Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:13:06 (3836240): wrapper (7.7.26015): starting
22:13:06 (3836240): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 22:13:06] Arguments: --nthreads 8
[2025-11-25 22:13:06] Threads: 8
[2025-11-25 22:13:06] Checking for CVMFS
[2025-11-25 22:13:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:13:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:13:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:13:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:13:09] 2.13.3.0 11334 29495 337360 153306 3 323 21476388 32935937 28735 16776704 0 126980970 99.505 170914676 41145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:13:09] CVMFS is ok
[2025-11-25 22:13:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:13:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:13:09] Further information can be found at the LHC@home message board.
[2025-11-25 22:13:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:13:09] Checking for apptainer binary...
[2025-11-25 22:13:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:13:09] Running /usr/bin/apptainer --version
[2025-11-25 22:13:09] apptainer version 1.4.4-1.el9
[2025-11-25 22:13:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:13:09] c6-4-5-2.aglt2.org
[2025-11-25 22:13:09] apptainer works
[2025-11-25 22:13:09] Set ATHENA_PROC_NUMBER=8
[2025-11-25 22:13:09] Set ATHENA_CORE_NUMBER=8
[2025-11-25 22:13:09] Starting ATLAS job with PandaID=6897488124
[2025-11-25 22:13:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:09:58]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:09:58] 2025-11-26 22:09:04,718 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:09:58] 2025-11-26 22:09:04,723 | INFO     | sum of square deviations: 429834505987.9318
[2025-11-26 17:09:58] 2025-11-26 22:09:04,795 | INFO     | sum of deviations: 2861791825239.744
[2025-11-26 17:09:58] 2025-11-26 22:09:04,795 | INFO     | mean x: 1764160910.695964
[2025-11-26 17:09:58] 2025-11-26 22:09:04,795 | INFO     | mean y: 2935837.742600897
[2025-11-26 17:09:58] 2025-11-26 22:09:04,796 | INFO     | intersect: -11742657413.393362
[2025-11-26 17:09:58] 2025-11-26 22:09:04,797 | INFO     | chi2: 9.550801247012005
[2025-11-26 17:09:58] 2025-11-26 22:09:04,802 | INFO     | sum of square deviations: 424078085892.9993
[2025-11-26 17:09:58] 2025-11-26 22:09:04,860 | INFO     | sum of deviations: 3268497673258.5444
[2025-11-26 17:09:58] 2025-11-26 22:09:04,861 | INFO     | mean x: 1764160758.199099
[2025-11-26 17:09:58] 2025-11-26 22:09:04,861 | INFO     | mean y: 2946612.345945946
[2025-11-26 17:09:58] 2025-11-26 22:09:04,861 | INFO     | intersect: -13593972269.43439
[2025-11-26 17:09:58] 2025-11-26 22:09:04,862 | INFO     | chi2: 5.970991727080558
[2025-11-26 17:09:58] 2025-11-26 22:09:04,862 | INFO     | current chi2=5.970991727080558 (change=37.48177171052953 %)
[2025-11-26 17:09:58] 2025-11-26 22:09:04,867 | INFO     | sum of square deviations: 418373294673.044
[2025-11-26 17:09:58] 2025-11-26 22:09:04,907 | INFO     | sum of deviations: 3504878951398.1685
[2025-11-26 17:09:58] 2025-11-26 22:09:04,907 | INFO     | mean x: 1764160605.7022624
[2025-11-26 17:09:58] 2025-11-26 22:09:04,907 | INFO     | mean y: 2952926.292307692
[2025-11-26 17:09:58] 2025-11-26 22:09:04,907 | INFO     | intersect: -14776119859.9949
[2025-11-26 17:09:58] 2025-11-26 22:09:04,908 | INFO     | chi2: 4.474794349821668
[2025-11-26 17:09:58] 2025-11-26 22:09:04,913 | INFO     | current chi2=4.474794349821668 (change=25.05777005975584 %)
[2025-11-26 17:09:58] 2025-11-26 22:09:04,914 | INFO     | sum of square deviations: 412719832482.9777
[2025-11-26 17:09:58] 2025-11-26 22:09:04,958 | INFO     | sum of deviations: 3643532642611.816
[2025-11-26 17:09:58] 2025-11-26 22:09:04,958 | INFO     | mean x: 1764160453.2045455
[2025-11-26 17:09:58] 2025-11-26 22:09:04,958 | INFO     | mean y: 2956664.4363636365
[2025-11-26 17:09:58] 2025-11-26 22:09:04,959 | INFO     | intersect: -15571231179.615751
[2025-11-26 17:09:58] 2025-11-26 22:09:04,960 | INFO     | chi2: 3.8762247856470524
[2025-11-26 17:09:58] 2025-11-26 22:09:04,960 | INFO     | current chi2=3.8762247856470524 (change=13.37647090303647 %)
[2025-11-26 17:09:58] 2025-11-26 22:09:04,960 | INFO     | right removable region: 1099
[2025-11-26 17:09:58] 2025-11-26 22:09:04,961 | INFO     | sum of square deviations: 424077612532.9996
[2025-11-26 17:09:58] 2025-11-26 22:09:04,998 | INFO     | sum of deviations: 2456264145412.9375
[2025-11-26 17:09:58] 2025-11-26 22:09:05,003 | INFO     | mean x: 1764161063.199099
[2025-11-26 17:09:58] 2025-11-26 22:09:05,003 | INFO     | mean y: 2946575.3351351353
[2025-11-26 17:09:58] 2025-11-26 22:09:05,003 | INFO     | intersect: -10215101815.352602
[2025-11-26 17:09:58] 2025-11-26 22:09:05,004 | INFO     | chi2: 6.263856511141397
[2025-11-26 17:09:58] 2025-11-26 22:09:05,004 | INFO     | current chi2=6.263856511141397 (change=34.4153820277533 %)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,005 | INFO     | sum of square deviations: 418372686623.0442
[2025-11-26 17:09:58] 2025-11-26 22:09:05,045 | INFO     | sum of deviations: 2322248662719.966
[2025-11-26 17:09:58] 2025-11-26 22:09:05,046 | INFO     | mean x: 1764161215.6977375
[2025-11-26 17:09:58] 2025-11-26 22:09:05,046 | INFO     | mean y: 2950154.54479638
[2025-11-26 17:09:58] 2025-11-26 22:09:05,046 | INFO     | intersect: -9789326337.127224
[2025-11-26 17:09:58] 2025-11-26 22:09:05,047 | INFO     | chi2: 5.961436834135535
[2025-11-26 17:09:58] 2025-11-26 22:09:05,047 | INFO     | current chi2=5.961436834135535 (change=4.828010930134727 %)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,047 | INFO     | left removable region: 20
[2025-11-26 17:09:58] 2025-11-26 22:09:05,048 | INFO     | sum of square deviations: 389530749205.90735
[2025-11-26 17:09:58] 2025-11-26 22:09:05,082 | INFO     | sum of deviations: 2963895465913.9062
[2025-11-26 17:09:58] 2025-11-26 22:09:05,082 | INFO     | mean x: 1764161032.7015755
[2025-11-26 17:09:58] 2025-11-26 22:09:05,082 | INFO     | mean y: 2976021.8164967564
[2025-11-26 17:09:58] 2025-11-26 22:09:05,082 | INFO     | intersect: -13420325980.979277
[2025-11-26 17:09:58] 2025-11-26 22:09:05,083 | INFO     | chi2: 0.13180699824876593
[2025-11-26 17:09:58] 2025-11-26 22:09:05,083 | INFO     | current memory leak: 7.61 B/s (using 1079 data points, chi2=0.13)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | could have reported an average CPU frequency of 3132 MHz (41 samples)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | ..............................
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | . Timing measurements:
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | . get job = 0 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | . initial setup = 4 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | . payload setup = 34 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,090 | INFO     | . stage-in = 0 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,091 | INFO     | . payload execution = 68003 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,091 | INFO     | . stage-out = 5 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,091 | INFO     | . log creation = 1 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,091 | INFO     | ..............................
[2025-11-26 17:09:58] 2025-11-26 22:09:05,265 | INFO     | 
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | job summary report
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | --------------------------------------------------
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | PanDA job id: 6897488124
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | task id: 47556161
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | errors: (none)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | pilot state: finished 
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | transexitcode: 0
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | exeerrorcode: 0
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | exeerrordiag: 
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | exitcode: 0
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | exitmsg: OK
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | cpuconsumptiontime: 232449 s
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | nevents: 1000
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | neventsw: 0
[2025-11-26 17:09:58] 2025-11-26 22:09:05,266 | INFO     | pid: 3853240
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | pgrp: 3853240
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | corecount: 8
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | event service: False
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | sizes: {0: 2284265, 1: 2284265, 12: 2284293, 19: 2284583, 23: 2284611, 68041: 2341309, 68042: 2341436, 68049: 2350514, 68050: 2350570, 68067: 2350912}
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | --------------------------------------------------
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | 
[2025-11-26 17:09:58] 2025-11-26 22:09:05,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 17:09:58] 2025-11-26 22:09:05,309 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:09:58] 2025-11-26 22:09:05,311 | INFO     | job 6897488124 has completed (purged errors)
[2025-11-26 17:09:58] 2025-11-26 22:09:05,311 | INFO     | overall cleanup function is called
[2025-11-26 17:09:58] 2025-11-26 22:09:06,214 | INFO     | PID=3843510 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 17:09:58] 2025-11-26 22:09:06,214 | INFO     | .. there are 46 such processes running
[2025-11-26 17:09:58] 2025-11-26 22:09:06,340 | INFO     | --- collectZombieJob: --- 10, [3853240]
[2025-11-26 17:09:58] 2025-11-26 22:09:06,340 | INFO     | zombie collector waiting for pid 3853240
[2025-11-26 17:09:58] 2025-11-26 22:09:06,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:09:58] 2025-11-26 22:09:06,340 | INFO     | collected zombie processes
[2025-11-26 17:09:58] 2025-11-26 22:09:06,340 | INFO     | will attempt to kill all subprocesses of pid=3853240
[2025-11-26 17:09:58] 2025-11-26 22:09:06,733 | INFO     | process IDs to be killed: [3853240] (in reverse order)
[2025-11-26 17:09:58] 2025-11-26 22:09:06,926 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:09:58] 2025-11-26 22:09:06,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:09:58] 2025-11-26 22:09:06,951 | INFO     | did not find any defunct processes belonging to 3853240
[2025-11-26 17:09:58] 2025-11-26 22:09:06,967 | INFO     | did not find any defunct processes belonging to 3853240
[2025-11-26 17:09:58] 2025-11-26 22:09:06,970 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:09:58] 2025-11-26 22:09:06,970 | INFO     | ready for new job
[2025-11-26 17:09:58] 2025-11-26 22:09:06,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:09:58] 2025-11-26 22:09:06,981 | INFO     | ***************************************
[2025-11-26 17:09:58] 2025-11-26 22:09:06,981 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:09:58] 2025-11-26 22:09:06,981 | INFO     | ***************************************
[2025-11-26 17:09:58] 2025-11-26 22:09:06,981 | INFO     | 
[2025-11-26 17:09:58] 2025-11-26 22:09:06,985 | INFO     | architecture information:
[2025-11-26 17:09:58] 2025-11-26 22:09:06,989 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:09:58] 2025-11-26 22:09:07,035 | INFO     | cat /etc/os-release:
[2025-11-26 17:09:58] NAME="CentOS Linux"
[2025-11-26 17:09:58] VERSION="7 (Core)"
[2025-11-26 17:09:58] ID="centos"
[2025-11-26 17:09:58] ID_LIKE="rhel fedora"
[2025-11-26 17:09:58] VERSION_ID="7"
[2025-11-26 17:09:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:09:58] ANSI_COLOR="0;31"
[2025-11-26 17:09:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:09:58] HOME_URL="https://www.centos.org/"
[2025-11-26 17:09:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:09:58] 
[2025-11-26 17:09:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:09:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:09:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:09:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:09:58] 
[2025-11-26 17:09:58] 2025-11-26 22:09:07,035 | INFO     | ***************************************
[2025-11-26 17:09:58] 2025-11-26 22:09:07,538 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 17:09:58] 2025-11-26 22:09:07,592 | INFO     | sufficient remaining disk space (69366448128 B)
[2025-11-26 17:09:58] 2025-11-26 22:09:07,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:09:58] 2025-11-26 22:09:07,592 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:09:58] 2025-11-26 22:09:07,592 | INFO     | update_server=False
[2025-11-26 17:09:58] 2025-11-26 22:09:07,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:09:58] 2025-11-26 22:09:07,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:09:58] 2025-11-26 22:09:07,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:09:58] 2025-11-26 22:09:07,594 | INFO     | aborting loop
[2025-11-26 17:09:58] 2025-11-26 22:09:07,765 | INFO     | all data control threads have been joined
[2025-11-26 17:09:58] 2025-11-26 22:09:08,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:09:58] 2025-11-26 22:09:08,599 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:08,599 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:08,689 | INFO     | [job] validate thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:08,711 | INFO     | all payload control threads have been joined
[2025-11-26 17:09:58] 2025-11-26 22:09:08,771 | INFO     | [data] control thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:09,046 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:09,078 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:09,147 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:09,216 | INFO     | all job control threads have been joined
[2025-11-26 17:09:58] 2025-11-26 22:09:09,327 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:09,609 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:09,717 | INFO     | [payload] control thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:10,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:10,042 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:10,056 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:10,222 | INFO     | [job] control thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:10,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:09:58] 2025-11-26 22:09:11,288 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:11,601 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:09:58] 2025-11-26 22:09:39,160 | INFO     | PID=3843510 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:09:58] 2025-11-26 22:09:39,160 | INFO     | .. there are 45 such processes running
[2025-11-26 17:09:58] 2025-11-26 22:09:39,160 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:09:58] 2025-11-26 22:09:39,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:09:58] 2025-11-26 22:09:39,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:09:58] 2025-11-26 22:09:52,596 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:09:58] 2025-11-26 22:09:53,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690467837760)>', '<ExcThread(monitor, started 140689815881472)>']
[2025-11-26 17:09:58] 2025-11-26 22:09:54,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:09:58] 2025-11-26 22:09:54,250 | INFO     | [monitor] control thread has ended
[2025-11-26 17:09:58] 2025-11-26 22:09:58,441 | INFO     | all workflow threads have been joined
[2025-11-26 17:09:58] 2025-11-26 22:09:58,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:09:58] 2025-11-26 22:09:58,441 | INFO     | traces error code: 0
[2025-11-26 17:09:58] 2025-11-26 22:09:58,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:09:58] 2025-11-26 22:09:58,609 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:09:58] 2025-11-26 22:09:58,622 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:09:58] 2025-11-26 22:09:58,633 [wrapper] pilotpid: 3843510
[2025-11-26 17:09:58] 2025-11-26 22:09:58,639 [wrapper] Pilot exit status: 0
[2025-11-26 17:09:58] 2025-11-26 22:09:58,676 [wrapper] pandaids: 6897488124
[2025-11-26 17:09:58] 2025-11-26 22:09:58,750 [wrapper] cleanup supervisor_pilot 1306630 3843511
[2025-11-26 17:09:58] 2025-11-26 22:09:58,753 [wrapper] Test setup, not cleaning
[2025-11-26 17:09:58] 2025-11-26 22:09:58,757 [wrapper] apfmon messages muted
[2025-11-26 17:09:58] 2025-11-26 22:09:58,760 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:09:58] 2025-11-26 22:09:58,762 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:09:58]  *** Error codes and diagnostics ***
[2025-11-26 17:09:58]     "exeErrorCode": 0,
[2025-11-26 17:09:58]     "exeErrorDiag": "",
[2025-11-26 17:09:58]     "pilotErrorCode": 0,
[2025-11-26 17:09:58]     "pilotErrorDiag": "",
[2025-11-26 17:09:58]  *** Listing of results directory ***
[2025-11-26 17:09:58] total 1326588
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 17:09:58] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:09:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:13 run_atlas
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:13 job.xml
[2025-11-26 17:09:58] -rw-r--r--. 2 boincer umatlas 410008829 Nov 25 22:13 EVNT.47483658._002259.pool.root.1
[2025-11-26 17:09:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:13 start_atlas.sh
[2025-11-26 17:09:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:13 shared
[2025-11-26 17:09:58] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 22:13 input.tar.gz
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:13 boinc_lockfile
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:13 pandaJob.out
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas        57 Nov 25 22:13 setup.sh.local
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas    991877 Nov 25 22:13 agis_schedconf.cvmfs.json
[2025-11-26 17:09:58] drwx------. 5 boincer umatlas      4096 Nov 25 22:13 pilot3
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas       533 Nov 26 16:47 boinc_task_state.xml
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas      6876 Nov 26 17:00 init_data.xml
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas 922316114 Nov 26 17:08 HITS.47556161._002425.pool.root.1
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas      1058 Nov 26 17:08 memory_monitor_summary.json
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:08 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas   2245319 Nov 26 17:08 log.47556161._002425.job.log.tgz.1
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas        95 Nov 26 17:08 pilot_heartbeat.json
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas      8621 Nov 26 17:09 heartbeat.json
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:09 boinc_mmap_file
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:09 wrapper_checkpoint.txt
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas      4824 Nov 26 17:09 pilotlog.txt
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas   8846116 Nov 26 17:09 log.47556161._002425.job.log.1
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas       353 Nov 26 17:09 output.list
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:09 runtime_log
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas  11110400 Nov 26 17:09 result.tar.gz
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 17:09 runtime_log.err
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas       660 Nov 26 17:09 EFuLDmMXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9WMKDmDWcvpm.diag
[2025-11-26 17:09:58] -rw-r--r--. 1 boincer umatlas     21270 Nov 26 17:09 stderr.txt
[2025-11-26 17:09:58] HITS file was successfully produced:
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas 922316114 Nov 26 17:08 shared/HITS.pool.root.1
[2025-11-26 17:09:58]  *** Contents of shared directory: ***
[2025-11-26 17:09:58] total 1312552
[2025-11-26 17:09:58] -rw-r--r--. 2 boincer umatlas 410008829 Nov 25 22:13 ATLAS.root_0
[2025-11-26 17:09:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:13 start_atlas.sh
[2025-11-26 17:09:58] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 22:13 input.tar.gz
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas 922316114 Nov 26 17:08 HITS.pool.root.1
[2025-11-26 17:09:58] -rw-------. 1 boincer umatlas  11110400 Nov 26 17:09 result.tar.gz
17:10:20 (3836240): run_atlas exited; CPU time 234071.679475
17:10:20 (3836240): called boinc_finish(0)

</stderr_txt>
]]>

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