11-26 23:13:29,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:13:30] 2025-11-26 23:13:29,939 [wrapper] pilotpid: 22028
[2025-11-26 18:13:30] 2025-11-26 23:13:29,941 [wrapper] Pilot exit status: 0
[2025-11-26 18:13:30] 2025-11-26 23:13:29,949 [wrapper] pandaids: 6897507466
[2025-11-26 18:13:30] 2025-11-26 23:13:29,989 [wrapper] cleanup supervisor_pilot 16635 22029
[2025-11-26 18:13:30] 2025-11-26 23:13:29,991 [wrapper] Test setup, not cleaning
[2025-11-26 18:13:30] 2025-11-26 23:13:29,993 [wrapper] apfmon messages muted
[2025-11-26 18:13:30] 2025-11-26 23:13:29,995 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:13:30] 2025-11-26 23:13:29,997 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:13:30]  *** Error codes and diagnostics ***
[2025-11-26 18:13:30]     "exeErrorCode": 0,
[2025-11-26 18:13:30]     "exeErrorDiag": "",
[2025-11-26 18:13:30]     "pilotErrorCode": 0,
[2025-11-26 18:13:30]     "pilotErrorDiag": "",
[2025-11-26 18:13:30]  *** Listing of results directory ***
[2025-11-26 18:13:30] total 1330076
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 18:13:30] -rwx------ 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas       100 Nov 25 22:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:13:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 22:31 run_atlas
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas       105 Nov 25 22:31 job.xml
[2025-11-26 18:13:30] -rw-r--r-- 2 boincer umatlas 407283169 Nov 25 22:31 EVNT.47483658._002274.pool.root.1
[2025-11-26 18:13:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 22:31 start_atlas.sh
[2025-11-26 18:13:30] drwxrwx--x 2 boincer umatlas      4096 Nov 25 22:31 shared
[2025-11-26 18:13:30] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 22:31 input.tar.gz
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas         0 Nov 25 22:31 boinc_lockfile
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 22:31 pandaJob.out
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas        57 Nov 25 22:31 setup.sh.local
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas    991877 Nov 25 22:31 agis_schedconf.cvmfs.json
[2025-11-26 18:13:30] drwx------ 5 boincer umatlas      4096 Nov 25 22:31 pilot3
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas       532 Nov 26 17:56 boinc_task_state.xml
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas      5952 Nov 26 18:11 init_data.xml
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas 926505447 Nov 26 18:11 HITS.47556161._002571.pool.root.1
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas      1067 Nov 26 18:12 memory_monitor_summary.json
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas   1516240 Nov 26 18:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas   2325749 Nov 26 18:12 log.47556161._002571.job.log.tgz.1
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas        95 Nov 26 18:12 pilot_heartbeat.json
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas      8656 Nov 26 18:12 heartbeat.json
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 18:13 boinc_mmap_file
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas        29 Nov 26 18:13 wrapper_checkpoint.txt
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas      5007 Nov 26 18:13 pilotlog.txt
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas   9814989 Nov 26 18:13 log.47556161._002571.job.log.1
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas       353 Nov 26 18:13 output.list
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas       620 Nov 26 18:13 runtime_log
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas  12165120 Nov 26 18:13 result.tar.gz
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 18:13 runtime_log.err
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas       668 Nov 26 18:13 9eFLDmgaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8XMKDmIzUcbn.diag
[2025-11-26 18:13:30] -rw-r--r-- 1 boincer umatlas     21193 Nov 26 18:13 stderr.txt
[2025-11-26 18:13:30] HITS file was successfully produced:
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas 926505447 Nov 26 18:11 shared/HITS.pool.root.1
[2025-11-26 18:13:30]  *** Contents of shared directory: ***
[2025-11-26 18:13:30] total 1315016
[2025-11-26 18:13:30] -rw-r--r-- 2 boincer umatlas 407283169 Nov 25 22:31 ATLAS.root_0
[2025-11-26 18:13:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 22:31 start_atlas.sh
[2025-11-26 18:13:30] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 22:31 input.tar.gz
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas 926505447 Nov 26 18:11 HITS.pool.root.1
[2025-11-26 18:13:30] -rw------- 1 boincer umatlas  12165120 Nov 26 18:13 result.tar.gz
18:13:31 (18359): run_atlas exited; CPU time 544677.062825
18:13:31 (18359): called boinc_finish(0)

</stderr_txt>
]]>

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