Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:10:04 (4033955): wrapper (7.7.26015): starting
12:10:04 (4033955): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 12:10:04] Arguments: --nthreads 3
[2025-11-26 12:10:04] Threads: 3
[2025-11-26 12:10:04] Checking for CVMFS
[2025-11-26 12:10:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:10:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:10:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:10:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:10:04] 2.9.2.0 3650771 2840 77876 153318 0 81 7157674 36864001 0 130560 2 1056894 99.979 105750 132 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 12:10:04] CVMFS is ok
[2025-11-26 12:10:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:10:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:10:04] Further information can be found at the LHC@home message board.
[2025-11-26 12:10:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:10:04] Checking for apptainer binary...
[2025-11-26 12:10:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 12:10:04] Running /usr/bin/apptainer --version
[2025-11-26 12:10:04] apptainer version 1.4.1-1.1
[2025-11-26 12:10:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:10:04] thA330a
[2025-11-26 12:10:04] apptainer works
[2025-11-26 12:10:04] Set ATHENA_PROC_NUMBER=3
[2025-11-26 12:10:04] Set ATHENA_CORE_NUMBER=3
[2025-11-26 12:10:04] Starting ATLAS job with PandaID=6897488228
[2025-11-26 12:10:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:03:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:03:48] 2025-11-26 19:03:14,657 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 20:03:48] 2025-11-26 19:03:14,670 | INFO     | sufficient remaining disk space (253456547840 B)
[2025-11-26 20:03:48] 2025-11-26 19:03:14,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:03:48] 2025-11-26 19:03:14,670 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:03:48] 2025-11-26 19:03:14,670 | INFO     | update_server=False
[2025-11-26 20:03:48] 2025-11-26 19:03:14,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:03:48] 2025-11-26 19:03:14,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:03:48] 2025-11-26 19:03:14,726 | INFO     | all data control threads have been joined
[2025-11-26 20:03:48] 2025-11-26 19:03:15,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:03:48] 2025-11-26 19:03:15,073 | INFO     | aborting loop
[2025-11-26 20:03:48] 2025-11-26 19:03:15,676 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:15,676 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:15,732 | INFO     | [data] control thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:15,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:03:48] 2025-11-26 19:03:15,763 | INFO     | all payload control threads have been joined
[2025-11-26 20:03:48] 2025-11-26 19:03:15,869 | INFO     | all job control threads have been joined
[2025-11-26 20:03:48] 2025-11-26 19:03:15,887 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:15,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:03:48] 2025-11-26 19:03:16,078 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,294 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,519 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,638 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,668 | INFO     | [job] validate thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,769 | INFO     | [payload] control thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,875 | INFO     | [job] control thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,914 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:16,922 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:18,051 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:19,753 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:03:48] 2025-11-26 19:03:41,718 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:03:48] 2025-11-26 19:03:43,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630544164672)>', '<ExcThread(monitor, started 140629761840896)>']
[2025-11-26 20:03:48] 2025-11-26 19:03:45,036 | INFO     | PID=4037675 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:03:48] 2025-11-26 19:03:45,036 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:03:48] 2025-11-26 19:03:45,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:03:48] 2025-11-26 19:03:45,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:03:48] 2025-11-26 19:03:45,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:03:48] 2025-11-26 19:03:45,037 | INFO     | [monitor] control thread has ended
[2025-11-26 20:03:48] 2025-11-26 19:03:48,159 | INFO     | all workflow threads have been joined
[2025-11-26 20:03:48] 2025-11-26 19:03:48,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:03:48] 2025-11-26 19:03:48,159 | INFO     | traces error code: 0
[2025-11-26 20:03:48] 2025-11-26 19:03:48,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:03:48] 2025-11-26 19:03:48,208 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:03:48] 2025-11-26 19:03:48,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:03:48] 2025-11-26 19:03:48,213 [wrapper] pilotpid: 4037675
[2025-11-26 20:03:48] 2025-11-26 19:03:48,216 [wrapper] Pilot exit status: 0
[2025-11-26 20:03:48] 2025-11-26 19:03:48,223 [wrapper] pandaids: 6897488228
[2025-11-26 20:03:48] 2025-11-26 19:03:48,239 [wrapper] cleanup supervisor_pilot 4094642 4037676
[2025-11-26 20:03:48] 2025-11-26 19:03:48,242 [wrapper] Test setup, not cleaning
[2025-11-26 20:03:48] 2025-11-26 19:03:48,244 [wrapper] apfmon messages muted
[2025-11-26 20:03:48] 2025-11-26 19:03:48,247 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:03:48] 2025-11-26 19:03:48,249 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:03:48]  *** Error codes and diagnostics ***
[2025-11-26 20:03:48]     "exeErrorCode": 0,
[2025-11-26 20:03:48]     "exeErrorDiag": "",
[2025-11-26 20:03:48]     "pilotErrorCode": 0,
[2025-11-26 20:03:48]     "pilotErrorDiag": "",
[2025-11-26 20:03:48]  *** Listing of results directory ***
[2025-11-26 20:03:48] total 1318132
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-26 20:03:48] -rwx------ 1 boinc boinc     36292 Nov 25 17:57 runpilot2-wrapper.sh
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc       100 Nov 26 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:03:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 12:10 run_atlas
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc       105 Nov 26 12:10 job.xml
[2025-11-26 20:03:48] -rw-r--r-- 2 boinc boinc 410699308 Nov 26 12:10 EVNT.47483658._002265.pool.root.1
[2025-11-26 20:03:48] -rw-r--r-- 2 boinc boinc    590109 Nov 26 12:10 input.tar.gz
[2025-11-26 20:03:48] -rw-r--r-- 2 boinc boinc     15847 Nov 26 12:10 start_atlas.sh
[2025-11-26 20:03:48] drwxrwx--x 2 boinc boinc      4096 Nov 26 12:10 shared
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc         0 Nov 26 12:10 boinc_setup_complete
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc      6441 Nov 26 12:10 init_data.xml
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc         0 Nov 26 12:10 boinc_lockfile
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc      2786 Nov 26 12:10 pandaJob.out
[2025-11-26 20:03:48] -rw------- 1 boinc boinc    991827 Nov 26 12:10 agis_schedconf.cvmfs.json
[2025-11-26 20:03:48] drwx------ 5 boinc boinc      4096 Nov 26 12:10 pilot3
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc       532 Nov 26 20:00 boinc_task_state.xml
[2025-11-26 20:03:48] -rw------- 1 boinc boinc 924845865 Nov 26 20:02 HITS.47556161._002489.pool.root.1
[2025-11-26 20:03:48] -rw------- 1 boinc boinc      1025 Nov 26 20:03 memory_monitor_summary.json
[2025-11-26 20:03:48] -rw------- 1 boinc boinc   1516240 Nov 26 20:03 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:03:48] -rw------- 1 boinc boinc   1165014 Nov 26 20:03 log.47556161._002489.job.log.tgz.1
[2025-11-26 20:03:48] -rw------- 1 boinc boinc      8567 Nov 26 20:03 heartbeat.json
[2025-11-26 20:03:48] -rw------- 1 boinc boinc        95 Nov 26 20:03 pilot_heartbeat.json
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc        28 Nov 26 20:03 wrapper_checkpoint.txt
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc      8192 Nov 26 20:03 boinc_mmap_file
[2025-11-26 20:03:48] -rw------- 1 boinc boinc      4752 Nov 26 20:03 pilotlog.txt
[2025-11-26 20:03:48] -rw------- 1 boinc boinc   3992959 Nov 26 20:03 log.47556161._002489.job.log.1
[2025-11-26 20:03:48] -rw------- 1 boinc boinc       353 Nov 26 20:03 output.list
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc       620 Nov 26 20:03 runtime_log
[2025-11-26 20:03:48] -rw------- 1 boinc boinc   5181440 Nov 26 20:03 result.tar.gz
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc      8903 Nov 26 20:03 runtime_log.err
[2025-11-26 20:03:48] -rw------- 1 boinc boinc       666 Nov 26 20:03 gAmMDmOXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTcJKDmd2Vxlm.diag
[2025-11-26 20:03:48] -rw-r--r-- 1 boinc boinc      7862 Nov 26 20:03 stderr.txt
[2025-11-26 20:03:48] HITS file was successfully produced:
[2025-11-26 20:03:48] -rw------- 1 boinc boinc 924845865 Nov 26 20:02 shared/HITS.pool.root.1
[2025-11-26 20:03:48]  *** Contents of shared directory: ***
[2025-11-26 20:03:48] total 1309912
[2025-11-26 20:03:48] -rw-r--r-- 2 boinc boinc 410699308 Nov 26 12:10 ATLAS.root_0
[2025-11-26 20:03:48] -rw-r--r-- 2 boinc boinc    590109 Nov 26 12:10 input.tar.gz
[2025-11-26 20:03:48] -rw-r--r-- 2 boinc boinc     15847 Nov 26 12:10 start_atlas.sh
[2025-11-26 20:03:48] -rw------- 1 boinc boinc 924845865 Nov 26 20:02 HITS.pool.root.1
[2025-11-26 20:03:48] -rw------- 1 boinc boinc   5181440 Nov 26 20:03 result.tar.gz
20:03:50 (4033955): run_atlas exited; CPU time 83836.162484
20:03:50 (4033955): called boinc_finish(0)

</stderr_txt>
]]>

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