Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:05 (2755095): wrapper (7.7.26015): starting
00:00:05 (2755095): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:05] Arguments: --nthreads 9
[2025-11-26 00:00:05] Threads: 9
[2025-11-26 00:00:05] Checking for CVMFS
[2025-11-26 00:00:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:07] 2.13.3.0 11338 29467 240864 153309 2 535 26534915 32935936 44588 16776704 0 143385571 99.519 174026360 38971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:00:07] CVMFS is ok
[2025-11-26 00:00:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:07] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:07] Checking for apptainer binary...
[2025-11-26 00:00:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:07] Running /usr/bin/apptainer --version
[2025-11-26 00:00:07] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:07] c7-3-17.aglt2.org
[2025-11-26 00:00:07] apptainer works
[2025-11-26 00:00:07] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:07] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:07] Starting ATLAS job with PandaID=6897488112
[2025-11-26 00:00:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:25:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:25:18] 2025-11-26 18:24:22,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,213 | INFO     | time since job start (48213s) is within the limit (172800.0s)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,782 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 13:25:18] 2025-11-26 18:24:24,787 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3152.6510833333327
[2025-11-26 13:25:18] 2025-11-26 18:24:24,802 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6897488112/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,803 | INFO     | extracted standard info from prmon json
[2025-11-26 13:25:18] 2025-11-26 18:24:24,803 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:25:18] 2025-11-26 18:24:24,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:25:18] 2025-11-26 18:24:24,814 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:25:18] 2025-11-26 18:24:24,814 | INFO     | sum of square deviations: 152302778604.32968
[2025-11-26 13:25:18] 2025-11-26 18:24:24,828 | INFO     | sum of deviations: 1533710260421.3384
[2025-11-26 13:25:18] 2025-11-26 18:24:24,828 | INFO     | mean x: 1764157363.9708493
[2025-11-26 13:25:18] 2025-11-26 18:24:24,828 | INFO     | mean y: 2983619.0583016477
[2025-11-26 13:25:18] 2025-11-26 18:24:24,829 | INFO     | intersect: -17762327525.718376
[2025-11-26 13:25:18] 2025-11-26 18:24:24,829 | INFO     | chi2: 8.166953776076703
[2025-11-26 13:25:18] 2025-11-26 18:24:24,830 | INFO     | sum of square deviations: 149425823399.58694
[2025-11-26 13:25:18] 2025-11-26 18:24:24,843 | INFO     | sum of deviations: 1790327673815.0425
[2025-11-26 13:25:18] 2025-11-26 18:24:24,843 | INFO     | mean x: 1764157211.4770408
[2025-11-26 13:25:18] 2025-11-26 18:24:24,843 | INFO     | mean y: 2997211.863520408
[2025-11-26 13:25:18] 2025-11-26 18:24:24,843 | INFO     | intersect: -21134041921.068928
[2025-11-26 13:25:18] 2025-11-26 18:24:24,844 | INFO     | chi2: 5.257394525565743
[2025-11-26 13:25:18] 2025-11-26 18:24:24,844 | INFO     | current chi2=5.257394525565743 (change=35.62600365186191 %)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,845 | INFO     | sum of square deviations: 146585333994.78314
[2025-11-26 13:25:18] 2025-11-26 18:24:24,860 | INFO     | sum of deviations: 1882488371855.408
[2025-11-26 13:25:18] 2025-11-26 18:24:24,860 | INFO     | mean x: 1764157058.983312
[2025-11-26 13:25:18] 2025-11-26 18:24:24,860 | INFO     | mean y: 3002155.3388960203
[2025-11-26 13:25:18] 2025-11-26 18:24:24,860 | INFO     | intersect: -22652778332.093166
[2025-11-26 13:25:18] 2025-11-26 18:24:24,861 | INFO     | chi2: 4.73423493947229
[2025-11-26 13:25:18] 2025-11-26 18:24:24,861 | INFO     | current chi2=4.73423493947229 (change=9.950928802269331 %)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,861 | INFO     | right removable region: 778
[2025-11-26 13:25:18] 2025-11-26 18:24:24,862 | INFO     | sum of square deviations: 149425356139.587
[2025-11-26 13:25:18] 2025-11-26 18:24:24,874 | INFO     | sum of deviations: 1212281039502.5908
[2025-11-26 13:25:18] 2025-11-26 18:24:24,874 | INFO     | mean x: 1764157516.4770408
[2025-11-26 13:25:18] 2025-11-26 18:24:24,874 | INFO     | mean y: 3000651.1160714286
[2025-11-26 13:25:18] 2025-11-26 18:24:24,875 | INFO     | intersect: -14309528113.568638
[2025-11-26 13:25:18] 2025-11-26 18:24:24,875 | INFO     | chi2: 4.197422390849417
[2025-11-26 13:25:18] 2025-11-26 18:24:24,875 | INFO     | current chi2=4.197422390849417 (change=48.60479799524709 %)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,876 | INFO     | sum of square deviations: 146584542827.67126
[2025-11-26 13:25:18] 2025-11-26 18:24:24,888 | INFO     | sum of deviations: 1107650196146.7078
[2025-11-26 13:25:18] 2025-11-26 18:24:24,889 | INFO     | mean x: 1764157668.979461
[2025-11-26 13:25:18] 2025-11-26 18:24:24,889 | INFO     | mean y: 3006260.356867779
[2025-11-26 13:25:18] 2025-11-26 18:24:24,889 | INFO     | intersect: -13327659786.58149
[2025-11-26 13:25:18] 2025-11-26 18:24:24,889 | INFO     | chi2: 3.789462746609717
[2025-11-26 13:25:18] 2025-11-26 18:24:24,890 | INFO     | current chi2=3.789462746609717 (change=9.719289750992703 %)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,890 | INFO     | left removable region: 20
[2025-11-26 13:25:18] 2025-11-26 18:24:24,890 | INFO     | sum of square deviations: 135046979179.4669
[2025-11-26 13:25:18] 2025-11-26 18:24:24,902 | INFO     | sum of deviations: 1343878090835.764
[2025-11-26 13:25:18] 2025-11-26 18:24:24,902 | INFO     | mean x: 1764157638.4934037
[2025-11-26 13:25:18] 2025-11-26 18:24:24,902 | INFO     | mean y: 3032621.653034301
[2025-11-26 13:25:18] 2025-11-26 18:24:24,903 | INFO     | intersect: -17552434472.514397
[2025-11-26 13:25:18] 2025-11-26 18:24:24,903 | INFO     | chi2: 0.16415024444021403
[2025-11-26 13:25:18] 2025-11-26 18:24:24,903 | INFO     | current memory leak: 9.95 B/s (using 758 data points, chi2=0.16)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,904 | INFO     | could have reported an average CPU frequency of 3209 MHz (30 samples)
[2025-11-26 13:25:18] 2025-11-26 18:24:24,904 | INFO     | ..............................
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . Timing measurements:
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . get job = 0 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . initial setup = 4 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . payload setup = 24 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . stage-in = 0 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . payload execution = 48129 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . stage-out = 3 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | . log creation = 0 s
[2025-11-26 13:25:18] 2025-11-26 18:24:24,905 | INFO     | ..............................
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | 
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | job summary report
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | --------------------------------------------------
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | PanDA job id: 6897488112
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | task id: 47556161
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | errors: (none)
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | pilot state: finished 
[2025-11-26 13:25:18] 2025-11-26 18:24:25,016 | INFO     | transexitcode: 0
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | exeerrorcode: 0
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | exeerrordiag: 
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | exitcode: 0
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | exitmsg: OK
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | cpuconsumptiontime: 199736 s
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | nevents: 1000
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | neventsw: 0
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | pid: 2773576
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | pgrp: 2773576
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | corecount: 9
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | event service: False
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 18: 2284583, 23: 2284611, 48157: 2333826, 48161: 2342820, 48164: 2342876, 48174: 2343122}
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | --------------------------------------------------
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | 
[2025-11-26 13:25:18] 2025-11-26 18:24:25,017 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:25:18] 2025-11-26 18:24:25,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:25:18] 2025-11-26 18:24:25,045 | INFO     | job 6897488112 has completed (purged errors)
[2025-11-26 13:25:18] 2025-11-26 18:24:25,045 | INFO     | overall cleanup function is called
[2025-11-26 13:25:18] 2025-11-26 18:24:26,064 | INFO     | --- collectZombieJob: --- 10, [2773576]
[2025-11-26 13:25:18] 2025-11-26 18:24:26,065 | INFO     | zombie collector waiting for pid 2773576
[2025-11-26 13:25:18] 2025-11-26 18:24:26,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:25:18] 2025-11-26 18:24:26,065 | INFO     | collected zombie processes
[2025-11-26 13:25:18] 2025-11-26 18:24:26,065 | INFO     | will attempt to kill all subprocesses of pid=2773576
[2025-11-26 13:25:18] 2025-11-26 18:24:26,826 | INFO     | process IDs to be killed: [2773576] (in reverse order)
[2025-11-26 13:25:18] 2025-11-26 18:24:27,075 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:25:18] 2025-11-26 18:24:27,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:25:18] 2025-11-26 18:24:27,101 | INFO     | did not find any defunct processes belonging to 2773576
[2025-11-26 13:25:18] 2025-11-26 18:24:27,129 | INFO     | did not find any defunct processes belonging to 2773576
[2025-11-26 13:25:18] 2025-11-26 18:24:27,130 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:25:18] 2025-11-26 18:24:27,131 | INFO     | ready for new job
[2025-11-26 13:25:18] 2025-11-26 18:24:27,131 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:25:18] 2025-11-26 18:24:27,133 | INFO     | ***************************************
[2025-11-26 13:25:18] 2025-11-26 18:24:27,134 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:25:18] 2025-11-26 18:24:27,134 | INFO     | ***************************************
[2025-11-26 13:25:18] 2025-11-26 18:24:27,134 | INFO     | 
[2025-11-26 13:25:18] 2025-11-26 18:24:27,138 | INFO     | architecture information:
[2025-11-26 13:25:18] 2025-11-26 18:24:27,139 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:25:18] 2025-11-26 18:24:27,156 | INFO     | cat /etc/os-release:
[2025-11-26 13:25:18] NAME="CentOS Linux"
[2025-11-26 13:25:18] VERSION="7 (Core)"
[2025-11-26 13:25:18] ID="centos"
[2025-11-26 13:25:18] ID_LIKE="rhel fedora"
[2025-11-26 13:25:18] VERSION_ID="7"
[2025-11-26 13:25:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:25:18] ANSI_COLOR="0;31"
[2025-11-26 13:25:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:25:18] HOME_URL="https://www.centos.org/"
[2025-11-26 13:25:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:25:18] 
[2025-11-26 13:25:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:25:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:25:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:25:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:25:18] 
[2025-11-26 13:25:18] 2025-11-26 18:24:27,156 | INFO     | ***************************************
[2025-11-26 13:25:18] 2025-11-26 18:24:27,659 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 13:25:18] 2025-11-26 18:24:27,681 | INFO     | sufficient remaining disk space (66375909376 B)
[2025-11-26 13:25:18] 2025-11-26 18:24:27,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:25:18] 2025-11-26 18:24:27,682 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:25:18] 2025-11-26 18:24:27,682 | INFO     | update_server=False
[2025-11-26 13:25:18] 2025-11-26 18:24:27,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:25:18] 2025-11-26 18:24:27,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:25:18] 2025-11-26 18:24:27,895 | INFO     | all job control threads have been joined
[2025-11-26 13:25:18] 2025-11-26 18:24:28,616 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:25:18] 2025-11-26 18:24:28,617 | INFO     | aborting loop
[2025-11-26 13:25:18] 2025-11-26 18:24:28,678 | INFO     | all data control threads have been joined
[2025-11-26 13:25:18] 2025-11-26 18:24:28,689 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:28,785 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:28,829 | INFO     | all payload control threads have been joined
[2025-11-26 13:25:18] 2025-11-26 18:24:28,901 | INFO     | [job] control thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,115 | INFO     | [job] validate thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,208 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,215 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,503 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,622 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,684 | INFO     | [data] control thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,696 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,837 | INFO     | [payload] control thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,964 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:29,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:25:18] 2025-11-26 18:24:30,070 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:30,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:25:18] 2025-11-26 18:24:31,004 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:34,635 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:38,552 | INFO     | job.realtimelogging is not enabled
[2025-11-26 13:25:18] 2025-11-26 18:24:39,567 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:25:18] 2025-11-26 18:24:58,134 | INFO     | PID=2759954 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 13:25:18] 2025-11-26 18:24:58,134 | INFO     | .. there are 61 such processes running
[2025-11-26 13:25:18] 2025-11-26 18:24:58,134 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:25:18] 2025-11-26 18:24:58,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:25:18] 2025-11-26 18:24:58,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:25:18] 2025-11-26 18:25:12,919 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:25:18] 2025-11-26 18:25:13,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551066801984)>', '<ExcThread(monitor, started 140550439163648)>']
[2025-11-26 13:25:18] 2025-11-26 18:25:13,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:25:18] 2025-11-26 18:25:13,273 | INFO     | [monitor] control thread has ended
[2025-11-26 13:25:18] 2025-11-26 18:25:18,167 | INFO     | all workflow threads have been joined
[2025-11-26 13:25:18] 2025-11-26 18:25:18,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:25:18] 2025-11-26 18:25:18,168 | INFO     | traces error code: 0
[2025-11-26 13:25:18] 2025-11-26 18:25:18,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:25:18] 2025-11-26 18:25:18,282 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:25:18] 2025-11-26 18:25:18,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:25:18] 2025-11-26 18:25:18,293 [wrapper] pilotpid: 2759954
[2025-11-26 13:25:18] 2025-11-26 18:25:18,297 [wrapper] Pilot exit status: 0
[2025-11-26 13:25:18] 2025-11-26 18:25:18,310 [wrapper] pandaids: 6897488112
[2025-11-26 13:25:18] 2025-11-26 18:25:18,456 [wrapper] cleanup supervisor_pilot 3542395 2759955
[2025-11-26 13:25:18] 2025-11-26 18:25:18,462 [wrapper] Test setup, not cleaning
[2025-11-26 13:25:18] 2025-11-26 18:25:18,467 [wrapper] apfmon messages muted
[2025-11-26 13:25:18] 2025-11-26 18:25:18,469 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:25:18] 2025-11-26 18:25:18,472 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:25:18]  *** Error codes and diagnostics ***
[2025-11-26 13:25:18]     "exeErrorCode": 0,
[2025-11-26 13:25:18]     "exeErrorDiag": "",
[2025-11-26 13:25:18]     "pilotErrorCode": 0,
[2025-11-26 13:25:18]     "pilotErrorDiag": "",
[2025-11-26 13:25:18]  *** Listing of results directory ***
[2025-11-26 13:25:18] total 1316164
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 13:25:18] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:25:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-26 13:25:18] -rw-r--r--. 2 boincer umatlas 410770182 Nov 26 00:00 EVNT.47483658._002258.pool.root.1
[2025-11-26 13:25:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 13:25:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-26 13:25:18] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:00 input.tar.gz
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:00 pandaJob.out
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas    991877 Nov 26 00:00 agis_schedconf.cvmfs.json
[2025-11-26 13:25:18] drwx------. 5 boincer umatlas      4096 Nov 26 00:00 pilot3
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas       533 Nov 26 13:08 boinc_task_state.xml
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas      6948 Nov 26 13:21 init_data.xml
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas 915481926 Nov 26 13:23 HITS.47556161._002413.pool.root.1
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas      1070 Nov 26 13:24 memory_monitor_summary.json
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas   1516240 Nov 26 13:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas   2140407 Nov 26 13:24 log.47556161._002413.job.log.tgz.1
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas        95 Nov 26 13:24 pilot_heartbeat.json
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas      8627 Nov 26 13:24 heartbeat.json
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas        29 Nov 26 13:25 wrapper_checkpoint.txt
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas      4896 Nov 26 13:25 pilotlog.txt
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 13:25 boinc_mmap_file
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas   6648239 Nov 26 13:25 log.47556161._002413.job.log.1
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas       353 Nov 26 13:25 output.list
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas       620 Nov 26 13:25 runtime_log
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas   8806400 Nov 26 13:25 result.tar.gz
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 13:25 runtime_log.err
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas       663 Nov 26 13:25 i2fLDmMXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyWMKDmnCYpRm.diag
[2025-11-26 13:25:18] -rw-r--r--. 1 boincer umatlas     21329 Nov 26 13:25 stderr.txt
[2025-11-26 13:25:18] HITS file was successfully produced:
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas 915481926 Nov 26 13:23 shared/HITS.pool.root.1
[2025-11-26 13:25:18]  *** Contents of shared directory: ***
[2025-11-26 13:25:18] total 1304376
[2025-11-26 13:25:18] -rw-r--r--. 2 boincer umatlas 410770182 Nov 26 00:00 ATLAS.root_0
[2025-11-26 13:25:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-26 13:25:18] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 00:00 input.tar.gz
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas 915481926 Nov 26 13:23 HITS.pool.root.1
[2025-11-26 13:25:18] -rw-------. 1 boincer umatlas   8806400 Nov 26 13:25 result.tar.gz
13:25:19 (2755095): run_atlas exited; CPU time 200751.775050
13:25:19 (2755095): called boinc_finish(0)

</stderr_txt>
]]>

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