Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:11:06 (1518566): wrapper (7.7.26015): starting
19:11:06 (1518566): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:11:06] Arguments: --nthreads 8
[2025-11-25 19:11:06] Threads: 8
[2025-11-25 19:11:06] Checking for CVMFS
[2025-11-25 19:11:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:11:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:11:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:11:07] 2.11.3.0 1215219 27827 186160 153305 1 133 31542232 45568000 22132 130560 0 169480412 99.788 115641638 22112 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-25 19:11:07] CVMFS is ok
[2025-11-25 19:11:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:11:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:11:07] Further information can be found at the LHC@home message board.
[2025-11-25 19:11:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:11:07] Checking for apptainer binary...
[2025-11-25 19:11:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:11:07] Running /usr/bin/apptainer --version
[2025-11-25 19:11:07] apptainer version 1.4.1-1.el9
[2025-11-25 19:11:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:11:08] wns0018.triumf.lcg
[2025-11-25 19:11:08] apptainer works
[2025-11-25 19:11:08] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:11:08] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:11:09] Starting ATLAS job with PandaID=6897487746
[2025-11-25 19:11:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:20:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:20:59] 2025-11-26 03:19:51,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 19:20:59] 2025-11-26 03:19:51,674 | WARNING  | wrong length of table data, x=[1764126793.0, 1764126854.0, 1764126915.0, 1764126976.0, 1764127037.0], y=[3524.0, 391698.0, 612855.0, 365542.0, 691849.0] (must be s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | ..............................
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . Timing measurements:
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . get job = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . initial setup = 7 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . payload setup = 19 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . stage-in = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . payload execution = 282 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . stage-out = 1 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . log creation = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | ..............................
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 19:20:59] 2025-11-26 03:19:51,676 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897487746/pilotlog.txt
[2025-11-25 19:20:59] 2025-11-26 03:19:51,831 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 19:20:59] - Log from pilotlog.txt -
[2025-11-25 19:20:59] 2025-11-26 03:19:51,601 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897487746/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:20:59] 2025-11-26 03:19:51,602 | INFO     | extracted standard info from prmon json
[2025-11-25 19:20:59] 2025-11-26 03:19:51,602 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:20:59] 2025-11-26 03:19:51,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:20:59] 2025-11-26 03:19:51,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 19:20:59] 2025-11-26 03:19:51,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 19:20:59] 2025-11-26 03:19:51,674 | WARNING  | wrong length of table data, x=[1764126793.0, 1764126854.0, 1764126915.0, 1764126976.0, 1764127037.0], y=[3524.0, 391698.0, 612855.0, 365542.0, 691849.0] (must be s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | ..............................
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . Timing measurements:
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . get job = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . initial setup = 7 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . payload setup = 19 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . stage-in = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . payload execution = 282 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . stage-out = 1 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . log creation = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | ..............................
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 19:20:59] 2025-11-26 03:19:51,676 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897487746/pilotlog.txt
[2025-11-25 19:20:59] 2025-11-26 03:19:51,831 | WARNING  | 
[2025-11-25 19:20:59] [begin log extracts]
[2025-11-25 19:20:59] - Log from pilotlog.txt -
[2025-11-25 19:20:59] 2025-11-26 03:19:51,601 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897487746/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:20:59] 2025-11-26 03:19:51,602 | INFO     | extracted standard info from prmon json
[2025-11-25 19:20:59] 2025-11-26 03:19:51,602 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:20:59] 2025-11-26 03:19:51,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:20:59] 2025-11-26 03:19:51,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 19:20:59] 2025-11-26 03:19:51,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 19:20:59] 2025-11-26 03:19:51,674 | WARNING  | wrong length of table data, x=[1764126793.0, 1764126854.0, 1764126915.0, 1764126976.0, 1764127037.0], y=[3524.0, 391698.0, 612855.0, 365542.0, 691849.0] (must be s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | ..............................
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . Timing measurements:
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . get job = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . initial setup = 7 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . payload setup = 19 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . stage-in = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . payload execution = 282 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . stage-out = 1 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | . log creation = 0 s
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | ..............................
[2025-11-25 19:20:59] 2025-11-26 03:19:51,675 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 19:20:59] 2025-11-26 03:19:51,676 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897487746/pilotlog.txt
[2025-11-25 19:20:59] [end log extracts]
[2025-11-25 19:20:59] 2025-11-26 03:19:51,832 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 19:20:59] 2025-11-26 03:19:51,832 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 19:20:59] 2025-11-26 03:19:52,249 | INFO     | 
[2025-11-25 19:20:59] 2025-11-26 03:19:52,249 | INFO     | job summary report
[2025-11-25 19:20:59] 2025-11-26 03:19:52,249 | INFO     | --------------------------------------------------
[2025-11-25 19:20:59] 2025-11-26 03:19:52,249 | INFO     | PanDA job id: 6897487746
[2025-11-25 19:20:59] 2025-11-26 03:19:52,249 | INFO     | task id: 47556161
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 19:17:28,408 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | pilot state: failed 
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | transexitcode: 65
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | exeerrorcode: 65
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | exitcode: 65
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | cpuconsumptiontime: 52 s
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | nevents: 0
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | neventsw: 0
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | pid: 1529165
[2025-11-25 19:20:59] 2025-11-26 03:19:52,250 | INFO     | pgrp: 1529165
[2025-11-25 19:20:59] 2025-11-26 03:19:52,251 | INFO     | corecount: 8
[2025-11-25 19:20:59] 2025-11-26 03:19:52,251 | INFO     | event service: False
[2025-11-25 19:20:59] 2025-11-26 03:19:52,251 | INFO     | sizes: {0: 2283437, 1: 2284290, 2: 2284290, 13: 2284318, 15: 2284636, 24: 2284664, 303: 2310292, 304: 2310296, 306: 2314642, 308: 2314698, 441: 2314892}
[2025-11-25 19:20:59] 2025-11-26 03:19:52,251 | INFO     | --------------------------------------------------
[2025-11-25 19:20:59] 2025-11-26 03:19:52,251 | INFO     | 
[2025-11-25 19:20:59] 2025-11-26 03:19:52,251 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 19:20:59] 2025-11-26 03:19:52,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | job 6897487746 has completed (purged errors)
[2025-11-25 19:20:59] 2025-11-26 03:19:52,438 | INFO     | overall cleanup function is called
[2025-11-25 19:20:59] 2025-11-26 03:19:53,514 | INFO     | --- collectZombieJob: --- 10, [1529165]
[2025-11-25 19:20:59] 2025-11-26 03:19:53,514 | INFO     | zombie collector waiting for pid 1529165
[2025-11-25 19:20:59] 2025-11-26 03:19:53,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:20:59] 2025-11-26 03:19:53,514 | INFO     | collected zombie processes
[2025-11-25 19:20:59] 2025-11-26 03:19:53,515 | INFO     | will attempt to kill all subprocesses of pid=1529165
[2025-11-25 19:20:59] 2025-11-26 03:19:54,315 | INFO     | process IDs to be killed: [1529165] (in reverse order)
[2025-11-25 19:20:59] 2025-11-26 03:19:54,458 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:20:59] 2025-11-26 03:19:54,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:20:59] 2025-11-26 03:19:54,466 | INFO     | did not find any defunct processes belonging to 1529165
[2025-11-25 19:20:59] 2025-11-26 03:19:54,473 | INFO     | did not find any defunct processes belonging to 1529165
[2025-11-25 19:20:59] 2025-11-26 03:19:54,473 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:20:59] 2025-11-26 03:19:54,474 | INFO     | ready for new job
[2025-11-25 19:20:59] 2025-11-26 03:19:54,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:20:59] 2025-11-26 03:19:54,475 | INFO     | ***************************************
[2025-11-25 19:20:59] 2025-11-26 03:19:54,475 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:20:59] 2025-11-26 03:19:54,475 | INFO     | ***************************************
[2025-11-25 19:20:59] 2025-11-26 03:19:54,475 | INFO     | 
[2025-11-25 19:20:59] 2025-11-26 03:19:54,476 | INFO     | architecture information:
[2025-11-25 19:20:59] 2025-11-26 03:19:54,477 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:20:59] 2025-11-26 03:19:54,488 | INFO     | cat /etc/os-release:
[2025-11-25 19:20:59] NAME="CentOS Linux"
[2025-11-25 19:20:59] VERSION="7 (Core)"
[2025-11-25 19:20:59] ID="centos"
[2025-11-25 19:20:59] ID_LIKE="rhel fedora"
[2025-11-25 19:20:59] VERSION_ID="7"
[2025-11-25 19:20:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:20:59] ANSI_COLOR="0;31"
[2025-11-25 19:20:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:20:59] HOME_URL="https://www.centos.org/"
[2025-11-25 19:20:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:20:59] 
[2025-11-25 19:20:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:20:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:20:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:20:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:20:59] 
[2025-11-25 19:20:59] 2025-11-26 03:19:54,488 | INFO     | ***************************************
[2025-11-25 19:20:59] 2025-11-26 03:19:54,991 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 19:20:59] 2025-11-26 03:19:55,110 | INFO     | sufficient remaining disk space (1110711468032 B)
[2025-11-25 19:20:59] 2025-11-26 03:19:55,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:20:59] 2025-11-26 03:19:55,111 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:20:59] 2025-11-26 03:19:55,111 | INFO     | update_server=False
[2025-11-25 19:20:59] 2025-11-26 03:19:55,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:20:59] 2025-11-26 03:19:55,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:20:59] 2025-11-26 03:19:55,112 | INFO     | aborting loop
[2025-11-25 19:20:59] 2025-11-26 03:19:55,533 | INFO     | all payload control threads have been joined
[2025-11-25 19:20:59] 2025-11-26 03:19:55,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:20:59] 2025-11-26 03:19:56,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:20:59] 2025-11-26 03:19:56,079 | INFO     | all data control threads have been joined
[2025-11-25 19:20:59] 2025-11-26 03:19:56,117 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,118 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,340 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,357 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,452 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,538 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,547 | INFO     | [payload] control thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:56,705 | INFO     | all job control threads have been joined
[2025-11-25 19:20:59] 2025-11-26 03:19:57,086 | INFO     | [data] control thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:57,196 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:57,245 | INFO     | [job] validate thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:57,254 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:57,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:20:59] 2025-11-26 03:19:57,334 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:57,714 | INFO     | [job] control thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:58,020 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:58,313 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:19:59,865 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:20:59] 2025-11-26 03:20:24,747 | INFO     | PID=1522340 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 19:20:59] 2025-11-26 03:20:24,748 | INFO     | .. there are 33 such processes running
[2025-11-25 19:20:59] 2025-11-26 03:20:24,748 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:20:59] 2025-11-26 03:20:24,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:20:59] 2025-11-26 03:20:24,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:20:59] 2025-11-26 03:20:52,417 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:20:59] 2025-11-26 03:20:53,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817735436096)>', '<ExcThread(monitor, started 139817182537472)>']
[2025-11-25 19:20:59] 2025-11-26 03:20:53,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:20:59] 2025-11-26 03:20:53,977 | INFO     | [monitor] control thread has ended
[2025-11-25 19:20:59] 2025-11-26 03:20:58,546 | INFO     | all workflow threads have been joined
[2025-11-25 19:20:59] 2025-11-26 03:20:58,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:20:59] 2025-11-26 03:20:58,546 | INFO     | traces error code: 0
[2025-11-25 19:20:59] 2025-11-26 03:20:58,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:20:59] 2025-11-26 03:20:58,836 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:20:59] 2025-11-26 03:20:58,875 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:20:59] 2025-11-26 03:20:58,892 [wrapper] pilotpid: 1522340
[2025-11-25 19:20:59] 2025-11-26 03:20:58,894 [wrapper] Pilot exit status: 0
[2025-11-25 19:20:59] 2025-11-26 03:20:59,054 [wrapper] pandaids: 6897487746
[2025-11-25 19:20:59] 2025-11-26 03:20:59,472 [wrapper] cleanup supervisor_pilot 1522346 1522341
[2025-11-25 19:20:59] 2025-11-26 03:20:59,499 [wrapper] Test setup, not cleaning
[2025-11-25 19:20:59] 2025-11-26 03:20:59,540 [wrapper] apfmon messages muted
[2025-11-25 19:20:59] 2025-11-26 03:20:59,569 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:20:59] 2025-11-26 03:20:59,581 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:20:59]  *** Error codes and diagnostics ***
[2025-11-25 19:20:59]     "exeErrorCode": 65,
[2025-11-25 19:20:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 19:20:59]     "pilotErrorCode": 1305,
[2025-11-25 19:20:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 19:20:59]  *** Listing of results directory ***
[2025-11-25 19:20:59] total 405672
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc    576529 Nov 25 08:48 pilot3.tar.gz
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc      5112 Nov 25 08:55 queuedata.json
[2025-11-25 19:20:59] -rwx------. 1 boinc boinc     36292 Nov 25 08:57 runpilot2-wrapper.sh
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc       100 Nov 25 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:20:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 19:11 run_atlas
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc       105 Nov 25 19:11 job.xml
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc      6445 Nov 25 19:11 init_data.xml
[2025-11-25 19:20:59] -rw-r--r--. 2 boinc boinc 411144140 Nov 25 19:11 EVNT.47483658._002252.pool.root.1
[2025-11-25 19:20:59] -rw-r--r--. 2 boinc boinc     15847 Nov 25 19:11 start_atlas.sh
[2025-11-25 19:20:59] drwxrwx--x. 2 boinc boinc      4096 Nov 25 19:11 shared
[2025-11-25 19:20:59] -rw-r--r--. 2 boinc boinc    590104 Nov 25 19:11 input.tar.gz
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc         0 Nov 25 19:11 boinc_lockfile
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc      2786 Nov 25 19:11 pandaJob.out
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc    991877 Nov 25 19:11 agis_schedconf.cvmfs.json
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc   1516240 Nov 25 19:11 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:20:59] drwx------. 5 boinc boinc      4096 Nov 25 19:11 pilot3
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc       524 Nov 25 19:16 boinc_task_state.xml
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc       998 Nov 25 19:17 memory_monitor_summary.json
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc     51492 Nov 25 19:17 log.47556161._002352.job.log.tgz.1
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc     10334 Nov 25 19:19 heartbeat.json
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc        95 Nov 25 19:19 pilot_heartbeat.json
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc      8192 Nov 25 19:20 boinc_mmap_file
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc        23 Nov 25 19:20 wrapper_checkpoint.txt
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc      4823 Nov 25 19:20 pilotlog.txt
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc    125262 Nov 25 19:20 log.47556161._002352.job.log.1
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc       186 Nov 25 19:20 output.list
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc       620 Nov 25 19:20 runtime_log
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc    194560 Nov 25 19:20 result.tar.gz
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc      8634 Nov 25 19:20 runtime_log.err
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc       646 Nov 25 19:20 bZWMDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5bJKDmczevvm.diag
[2025-11-25 19:20:59] -rw-r--r--. 1 boinc boinc     21967 Nov 25 19:20 stderr.txt
[2025-11-25 19:20:59] No HITS result produced
[2025-11-25 19:20:59]  *** Contents of shared directory: ***
[2025-11-25 19:20:59] total 402300
[2025-11-25 19:20:59] -rw-r--r--. 2 boinc boinc 411144140 Nov 25 19:11 ATLAS.root_0
[2025-11-25 19:20:59] -rw-r--r--. 2 boinc boinc     15847 Nov 25 19:11 start_atlas.sh
[2025-11-25 19:20:59] -rw-r--r--. 2 boinc boinc    590104 Nov 25 19:11 input.tar.gz
[2025-11-25 19:20:59] -rw-------. 1 boinc boinc    194560 Nov 25 19:20 result.tar.gz
19:21:01 (1518566): run_atlas exited; CPU time 60.856686
19:21:01 (1518566): called boinc_finish(0)

</stderr_txt>
]]>

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