Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:44 (607600): wrapper (7.7.26015): starting
22:22:44 (607600): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:22:44] Arguments: --nthreads 8
[2025-11-25 22:22:44] Threads: 8
[2025-11-25 22:22:44] Checking for CVMFS
[2025-11-25 22:22:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:22:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:22:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:22:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:22:47] 2.13.3.0 12348 29505 380188 153307 3 320 16598300 32935936 36188 16776704 0 146797284 99.489 188659286 35491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:22:47] CVMFS is ok
[2025-11-25 22:22:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:22:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:22:47] Further information can be found at the LHC@home message board.
[2025-11-25 22:22:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:22:47] Checking for apptainer binary...
[2025-11-25 22:22:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:22:47] Running /usr/bin/apptainer --version
[2025-11-25 22:22:47] apptainer version 1.4.4-1.el9
[2025-11-25 22:22:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:22:47] c6-12-27-2.aglt2.org
[2025-11-25 22:22:47] apptainer works
[2025-11-25 22:22:47] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:22:47] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:22:47] Starting ATLAS job with PandaID=6897488851
[2025-11-25 22:22:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:53:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:53:39] 2025-11-27 03:53:02,669 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:53:39] 2025-11-27 03:53:02,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:53:39] 2025-11-27 03:53:02,809 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:53:39] 2025-11-27 03:53:02,826 | INFO     | sum of square deviations: 931697042801.6704
[2025-11-26 22:53:39] 2025-11-27 03:53:02,866 | INFO     | sum of deviations: 4519474563510.701
[2025-11-26 22:53:39] 2025-11-27 03:53:02,867 | INFO     | mean x: 1764171554.8059597
[2025-11-26 22:53:39] 2025-11-27 03:53:02,867 | INFO     | mean y: 2898199.35966736
[2025-11-26 22:53:39] 2025-11-27 03:53:02,867 | INFO     | intersect: -8554742429.872096
[2025-11-26 22:53:39] 2025-11-27 03:53:02,869 | INFO     | chi2: 13.218561317033474
[2025-11-26 22:53:39] 2025-11-27 03:53:02,871 | INFO     | sum of square deviations: 922046738604.664
[2025-11-26 22:53:39] 2025-11-27 03:53:02,910 | INFO     | sum of deviations: 4964636848442.586
[2025-11-26 22:53:39] 2025-11-27 03:53:02,910 | INFO     | mean x: 1764171402.3157163
[2025-11-26 22:53:39] 2025-11-27 03:53:02,910 | INFO     | mean y: 2905231.0757997218
[2025-11-26 22:53:39] 2025-11-27 03:53:02,910 | INFO     | intersect: -9496038785.75295
[2025-11-26 22:53:39] 2025-11-27 03:53:02,912 | INFO     | chi2: 10.53107649580177
[2025-11-26 22:53:39] 2025-11-27 03:53:02,912 | INFO     | current chi2=10.53107649580177 (change=20.33114464407412 %)
[2025-11-26 22:53:39] 2025-11-27 03:53:02,912 | INFO     | right removable region: 1437
[2025-11-26 22:53:39] 2025-11-27 03:53:02,914 | INFO     | sum of square deviations: 922044268714.664
[2025-11-26 22:53:39] 2025-11-27 03:53:02,952 | INFO     | sum of deviations: 3926709687162.6475
[2025-11-26 22:53:39] 2025-11-27 03:53:02,952 | INFO     | mean x: 1764171707.3157163
[2025-11-26 22:53:39] 2025-11-27 03:53:02,952 | INFO     | mean y: 2907563.6703755218
[2025-11-26 22:53:39] 2025-11-27 03:53:02,952 | INFO     | intersect: -7510170027.05281
[2025-11-26 22:53:39] 2025-11-27 03:53:02,954 | INFO     | chi2: 8.797845556369934
[2025-11-26 22:53:39] 2025-11-27 03:53:02,954 | INFO     | current chi2=8.797845556369934 (change=33.44324434889139 %)
[2025-11-26 22:53:39] 2025-11-27 03:53:02,956 | INFO     | sum of square deviations: 912458379602.3857
[2025-11-26 22:53:39] 2025-11-27 03:53:02,996 | INFO     | sum of deviations: 3417908966448.108
[2025-11-26 22:53:39] 2025-11-27 03:53:02,996 | INFO     | mean x: 1764171859.8255408
[2025-11-26 22:53:39] 2025-11-27 03:53:02,996 | INFO     | mean y: 2915659.3684577807
[2025-11-26 22:53:39] 2025-11-27 03:53:02,996 | INFO     | intersect: -6605362540.323999
[2025-11-26 22:53:39] 2025-11-27 03:53:02,998 | INFO     | chi2: 5.648022933648425
[2025-11-26 22:53:39] 2025-11-27 03:53:02,998 | INFO     | current chi2=5.648022933648425 (change=35.80220410258204 %)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,000 | INFO     | sum of square deviations: 902939142902.3268
[2025-11-26 22:53:39] 2025-11-27 03:53:03,037 | INFO     | sum of deviations: 2999620978832.637
[2025-11-26 22:53:39] 2025-11-27 03:53:03,038 | INFO     | mean x: 1764172012.3354342
[2025-11-26 22:53:39] 2025-11-27 03:53:03,038 | INFO     | mean y: 2922358.6771708685
[2025-11-26 22:53:39] 2025-11-27 03:53:03,038 | INFO     | intersect: -5857768718.975214
[2025-11-26 22:53:39] 2025-11-27 03:53:03,039 | INFO     | chi2: 3.556340387667245
[2025-11-26 22:53:39] 2025-11-27 03:53:03,040 | INFO     | current chi2=3.556340387667245 (change=37.03388903610607 %)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,041 | INFO     | sum of square deviations: 893486848602.1079
[2025-11-26 22:53:39] 2025-11-27 03:53:03,078 | INFO     | sum of deviations: 2850139771558.2837
[2025-11-26 22:53:39] 2025-11-27 03:53:03,078 | INFO     | mean x: 1764172164.8411806
[2025-11-26 22:53:39] 2025-11-27 03:53:03,078 | INFO     | mean y: 2924768.4968376667
[2025-11-26 22:53:39] 2025-11-27 03:53:03,078 | INFO     | intersect: -5624620011.548471
[2025-11-26 22:53:39] 2025-11-27 03:53:03,080 | INFO     | chi2: 3.2827940661607
[2025-11-26 22:53:39] 2025-11-27 03:53:03,080 | INFO     | current chi2=3.2827940661607 (change=7.691792452014856 %)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,080 | INFO     | left removable region: 40
[2025-11-26 22:53:39] 2025-11-27 03:53:03,082 | INFO     | sum of square deviations: 845399194419.0785
[2025-11-26 22:53:39] 2025-11-27 03:53:03,118 | INFO     | sum of deviations: 3071539953448.222
[2025-11-26 22:53:39] 2025-11-27 03:53:03,118 | INFO     | mean x: 1764172591.8747315
[2025-11-26 22:53:39] 2025-11-27 03:53:03,118 | INFO     | mean y: 2937032.2584108803
[2025-11-26 22:53:39] 2025-11-27 03:53:03,118 | INFO     | intersect: -6406729118.94375
[2025-11-26 22:53:39] 2025-11-27 03:53:03,120 | INFO     | chi2: 0.33175114390317784
[2025-11-26 22:53:39] 2025-11-27 03:53:03,120 | INFO     | current memory leak: 3.63 B/s (using 1397 data points, chi2=0.33)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,123 | INFO     | could have reported an average CPU frequency of 2702 MHz (51 samples)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,123 | INFO     | ..............................
[2025-11-26 22:53:39] 2025-11-27 03:53:03,123 | INFO     | . Timing measurements:
[2025-11-26 22:53:39] 2025-11-27 03:53:03,123 | INFO     | . get job = 0 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,123 | INFO     | . initial setup = 5 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,124 | INFO     | . payload setup = 47 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,124 | INFO     | . stage-in = 0 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,124 | INFO     | . payload execution = 88021 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,124 | INFO     | . stage-out = 5 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,124 | INFO     | . log creation = 1 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,124 | INFO     | ..............................
[2025-11-26 22:53:39] 2025-11-27 03:53:03,232 | INFO     | 
[2025-11-26 22:53:39] 2025-11-27 03:53:03,257 | INFO     | job summary report
[2025-11-26 22:53:39] 2025-11-27 03:53:03,257 | INFO     | --------------------------------------------------
[2025-11-26 22:53:39] 2025-11-27 03:53:03,257 | INFO     | PanDA job id: 6897488851
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | task id: 47556161
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | errors: (none)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | pilot state: finished 
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | transexitcode: 0
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | exeerrorcode: 0
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | exeerrordiag: 
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | exitcode: 0
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | exitmsg: OK
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | cpuconsumptiontime: 261245 s
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | nevents: 1000
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | neventsw: 0
[2025-11-26 22:53:39] 2025-11-27 03:53:03,258 | INFO     | pid: 624055
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | pgrp: 624055
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | corecount: 8
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | event service: False
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | sizes: {0: 2284038, 1: 2284094, 2: 2284321, 3: 2284349, 14: 2284349, 25: 2284377, 32: 2284795, 36: 2284823, 88072: 2348679, 88073: 2348678, 88078: 2358064, 88088: 
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | --------------------------------------------------
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | 
[2025-11-26 22:53:39] 2025-11-27 03:53:03,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 22:53:39] 2025-11-27 03:53:03,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,302 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:53:39] 2025-11-27 03:53:03,303 | INFO     | job 6897488851 has completed (purged errors)
[2025-11-26 22:53:39] 2025-11-27 03:53:03,303 | INFO     | overall cleanup function is called
[2025-11-26 22:53:39] 2025-11-27 03:53:04,323 | INFO     | --- collectZombieJob: --- 10, [624055]
[2025-11-26 22:53:39] 2025-11-27 03:53:04,323 | INFO     | zombie collector waiting for pid 624055
[2025-11-26 22:53:39] 2025-11-27 03:53:04,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:53:39] 2025-11-27 03:53:04,323 | INFO     | collected zombie processes
[2025-11-26 22:53:39] 2025-11-27 03:53:04,323 | INFO     | will attempt to kill all subprocesses of pid=624055
[2025-11-26 22:53:39] 2025-11-27 03:53:05,130 | INFO     | process IDs to be killed: [624055] (in reverse order)
[2025-11-26 22:53:39] 2025-11-27 03:53:05,313 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:53:39] 2025-11-27 03:53:05,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:53:39] 2025-11-27 03:53:05,334 | INFO     | did not find any defunct processes belonging to 624055
[2025-11-26 22:53:39] 2025-11-27 03:53:05,354 | INFO     | did not find any defunct processes belonging to 624055
[2025-11-26 22:53:39] 2025-11-27 03:53:05,355 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:53:39] 2025-11-27 03:53:05,356 | INFO     | ready for new job
[2025-11-26 22:53:39] 2025-11-27 03:53:05,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:53:39] 2025-11-27 03:53:05,389 | INFO     | ***************************************
[2025-11-26 22:53:39] 2025-11-27 03:53:05,390 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:53:39] 2025-11-27 03:53:05,390 | INFO     | ***************************************
[2025-11-26 22:53:39] 2025-11-27 03:53:05,390 | INFO     | 
[2025-11-26 22:53:39] 2025-11-27 03:53:05,444 | INFO     | architecture information:
[2025-11-26 22:53:39] 2025-11-27 03:53:05,451 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:53:39] 2025-11-27 03:53:05,474 | INFO     | cat /etc/os-release:
[2025-11-26 22:53:39] NAME="CentOS Linux"
[2025-11-26 22:53:39] VERSION="7 (Core)"
[2025-11-26 22:53:39] ID="centos"
[2025-11-26 22:53:39] ID_LIKE="rhel fedora"
[2025-11-26 22:53:39] VERSION_ID="7"
[2025-11-26 22:53:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:53:39] ANSI_COLOR="0;31"
[2025-11-26 22:53:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:53:39] HOME_URL="https://www.centos.org/"
[2025-11-26 22:53:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:53:39] 
[2025-11-26 22:53:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:53:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:53:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:53:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:53:39] 
[2025-11-26 22:53:39] 2025-11-27 03:53:05,474 | INFO     | ***************************************
[2025-11-26 22:53:39] 2025-11-27 03:53:05,978 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 22:53:39] 2025-11-27 03:53:06,004 | INFO     | sufficient remaining disk space (86061875200 B)
[2025-11-26 22:53:39] 2025-11-27 03:53:06,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:53:39] 2025-11-27 03:53:06,005 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:53:39] 2025-11-27 03:53:06,005 | INFO     | update_server=False
[2025-11-26 22:53:39] 2025-11-27 03:53:06,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:53:39] 2025-11-27 03:53:06,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:53:39] 2025-11-27 03:53:06,006 | INFO     | aborting loop
[2025-11-26 22:53:39] 2025-11-27 03:53:06,083 | INFO     | all data control threads have been joined
[2025-11-26 22:53:39] 2025-11-27 03:53:06,396 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:53:39] 2025-11-27 03:53:07,011 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,018 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,092 | INFO     | [data] control thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,319 | INFO     | all job control threads have been joined
[2025-11-26 22:53:39] 2025-11-27 03:53:07,430 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,460 | INFO     | all payload control threads have been joined
[2025-11-26 22:53:39] 2025-11-27 03:53:07,474 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,480 | INFO     | [job] validate thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,536 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:07,851 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:08,161 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:08,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:53:39] 2025-11-27 03:53:08,324 | INFO     | [job] control thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:08,466 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:08,466 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:08,488 | INFO     | [payload] control thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:08,574 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:53:39] 2025-11-27 03:53:09,251 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:12,585 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:53:39] 2025-11-27 03:53:33,525 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:53:39] 2025-11-27 03:53:34,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924137973568)>', '<ExcThread(monitor, started 139923516548864)>']
[2025-11-26 22:53:39] 2025-11-27 03:53:36,290 | INFO     | PID=613375 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 22:53:39] 2025-11-27 03:53:36,290 | INFO     | .. there are 46 such processes running
[2025-11-26 22:53:39] 2025-11-27 03:53:36,291 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:53:39] 2025-11-27 03:53:36,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:53:39] 2025-11-27 03:53:36,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:53:39] 2025-11-27 03:53:36,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:53:39] 2025-11-27 03:53:36,291 | INFO     | [monitor] control thread has ended
[2025-11-26 22:53:39] 2025-11-27 03:53:39,044 | INFO     | all workflow threads have been joined
[2025-11-26 22:53:39] 2025-11-27 03:53:39,044 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:53:39] 2025-11-27 03:53:39,045 | INFO     | traces error code: 0
[2025-11-26 22:53:39] 2025-11-27 03:53:39,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:53:39] 2025-11-27 03:53:39,373 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:53:39] 2025-11-27 03:53:39,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:53:39] 2025-11-27 03:53:39,378 [wrapper] pilotpid: 613375
[2025-11-26 22:53:39] 2025-11-27 03:53:39,381 [wrapper] Pilot exit status: 0
[2025-11-26 22:53:39] 2025-11-27 03:53:39,414 [wrapper] pandaids: 6897488851
[2025-11-26 22:53:39] 2025-11-27 03:53:39,509 [wrapper] cleanup supervisor_pilot 2785377 613376
[2025-11-26 22:53:39] 2025-11-27 03:53:39,517 [wrapper] Test setup, not cleaning
[2025-11-26 22:53:39] 2025-11-27 03:53:39,537 [wrapper] apfmon messages muted
[2025-11-26 22:53:39] 2025-11-27 03:53:39,544 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:53:39] 2025-11-27 03:53:39,547 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:53:39]  *** Error codes and diagnostics ***
[2025-11-26 22:53:39]     "exeErrorCode": 0,
[2025-11-26 22:53:39]     "exeErrorDiag": "",
[2025-11-26 22:53:39]     "pilotErrorCode": 0,
[2025-11-26 22:53:39]     "pilotErrorDiag": "",
[2025-11-26 22:53:39]  *** Listing of results directory ***
[2025-11-26 22:53:39] total 1335804
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 22:53:39] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:53:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:22 run_atlas
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:22 job.xml
[2025-11-26 22:53:39] -rw-r--r--. 2 boincer umatlas 407810278 Nov 25 22:22 EVNT.47483658._002266.pool.root.1
[2025-11-26 22:53:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:22 start_atlas.sh
[2025-11-26 22:53:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:22 shared
[2025-11-26 22:53:39] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 22:22 input.tar.gz
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:22 boinc_lockfile
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:22 pandaJob.out
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas        57 Nov 25 22:22 setup.sh.local
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas    991877 Nov 25 22:23 agis_schedconf.cvmfs.json
[2025-11-26 22:53:39] drwx------. 5 boincer umatlas      4096 Nov 25 22:23 pilot3
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:44 boinc_task_state.xml
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas      6880 Nov 26 22:49 init_data.xml
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas 931548794 Nov 26 22:52 HITS.47556161._002494.pool.root.1
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas      1059 Nov 26 22:52 memory_monitor_summary.json
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas   2390088 Nov 26 22:52 log.47556161._002494.job.log.tgz.1
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas      8622 Nov 26 22:53 heartbeat.json
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas        95 Nov 26 22:53 pilot_heartbeat.json
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:53 boinc_mmap_file
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas      4823 Nov 26 22:53 pilotlog.txt
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:53 wrapper_checkpoint.txt
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas   9902160 Nov 26 22:53 log.47556161._002494.job.log.1
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas       353 Nov 26 22:53 output.list
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:53 runtime_log
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas  12308480 Nov 26 22:53 result.tar.gz
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 22:53 runtime_log.err
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas       662 Nov 26 22:53 ctGLDmtaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAZMKDmGDKO0n.diag
[2025-11-26 22:53:39] -rw-r--r--. 1 boincer umatlas     21151 Nov 26 22:53 stderr.txt
[2025-11-26 22:53:39] HITS file was successfully produced:
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas 931548794 Nov 26 22:52 shared/HITS.pool.root.1
[2025-11-26 22:53:39]  *** Contents of shared directory: ***
[2025-11-26 22:53:39] total 1320596
[2025-11-26 22:53:39] -rw-r--r--. 2 boincer umatlas 407810278 Nov 25 22:22 ATLAS.root_0
[2025-11-26 22:53:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:22 start_atlas.sh
[2025-11-26 22:53:39] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 22:22 input.tar.gz
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas 931548794 Nov 26 22:52 HITS.pool.root.1
[2025-11-26 22:53:39] -rw-------. 1 boincer umatlas  12308480 Nov 26 22:53 result.tar.gz
22:53:41 (607600): run_atlas exited; CPU time 264726.845788
22:53:41 (607600): called boinc_finish(0)

</stderr_txt>
]]>

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