Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:15 (2734491): wrapper (7.7.26015): starting
23:30:15 (2734491): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:30:15] Arguments: --nthreads 8
[2025-11-25 23:30:15] Threads: 8
[2025-11-25 23:30:15] Checking for CVMFS
[2025-11-25 23:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:30:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:30:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:30:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:30:17] 2.13.3.0 15551 27870 350348 153309 3 323 24243734 32935937 27212 16776704 0 51169315 99.566 60752477 39925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:30:17] CVMFS is ok
[2025-11-25 23:30:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:30:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:30:17] Further information can be found at the LHC@home message board.
[2025-11-25 23:30:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:30:17] Checking for apptainer binary...
[2025-11-25 23:30:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:30:17] Running /usr/bin/apptainer --version
[2025-11-25 23:30:17] apptainer version 1.4.4-1.el9
[2025-11-25 23:30:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:30:18] c6-5-7-3.aglt2.org
[2025-11-25 23:30:18] apptainer works
[2025-11-25 23:30:18] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:30:18] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:30:18] Starting ATLAS job with PandaID=6897531736
[2025-11-25 23:30:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:23:05]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:23:05] 2025-11-27 03:22:24,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:23:05] 2025-11-27 03:22:24,678 | INFO     | time since job start (82266s) is within the limit (172800.0s)
[2025-11-26 22:23:05] 2025-11-27 03:22:26,609 | INFO     | monitor loop #5285: job 0:6897531736 is in state 'finished'
[2025-11-26 22:23:05] 2025-11-27 03:22:26,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:23:05] 2025-11-27 03:22:26,685 | INFO     | time since job start (82268s) is within the limit (172800.0s)
[2025-11-26 22:23:05] 2025-11-27 03:22:28,534 | INFO     | PID=2738836 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:23:05] 2025-11-27 03:22:28,538 | INFO     | .. there are 38 such processes running
[2025-11-26 22:23:05] 2025-11-27 03:22:28,690 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 22:23:05] 2025-11-27 03:22:28,704 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2908.7098571428573
[2025-11-26 22:23:05] 2025-11-27 03:22:28,740 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897531736/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:23:05] 2025-11-27 03:22:28,741 | INFO     | extracted standard info from prmon json
[2025-11-26 22:23:05] 2025-11-27 03:22:28,741 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:23:05] 2025-11-27 03:22:28,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:23:05] 2025-11-27 03:22:28,796 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:23:05] 2025-11-27 03:22:28,798 | INFO     | sum of square deviations: 756143349133.1122
[2025-11-26 22:23:05] 2025-11-27 03:22:28,901 | INFO     | sum of deviations: 3958633064853.0347
[2025-11-26 22:23:05] 2025-11-27 03:22:28,901 | INFO     | mean x: 1764172632.3046062
[2025-11-26 22:23:05] 2025-11-27 03:22:28,901 | INFO     | mean y: 2911915.3803863297
[2025-11-26 22:23:05] 2025-11-27 03:22:28,901 | INFO     | intersect: -9233051242.076958
[2025-11-26 22:23:05] 2025-11-27 03:22:28,903 | INFO     | chi2: 11.946203424860208
[2025-11-26 22:23:05] 2025-11-27 03:22:28,911 | INFO     | sum of square deviations: 747748201102.362
[2025-11-26 22:23:05] 2025-11-27 03:22:28,969 | INFO     | sum of deviations: 4399067474977.621
[2025-11-26 22:23:05] 2025-11-27 03:22:28,973 | INFO     | mean x: 1764172479.8076062
[2025-11-26 22:23:05] 2025-11-27 03:22:28,973 | INFO     | mean y: 2919916.037285608
[2025-11-26 22:23:05] 2025-11-27 03:22:28,973 | INFO     | intersect: -10375859684.811077
[2025-11-26 22:23:05] 2025-11-27 03:22:28,975 | INFO     | chi2: 8.976271299762413
[2025-11-26 22:23:05] 2025-11-27 03:22:28,975 | INFO     | current chi2=8.976271299762413 (change=24.860886923433156 %)
[2025-11-26 22:23:05] 2025-11-27 03:22:28,975 | INFO     | right removable region: 1340
[2025-11-26 22:23:05] 2025-11-27 03:22:28,977 | INFO     | sum of square deviations: 747747540472.3629
[2025-11-26 22:23:05] 2025-11-27 03:22:29,045 | INFO     | sum of deviations: 3430323326501.5835
[2025-11-26 22:23:05] 2025-11-27 03:22:29,045 | INFO     | mean x: 1764172784.8076062
[2025-11-26 22:23:05] 2025-11-27 03:22:29,045 | INFO     | mean y: 2921510.393736018
[2025-11-26 22:23:05] 2025-11-27 03:22:29,046 | INFO     | intersect: -8090295421.997449
[2025-11-26 22:23:05] 2025-11-27 03:22:29,051 | INFO     | chi2: 8.116131193365225
[2025-11-26 22:23:05] 2025-11-27 03:22:29,052 | INFO     | current chi2=8.116131193365225 (change=32.06099959359935 %)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,053 | INFO     | sum of square deviations: 739414512972.1768
[2025-11-26 22:23:05] 2025-11-27 03:22:29,119 | INFO     | sum of deviations: 3183960016086.009
[2025-11-26 22:23:05] 2025-11-27 03:22:29,120 | INFO     | mean x: 1764172937.3068862
[2025-11-26 22:23:05] 2025-11-27 03:22:29,120 | INFO     | mean y: 2926014.3682634733
[2025-11-26 22:23:05] 2025-11-27 03:22:29,120 | INFO     | intersect: -7593700769.798601
[2025-11-26 22:23:05] 2025-11-27 03:22:29,122 | INFO     | chi2: 7.2116911019835515
[2025-11-26 22:23:05] 2025-11-27 03:22:29,122 | INFO     | current chi2=7.2116911019835515 (change=11.143734247679923 %)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,122 | INFO     | left removable region: 20
[2025-11-26 22:23:05] 2025-11-27 03:22:29,129 | INFO     | sum of square deviations: 713165808222.7389
[2025-11-26 22:23:05] 2025-11-27 03:22:29,146 | INFO     | monitor loop #5286: job 0:6897531736 is in state 'finished'
[2025-11-26 22:23:05] 2025-11-27 03:22:29,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,202 | INFO     | sum of deviations: 3578108582815.3516
[2025-11-26 22:23:05] 2025-11-27 03:22:29,202 | INFO     | mean x: 1764173059.3068182
[2025-11-26 22:23:05] 2025-11-27 03:22:29,202 | INFO     | mean y: 2938823.6954545453
[2025-11-26 22:23:05] 2025-11-27 03:22:29,203 | INFO     | intersect: -8848302629.969172
[2025-11-26 22:23:05] 2025-11-27 03:22:29,211 | INFO     | chi2: 3.388146601929327
[2025-11-26 22:23:05] 2025-11-27 03:22:29,212 | INFO     | current memory leak: 5.02 B/s (using 1320 data points, chi2=3.39)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,213 | INFO     | could have reported an average CPU frequency of 3027 MHz (48 samples)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,213 | INFO     | ..............................
[2025-11-26 22:23:05] 2025-11-27 03:22:29,213 | INFO     | . Timing measurements:
[2025-11-26 22:23:05] 2025-11-27 03:22:29,213 | INFO     | . get job = 0 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,213 | INFO     | . initial setup = 4 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,214 | INFO     | . payload setup = 40 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,214 | INFO     | . stage-in = 0 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,214 | INFO     | . payload execution = 82124 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,214 | INFO     | . stage-out = 7 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,214 | INFO     | . log creation = 2 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,214 | INFO     | ..............................
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | 
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | job summary report
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | --------------------------------------------------
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | PanDA job id: 6897531736
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | task id: 47556161
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | errors: (none)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | pilot state: finished 
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | transexitcode: 0
[2025-11-26 22:23:05] 2025-11-27 03:22:29,504 | INFO     | exeerrorcode: 0
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | exeerrordiag: 
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | exitcode: 0
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | exitmsg: OK
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | cpuconsumptiontime: 241592 s
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | nevents: 1000
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | neventsw: 0
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | pid: 2746762
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | pgrp: 2746762
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | corecount: 8
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | event service: False
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | sizes: {0: 2284032, 1: 2284116, 2: 2284315, 13: 2284315, 24: 2284371, 30: 2284661, 35: 2284817, 82167: 2348539, 82176: 2357533, 82178: 2357589, 82208: 2357835}
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | --------------------------------------------------
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | 
[2025-11-26 22:23:05] 2025-11-27 03:22:29,505 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 22:23:05] 2025-11-27 03:22:29,540 | INFO     | time since job start (82271s) is within the limit (172800.0s)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | job 6897531736 has completed (purged errors)
[2025-11-26 22:23:05] 2025-11-27 03:22:29,559 | INFO     | overall cleanup function is called
[2025-11-26 22:23:05] 2025-11-27 03:22:30,600 | INFO     | --- collectZombieJob: --- 10, [2746762]
[2025-11-26 22:23:05] 2025-11-27 03:22:30,600 | INFO     | zombie collector waiting for pid 2746762
[2025-11-26 22:23:05] 2025-11-27 03:22:30,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:23:05] 2025-11-27 03:22:30,600 | INFO     | collected zombie processes
[2025-11-26 22:23:05] 2025-11-27 03:22:30,600 | INFO     | will attempt to kill all subprocesses of pid=2746762
[2025-11-26 22:23:05] 2025-11-27 03:22:31,617 | INFO     | process IDs to be killed: [2746762] (in reverse order)
[2025-11-26 22:23:05] 2025-11-27 03:22:31,979 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:23:05] 2025-11-27 03:22:31,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:23:05] 2025-11-27 03:22:32,033 | INFO     | did not find any defunct processes belonging to 2746762
[2025-11-26 22:23:05] 2025-11-27 03:22:32,065 | INFO     | did not find any defunct processes belonging to 2746762
[2025-11-26 22:23:05] 2025-11-27 03:22:32,069 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:23:05] 2025-11-27 03:22:32,070 | INFO     | ready for new job
[2025-11-26 22:23:05] 2025-11-27 03:22:32,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:23:05] 2025-11-27 03:22:32,079 | INFO     | ***************************************
[2025-11-26 22:23:05] 2025-11-27 03:22:32,080 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:23:05] 2025-11-27 03:22:32,080 | INFO     | ***************************************
[2025-11-26 22:23:05] 2025-11-27 03:22:32,080 | INFO     | 
[2025-11-26 22:23:05] 2025-11-27 03:22:32,087 | INFO     | architecture information:
[2025-11-26 22:23:05] 2025-11-27 03:22:32,091 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:23:05] 2025-11-27 03:22:32,127 | INFO     | cat /etc/os-release:
[2025-11-26 22:23:05] NAME="CentOS Linux"
[2025-11-26 22:23:05] VERSION="7 (Core)"
[2025-11-26 22:23:05] ID="centos"
[2025-11-26 22:23:05] ID_LIKE="rhel fedora"
[2025-11-26 22:23:05] VERSION_ID="7"
[2025-11-26 22:23:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:23:05] ANSI_COLOR="0;31"
[2025-11-26 22:23:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:23:05] HOME_URL="https://www.centos.org/"
[2025-11-26 22:23:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:23:05] 
[2025-11-26 22:23:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:23:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:23:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:23:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:23:05] 
[2025-11-26 22:23:05] 2025-11-27 03:22:32,128 | INFO     | ***************************************
[2025-11-26 22:23:05] 2025-11-27 03:22:32,631 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 22:23:05] 2025-11-27 03:22:32,739 | INFO     | sufficient remaining disk space (71149027328 B)
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | INFO     | update_server=False
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | INFO     | aborting loop
[2025-11-26 22:23:05] 2025-11-27 03:22:32,740 | INFO     | all payload control threads have been joined
[2025-11-26 22:23:05] 2025-11-27 03:22:32,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:23:05] 2025-11-27 03:22:33,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:23:05] 2025-11-27 03:22:33,489 | INFO     | all data control threads have been joined
[2025-11-26 22:23:05] 2025-11-27 03:22:33,748 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:33,749 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:33,749 | INFO     | [payload] control thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:33,749 | INFO     | all job control threads have been joined
[2025-11-26 22:23:05] 2025-11-27 03:22:34,047 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,061 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,489 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,495 | INFO     | [data] control thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:23:05] 2025-11-27 03:22:34,609 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,609 | INFO     | [job] validate thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,736 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:34,755 | INFO     | [job] control thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:35,048 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:35,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:35,110 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:35,533 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:36,837 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:23:05] 2025-11-27 03:22:42,104 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:23:05] 2025-11-27 03:22:43,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203007399744)>', '<ExcThread(monitor, started 140202647459584)>']
[2025-11-26 22:23:05] 2025-11-27 03:22:48,792 | INFO     | all workflow threads have been joined
[2025-11-26 22:23:05] 2025-11-27 03:22:48,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:23:05] 2025-11-27 03:22:48,793 | INFO     | traces error code: 0
[2025-11-26 22:23:05] 2025-11-27 03:22:48,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:23:05] 2025-11-27 03:23:03,631 | INFO     | PID=2738836 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:23:05] 2025-11-27 03:23:03,631 | INFO     | .. there are 38 such processes running
[2025-11-26 22:23:05] 2025-11-27 03:23:03,632 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:23:05] 2025-11-27 03:23:03,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:23:05] 2025-11-27 03:23:03,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:23:05] 2025-11-27 03:23:03,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:23:05] 2025-11-27 03:23:03,632 | INFO     | [monitor] control thread has ended
[2025-11-26 22:23:05] 2025-11-27 03:23:04,003 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:23:05] 2025-11-27 03:23:04,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:23:05] 2025-11-27 03:23:04,036 [wrapper] pilotpid: 2738836
[2025-11-26 22:23:05] 2025-11-27 03:23:04,051 [wrapper] Pilot exit status: 0
[2025-11-26 22:23:05] 2025-11-27 03:23:04,124 [wrapper] pandaids: 6897531736
[2025-11-26 22:23:05] 2025-11-27 03:23:04,410 [wrapper] cleanup supervisor_pilot 3357651 2738837
[2025-11-26 22:23:05] 2025-11-27 03:23:04,415 [wrapper] Test setup, not cleaning
[2025-11-26 22:23:05] 2025-11-27 03:23:04,419 [wrapper] apfmon messages muted
[2025-11-26 22:23:05] 2025-11-27 03:23:04,421 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:23:05] 2025-11-27 03:23:04,424 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:23:05]  *** Error codes and diagnostics ***
[2025-11-26 22:23:05]     "exeErrorCode": 0,
[2025-11-26 22:23:05]     "exeErrorDiag": "",
[2025-11-26 22:23:05]     "pilotErrorCode": 0,
[2025-11-26 22:23:05]     "pilotErrorDiag": "",
[2025-11-26 22:23:05]  *** Listing of results directory ***
[2025-11-26 22:23:05] total 1321772
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 22:23:05] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:23:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:30 run_atlas
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:30 job.xml
[2025-11-26 22:23:05] -rw-r--r--. 2 boincer umatlas 410176668 Nov 25 23:30 EVNT.47483658._002310.pool.root.1
[2025-11-26 22:23:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:30 shared
[2025-11-26 22:23:05] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 23:30 input.tar.gz
[2025-11-26 22:23:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:30 start_atlas.sh
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:30 boinc_lockfile
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 23:30 pandaJob.out
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas        57 Nov 25 23:30 setup.sh.local
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas    991877 Nov 25 23:31 agis_schedconf.cvmfs.json
[2025-11-26 22:23:05] drwx------. 5 boincer umatlas      4096 Nov 25 23:31 pilot3
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:05 boinc_task_state.xml
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas 913017896 Nov 26 22:20 HITS.47556161._002931.pool.root.1
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas      1067 Nov 26 22:21 memory_monitor_summary.json
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas   2425094 Nov 26 22:21 log.47556161._002931.job.log.tgz.1
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas      6845 Nov 26 22:22 init_data.xml
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas        95 Nov 26 22:22 pilot_heartbeat.json
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas      8637 Nov 26 22:22 heartbeat.json
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:23 boinc_mmap_file
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas       823 Nov 26 22:23 pilotlog.txt
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas  10767740 Nov 26 22:23 log.47556161._002931.job.log.1
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:23 wrapper_checkpoint.txt
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas       353 Nov 26 22:23 output.list
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:23 runtime_log
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas  13209600 Nov 26 22:23 result.tar.gz
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas       663 Nov 26 22:23 yRaKDmgaBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqcJKDmtnKDAn.diag
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 22:23 runtime_log.err
[2025-11-26 22:23:05] -rw-r--r--. 1 boincer umatlas     21677 Nov 26 22:23 stderr.txt
[2025-11-26 22:23:05] HITS file was successfully produced:
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas 913017896 Nov 26 22:20 shared/HITS.pool.root.1
[2025-11-26 22:23:05]  *** Contents of shared directory: ***
[2025-11-26 22:23:05] total 1305688
[2025-11-26 22:23:05] -rw-r--r--. 2 boincer umatlas 410176668 Nov 25 23:30 ATLAS.root_0
[2025-11-26 22:23:05] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 23:30 input.tar.gz
[2025-11-26 22:23:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:30 start_atlas.sh
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas 913017896 Nov 26 22:20 HITS.pool.root.1
[2025-11-26 22:23:05] -rw-------. 1 boincer umatlas  13209600 Nov 26 22:23 result.tar.gz
22:23:06 (2734491): run_atlas exited; CPU time 243895.969576
22:23:06 (2734491): called boinc_finish(0)

</stderr_txt>
]]>

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