Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:21:53 (440770): wrapper (7.7.26015): starting
22:21:53 (440770): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:21:53] Arguments: --nthreads 8
[2025-11-25 22:21:53] Threads: 8
[2025-11-25 22:21:53] Checking for CVMFS
[2025-11-25 22:21:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:21:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:21:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:21:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:21:53] 2.13.3.0 12275 29501 378912 153307 2 349 24500110 40960000 22169 16776704 25 176328103 99.682 150032622 36298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:21:53] CVMFS is ok
[2025-11-25 22:21:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:21:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:21:53] Further information can be found at the LHC@home message board.
[2025-11-25 22:21:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:21:53] Checking for apptainer binary...
[2025-11-25 22:21:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:21:53] Running /usr/bin/apptainer --version
[2025-11-25 22:21:53] apptainer version 1.4.4-1.el9
[2025-11-25 22:21:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:21:53] c7-11-11.aglt2.org
[2025-11-25 22:21:53] apptainer works
[2025-11-25 22:21:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:21:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:21:53] Starting ATLAS job with PandaID=6897863632
[2025-11-25 22:21:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:09:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:09:43] 2025-11-26 17:09:07,353 | INFO     | monitor loop #3027: job 0:6897863632 is in state 'finished'
[2025-11-26 12:09:43] 2025-11-26 17:09:07,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:09:43] 2025-11-26 17:09:08,518 | INFO     | time since job start (49623s) is within the limit (172800.0s)
[2025-11-26 12:09:43] 2025-11-26 17:09:08,979 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:09:43] 2025-11-26 17:09:08,986 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.0693125000003
[2025-11-26 12:09:43] 2025-11-26 17:09:09,003 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897863632/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,004 | INFO     | extracted standard info from prmon json
[2025-11-26 12:09:43] 2025-11-26 17:09:09,004 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:09:43] 2025-11-26 17:09:09,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:09:43] 2025-11-26 17:09:09,013 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:09:43] 2025-11-26 17:09:09,014 | INFO     | sum of square deviations: 166623508525.6115
[2025-11-26 12:09:43] 2025-11-26 17:09:09,024 | INFO     | sum of deviations: 1208460411027.0947
[2025-11-26 12:09:43] 2025-11-26 17:09:09,024 | INFO     | mean x: 1764152121.7884378
[2025-11-26 12:09:43] 2025-11-26 17:09:09,024 | INFO     | mean y: 2960781.92496925
[2025-11-26 12:09:43] 2025-11-26 17:09:09,024 | INFO     | intersect: -12791800395.985792
[2025-11-26 12:09:43] 2025-11-26 17:09:09,025 | INFO     | chi2: 5.677544083504792
[2025-11-26 12:09:43] 2025-11-26 17:09:09,026 | INFO     | sum of square deviations: 163568737981.49384
[2025-11-26 12:09:43] 2025-11-26 17:09:09,036 | INFO     | sum of deviations: 1489563802519.618
[2025-11-26 12:09:43] 2025-11-26 17:09:09,036 | INFO     | mean x: 1764151969.3056931
[2025-11-26 12:09:43] 2025-11-26 17:09:09,036 | INFO     | mean y: 2974816.4306930695
[2025-11-26 12:09:43] 2025-11-26 17:09:09,036 | INFO     | intersect: -16062545698.368238
[2025-11-26 12:09:43] 2025-11-26 17:09:09,038 | INFO     | chi2: 2.546419762122584
[2025-11-26 12:09:43] 2025-11-26 17:09:09,038 | INFO     | current chi2=2.546419762122584 (change=55.14927361778123 %)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,039 | INFO     | sum of square deviations: 160551450968.1768
[2025-11-26 12:09:43] 2025-11-26 17:09:09,048 | INFO     | sum of deviations: 1599409891721.9333
[2025-11-26 12:09:43] 2025-11-26 17:09:09,049 | INFO     | mean x: 1764151816.8206725
[2025-11-26 12:09:43] 2025-11-26 17:09:09,049 | INFO     | mean y: 2980363.5342465756
[2025-11-26 12:09:43] 2025-11-26 17:09:09,049 | INFO     | intersect: -17571459788.249115
[2025-11-26 12:09:43] 2025-11-26 17:09:09,049 | INFO     | chi2: 1.9131025538126718
[2025-11-26 12:09:43] 2025-11-26 17:09:09,050 | INFO     | current chi2=1.9131025538126718 (change=24.8708880495809 %)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,050 | INFO     | right removable region: 802
[2025-11-26 12:09:43] 2025-11-26 17:09:09,050 | INFO     | sum of square deviations: 163567404587.10376
[2025-11-26 12:09:43] 2025-11-26 17:09:09,060 | INFO     | sum of deviations: 1019648442404.0591
[2025-11-26 12:09:43] 2025-11-26 17:09:09,061 | INFO     | mean x: 1764152274.3044555
[2025-11-26 12:09:43] 2025-11-26 17:09:09,061 | INFO     | mean y: 2970184.8168316833
[2025-11-26 12:09:43] 2025-11-26 17:09:09,061 | INFO     | intersect: -10994423355.778246
[2025-11-26 12:09:43] 2025-11-26 17:09:09,061 | INFO     | chi2: 3.9576834264923755
[2025-11-26 12:09:43] 2025-11-26 17:09:09,062 | INFO     | current chi2=3.9576834264923755 (change=30.292334708755497 %)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,062 | INFO     | sum of square deviations: 160549080040.7224
[2025-11-26 12:09:43] 2025-11-26 17:09:09,114 | INFO     | sum of deviations: 979367982780.2848
[2025-11-26 12:09:43] 2025-11-26 17:09:09,114 | INFO     | mean x: 1764152426.8156912
[2025-11-26 12:09:43] 2025-11-26 17:09:09,114 | INFO     | mean y: 2972218.5965130758
[2025-11-26 12:09:43] 2025-11-26 17:09:09,114 | INFO     | intersect: -10758561906.22807
[2025-11-26 12:09:43] 2025-11-26 17:09:09,137 | INFO     | chi2: 3.9406449562798787
[2025-11-26 12:09:43] 2025-11-26 17:09:09,138 | INFO     | current chi2=3.9406449562798787 (change=0.43051624843065633 %)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,138 | INFO     | left removable region: 20
[2025-11-26 12:09:43] 2025-11-26 17:09:09,139 | INFO     | sum of square deviations: 148279608697.7152
[2025-11-26 12:09:43] 2025-11-26 17:09:09,154 | INFO     | sum of deviations: 1320126684864.3984
[2025-11-26 12:09:43] 2025-11-26 17:09:09,154 | INFO     | mean x: 1764152396.3772378
[2025-11-26 12:09:43] 2025-11-26 17:09:09,181 | INFO     | mean y: 2995239.415601023
[2025-11-26 12:09:43] 2025-11-26 17:09:09,181 | INFO     | intersect: -15703174173.081322
[2025-11-26 12:09:43] 2025-11-26 17:09:09,182 | INFO     | chi2: 0.1379015084493986
[2025-11-26 12:09:43] 2025-11-26 17:09:09,182 | INFO     | current memory leak: 8.90 B/s (using 782 data points, chi2=0.14)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | could have reported an average CPU frequency of 3280 MHz (31 samples)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | ..............................
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . Timing measurements:
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . get job = 0 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . initial setup = 2 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . payload setup = 6 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . stage-in = 0 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . payload execution = 49580 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . stage-out = 4 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | . log creation = 1 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,183 | INFO     | ..............................
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | 
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | job summary report
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | --------------------------------------------------
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | PanDA job id: 6897863632
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | task id: 47556161
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | errors: (none)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | pilot state: finished 
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | transexitcode: 0
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | exeerrorcode: 0
[2025-11-26 12:09:43] 2025-11-26 17:09:09,259 | INFO     | exeerrordiag: 
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | exitcode: 0
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | exitmsg: OK
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | cpuconsumptiontime: 200150 s
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | nevents: 1000
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | neventsw: 0
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | pid: 451014
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | pgrp: 451014
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | corecount: 8
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | event service: False
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | sizes: {0: 2284032, 1: 2284287, 5: 2284549, 12: 2284605, 49587: 2332812, 49593: 2341806, 49594: 2341990, 49608: 2342236}
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | --------------------------------------------------
[2025-11-26 12:09:43] 2025-11-26 17:09:09,260 | INFO     | 
[2025-11-26 12:09:43] 2025-11-26 17:09:09,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,287 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:09:43] 2025-11-26 17:09:09,288 | INFO     | job 6897863632 has completed (purged errors)
[2025-11-26 12:09:43] 2025-11-26 17:09:09,288 | INFO     | overall cleanup function is called
[2025-11-26 12:09:43] 2025-11-26 17:09:10,303 | INFO     | --- collectZombieJob: --- 10, [451014]
[2025-11-26 12:09:43] 2025-11-26 17:09:10,304 | INFO     | zombie collector waiting for pid 451014
[2025-11-26 12:09:43] 2025-11-26 17:09:10,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:09:43] 2025-11-26 17:09:10,304 | INFO     | collected zombie processes
[2025-11-26 12:09:43] 2025-11-26 17:09:10,304 | INFO     | will attempt to kill all subprocesses of pid=451014
[2025-11-26 12:09:43] 2025-11-26 17:09:10,831 | INFO     | process IDs to be killed: [451014] (in reverse order)
[2025-11-26 12:09:43] 2025-11-26 17:09:11,006 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:09:43] 2025-11-26 17:09:11,006 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:09:43] 2025-11-26 17:09:11,038 | INFO     | did not find any defunct processes belonging to 451014
[2025-11-26 12:09:43] 2025-11-26 17:09:11,061 | INFO     | did not find any defunct processes belonging to 451014
[2025-11-26 12:09:43] 2025-11-26 17:09:11,063 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:09:43] 2025-11-26 17:09:11,063 | INFO     | ready for new job
[2025-11-26 12:09:43] 2025-11-26 17:09:11,063 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:09:43] 2025-11-26 17:09:11,067 | INFO     | ***************************************
[2025-11-26 12:09:43] 2025-11-26 17:09:11,068 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:09:43] 2025-11-26 17:09:11,068 | INFO     | ***************************************
[2025-11-26 12:09:43] 2025-11-26 17:09:11,068 | INFO     | 
[2025-11-26 12:09:43] 2025-11-26 17:09:11,071 | INFO     | architecture information:
[2025-11-26 12:09:43] 2025-11-26 17:09:11,072 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:09:43] 2025-11-26 17:09:11,093 | INFO     | cat /etc/os-release:
[2025-11-26 12:09:43] NAME="CentOS Linux"
[2025-11-26 12:09:43] VERSION="7 (Core)"
[2025-11-26 12:09:43] ID="centos"
[2025-11-26 12:09:43] ID_LIKE="rhel fedora"
[2025-11-26 12:09:43] VERSION_ID="7"
[2025-11-26 12:09:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:09:43] ANSI_COLOR="0;31"
[2025-11-26 12:09:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:09:43] HOME_URL="https://www.centos.org/"
[2025-11-26 12:09:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:09:43] 
[2025-11-26 12:09:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:09:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:09:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:09:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:09:43] 
[2025-11-26 12:09:43] 2025-11-26 17:09:11,093 | INFO     | ***************************************
[2025-11-26 12:09:43] 2025-11-26 17:09:11,599 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 12:09:43] 2025-11-26 17:09:11,685 | INFO     | sufficient remaining disk space (78971404288 B)
[2025-11-26 12:09:43] 2025-11-26 17:09:11,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:09:43] 2025-11-26 17:09:11,686 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:09:43] 2025-11-26 17:09:11,686 | INFO     | update_server=False
[2025-11-26 12:09:43] 2025-11-26 17:09:11,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:09:43] 2025-11-26 17:09:11,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:09:43] 2025-11-26 17:09:11,687 | INFO     | aborting loop
[2025-11-26 12:09:43] 2025-11-26 17:09:11,924 | INFO     | all payload control threads have been joined
[2025-11-26 12:09:43] 2025-11-26 17:09:12,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:09:43] 2025-11-26 17:09:12,692 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:12,695 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:12,723 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:12,734 | INFO     | all data control threads have been joined
[2025-11-26 12:09:43] 2025-11-26 17:09:12,844 | INFO     | all job control threads have been joined
[2025-11-26 12:09:43] 2025-11-26 17:09:12,929 | INFO     | [payload] control thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:12,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,236 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,411 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,412 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,604 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,641 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,743 | INFO     | [data] control thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,858 | INFO     | [job] control thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:13,912 | INFO     | [job] validate thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:14,194 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:14,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:09:43] 2025-11-26 17:09:14,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:09:43] 2025-11-26 17:09:15,298 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:18,894 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:09:43] 2025-11-26 17:09:32,586 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:09:43] 2025-11-26 17:09:33,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098028300096)>', '<ExcThread(monitor, started 140097378830080)>']
[2025-11-26 12:09:43] 2025-11-26 17:09:38,184 | INFO     | all workflow threads have been joined
[2025-11-26 12:09:43] 2025-11-26 17:09:38,184 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:09:43] 2025-11-26 17:09:38,184 | INFO     | traces error code: 0
[2025-11-26 12:09:43] 2025-11-26 17:09:38,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:09:43] 2025-11-26 17:09:42,437 | INFO     | PID=444431 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 12:09:43] 2025-11-26 17:09:42,437 | INFO     | .. there are 41 such processes running
[2025-11-26 12:09:43] 2025-11-26 17:09:42,438 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:09:43] 2025-11-26 17:09:42,438 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:09:43] 2025-11-26 17:09:42,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:09:43] 2025-11-26 17:09:42,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:09:43] 2025-11-26 17:09:42,439 | INFO     | [monitor] control thread has ended
[2025-11-26 12:09:43] 2025-11-26 17:09:42,574 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:09:43] 2025-11-26 17:09:42,585 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:09:43] 2025-11-26 17:09:42,602 [wrapper] pilotpid: 444431
[2025-11-26 12:09:43] 2025-11-26 17:09:42,605 [wrapper] Pilot exit status: 0
[2025-11-26 12:09:43] 2025-11-26 17:09:42,662 [wrapper] pandaids: 6897863632
[2025-11-26 12:09:43] 2025-11-26 17:09:42,807 [wrapper] cleanup supervisor_pilot 4136985 444432
[2025-11-26 12:09:43] 2025-11-26 17:09:42,821 [wrapper] Test setup, not cleaning
[2025-11-26 12:09:43] 2025-11-26 17:09:42,824 [wrapper] apfmon messages muted
[2025-11-26 12:09:43] 2025-11-26 17:09:42,827 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:09:43] 2025-11-26 17:09:42,830 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:09:43]  *** Error codes and diagnostics ***
[2025-11-26 12:09:43]     "exeErrorCode": 0,
[2025-11-26 12:09:43]     "exeErrorDiag": "",
[2025-11-26 12:09:43]     "pilotErrorCode": 0,
[2025-11-26 12:09:43]     "pilotErrorDiag": "",
[2025-11-26 12:09:43]  *** Listing of results directory ***
[2025-11-26 12:09:43] total 1315368
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 12:09:43] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:09:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:21 run_atlas
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:21 job.xml
[2025-11-26 12:09:43] -rw-r--r--. 2 boincer umatlas 409145218 Nov 25 22:21 EVNT.47483658._002329.pool.root.1
[2025-11-26 12:09:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:21 start_atlas.sh
[2025-11-26 12:09:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:21 shared
[2025-11-26 12:09:43] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 22:21 input.tar.gz
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:21 boinc_lockfile
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 22:21 pandaJob.out
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas        57 Nov 25 22:21 setup.sh.local
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas    991877 Nov 25 22:22 agis_schedconf.cvmfs.json
[2025-11-26 12:09:43] drwx------. 5 boincer umatlas      4096 Nov 25 22:22 pilot3
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas       533 Nov 26 11:56 boinc_task_state.xml
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas      6905 Nov 26 12:01 init_data.xml
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas 917240890 Nov 26 12:08 HITS.47556161._003111.pool.root.1
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas      1056 Nov 26 12:08 memory_monitor_summary.json
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:08 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas   1988036 Nov 26 12:08 log.47556161._003111.job.log.tgz.1
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas      8608 Nov 26 12:09 heartbeat.json
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:09 boinc_mmap_file
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:09 wrapper_checkpoint.txt
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas        95 Nov 26 12:09 pilot_heartbeat.json
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas       822 Nov 26 12:09 pilotlog.txt
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas   6330435 Nov 26 12:09 log.47556161._003111.job.log.1
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas       353 Nov 26 12:09 output.list
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:09 runtime_log
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas   8335360 Nov 26 12:09 result.tar.gz
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 12:09 runtime_log.err
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas       663 Nov 26 12:09 1hzMDmraBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQdJKDmrPzDln.diag
[2025-11-26 12:09:43] -rw-r--r--. 1 boincer umatlas     21093 Nov 26 12:09 stderr.txt
[2025-11-26 12:09:43] HITS file was successfully produced:
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas 917240890 Nov 26 12:08 shared/HITS.pool.root.1
[2025-11-26 12:09:43]  *** Contents of shared directory: ***
[2025-11-26 12:09:43] total 1304044
[2025-11-26 12:09:43] -rw-r--r--. 2 boincer umatlas 409145218 Nov 25 22:21 ATLAS.root_0
[2025-11-26 12:09:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:21 start_atlas.sh
[2025-11-26 12:09:43] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 22:21 input.tar.gz
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas 917240890 Nov 26 12:08 HITS.pool.root.1
[2025-11-26 12:09:43] -rw-------. 1 boincer umatlas   8335360 Nov 26 12:09 result.tar.gz
12:09:44 (440770): run_atlas exited; CPU time 200353.699033
12:09:44 (440770): called boinc_finish(0)

</stderr_txt>
]]>

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