Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:10:45 (3291817): wrapper (7.7.26015): starting
22:10:45 (3291817): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 22:10:45] Arguments: --nthreads 10
[2025-11-25 22:10:45] Threads: 10
[2025-11-25 22:10:45] Checking for CVMFS
[2025-11-25 22:10:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:10:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:10:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:10:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:10:45] 2.13.3.0 16090 29444 426236 153306 0 306 20447709 32935936 54986 16776704 0 413733519 99.629 373478494 52861 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:10:45] CVMFS is ok
[2025-11-25 22:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:10:45] Further information can be found at the LHC@home message board.
[2025-11-25 22:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:10:45] Checking for apptainer binary...
[2025-11-25 22:10:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:10:45] Running /usr/bin/apptainer --version
[2025-11-25 22:10:45] apptainer version 1.4.4-1.el9
[2025-11-25 22:10:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:10:45] c7-9-15.aglt2.org
[2025-11-25 22:10:45] apptainer works
[2025-11-25 22:10:45] Set ATHENA_PROC_NUMBER=10
[2025-11-25 22:10:45] Set ATHENA_CORE_NUMBER=10
[2025-11-25 22:10:45] Starting ATLAS job with PandaID=6897487243
[2025-11-25 22:10:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:19:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:19:39] 2025-11-26 13:18:09,189 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:19:39] 2025-11-26 13:18:09,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:19:39] 2025-11-26 13:18:09,194 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:19:39] 2025-11-26 13:18:09,194 | INFO     | sum of square deviations: 65979872510.27425
[2025-11-26 08:19:39] 2025-11-26 13:18:09,198 | INFO     | sum of deviations: 179814194854.22162
[2025-11-26 08:19:39] 2025-11-26 13:18:09,199 | INFO     | mean x: 1764144873.2579565
[2025-11-26 08:19:39] 2025-11-26 13:18:09,199 | INFO     | mean y: 3159073.4271356785
[2025-11-26 08:19:39] 2025-11-26 13:18:09,199 | INFO     | intersect: -4804644851.045221
[2025-11-26 08:19:39] 2025-11-26 13:18:09,199 | INFO     | chi2: 12.697368276415219
[2025-11-26 08:19:39] 2025-11-26 13:18:09,199 | INFO     | sum of square deviations: 64336383034.566925
[2025-11-26 08:19:39] 2025-11-26 13:18:09,203 | INFO     | sum of deviations: 424810104239.2434
[2025-11-26 08:19:39] 2025-11-26 13:18:09,204 | INFO     | mean x: 1764144720.7770271
[2025-11-26 08:19:39] 2025-11-26 13:18:09,204 | INFO     | mean y: 3181806.0472972975
[2025-11-26 08:19:39] 2025-11-26 13:18:09,204 | INFO     | intersect: -11645382620.145964
[2025-11-26 08:19:39] 2025-11-26 13:18:09,204 | INFO     | chi2: 8.584491979125945
[2025-11-26 08:19:39] 2025-11-26 13:18:09,204 | INFO     | current chi2=8.584491979125945 (change=32.39156499011495 %)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,204 | INFO     | sum of square deviations: 62720428958.42251
[2025-11-26 08:19:39] 2025-11-26 13:18:09,208 | INFO     | sum of deviations: 680063634630.2351
[2025-11-26 08:19:39] 2025-11-26 13:18:09,208 | INFO     | mean x: 1764144568.2964225
[2025-11-26 08:19:39] 2025-11-26 13:18:09,208 | INFO     | mean y: 3205891.8262350936
[2025-11-26 08:19:39] 2025-11-26 13:18:09,208 | INFO     | intersect: -19125020541.767765
[2025-11-26 08:19:39] 2025-11-26 13:18:09,208 | INFO     | chi2: 4.367124603041567
[2025-11-26 08:19:39] 2025-11-26 13:18:09,208 | INFO     | current chi2=4.367124603041567 (change=49.12774554789416 %)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,209 | INFO     | sum of square deviations: 61131742159.95837
[2025-11-26 08:19:39] 2025-11-26 13:18:09,212 | INFO     | sum of deviations: 834697338085.9172
[2025-11-26 08:19:39] 2025-11-26 13:18:09,212 | INFO     | mean x: 1764144415.814433
[2025-11-26 08:19:39] 2025-11-26 13:18:09,212 | INFO     | mean y: 3220691.795532646
[2025-11-26 08:19:39] 2025-11-26 13:18:09,212 | INFO     | intersect: -24084537907.107216
[2025-11-26 08:19:39] 2025-11-26 13:18:09,213 | INFO     | chi2: 2.224313258021343
[2025-11-26 08:19:39] 2025-11-26 13:18:09,213 | INFO     | current chi2=2.224313258021343 (change=49.066869846759644 %)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,213 | INFO     | sum of square deviations: 59570019141.09193
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | sum of deviations: 826946557643.7539
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | mean x: 1764144263.3275564
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | mean y: 3219930.726169844
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | intersect: -24486499004.740295
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | chi2: 2.207685394652648
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | current chi2=2.207685394652648 (change=0.7475504319695683 %)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | right removable region: 576
[2025-11-26 08:19:39] 2025-11-26 13:18:09,217 | INFO     | sum of square deviations: 64335633229.66884
[2025-11-26 08:19:39] 2025-11-26 13:18:09,221 | INFO     | sum of deviations: 17969524242.64879
[2025-11-26 08:19:39] 2025-11-26 13:18:09,221 | INFO     | mean x: 1764145025.7736487
[2025-11-26 08:19:39] 2025-11-26 13:18:09,221 | INFO     | mean y: 3174045.810810811
[2025-11-26 08:19:39] 2025-11-26 13:18:09,221 | INFO     | intersect: -489567615.6417228
[2025-11-26 08:19:39] 2025-11-26 13:18:09,222 | INFO     | chi2: 10.738594271122375
[2025-11-26 08:19:39] 2025-11-26 13:18:09,222 | INFO     | current chi2=10.738594271122375 (change=15.426614103421546 %)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,222 | INFO     | left removable region: 10
[2025-11-26 08:19:39] 2025-11-26 13:18:09,222 | INFO     | sum of square deviations: 56227181318.69276
[2025-11-26 08:19:39] 2025-11-26 13:18:09,226 | INFO     | sum of deviations: 622693181412.4912
[2025-11-26 08:19:39] 2025-11-26 13:18:09,226 | INFO     | mean x: 1764144537.8586574
[2025-11-26 08:19:39] 2025-11-26 13:18:09,226 | INFO     | mean y: 3239745.093639576
[2025-11-26 08:19:39] 2025-11-26 13:18:09,226 | INFO     | intersect: -19533944033.0566
[2025-11-26 08:19:39] 2025-11-26 13:18:09,226 | INFO     | chi2: 0.10633906455866422
[2025-11-26 08:19:39] 2025-11-26 13:18:09,226 | INFO     | current memory leak: 11.07 B/s (using 566 data points, chi2=0.11)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | could have reported an average CPU frequency of 3799 MHz (23 samples)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | ..............................
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . Timing measurements:
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . get job = 0 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . initial setup = 2 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . payload setup = 9 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . stage-in = 0 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . payload execution = 36380 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . stage-out = 3 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | . log creation = 0 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,227 | INFO     | ..............................
[2025-11-26 08:19:39] 2025-11-26 13:18:09,456 | INFO     | 
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | job summary report
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | --------------------------------------------------
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | PanDA job id: 6897487243
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | task id: 47556161
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | errors: (none)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | pilot state: finished 
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | transexitcode: 0
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | exeerrorcode: 0
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | exeerrordiag: 
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | exitcode: 0
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | exitmsg: OK
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | cpuconsumptiontime: 140942 s
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | nevents: 1000
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | neventsw: 0
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | pid: 3328453
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | pgrp: 3328453
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | corecount: 10
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | event service: False
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | sizes: {0: 2284094, 1: 2284293, 6: 2284555, 11: 2284583, 36392: 2326187, 36397: 2335181, 36401: 2335365, 36414: 2335611}
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | --------------------------------------------------
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | 
[2025-11-26 08:19:39] 2025-11-26 13:18:09,457 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | job 6897487243 has completed (purged errors)
[2025-11-26 08:19:39] 2025-11-26 13:18:09,478 | INFO     | overall cleanup function is called
[2025-11-26 08:19:39] 2025-11-26 13:18:10,503 | INFO     | --- collectZombieJob: --- 10, [3328453]
[2025-11-26 08:19:39] 2025-11-26 13:18:10,504 | INFO     | zombie collector waiting for pid 3328453
[2025-11-26 08:19:39] 2025-11-26 13:18:10,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:19:39] 2025-11-26 13:18:10,504 | INFO     | collected zombie processes
[2025-11-26 08:19:39] 2025-11-26 13:18:10,505 | INFO     | will attempt to kill all subprocesses of pid=3328453
[2025-11-26 08:19:39] 2025-11-26 13:18:11,096 | INFO     | process IDs to be killed: [3328453] (in reverse order)
[2025-11-26 08:19:39] 2025-11-26 13:18:11,302 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:19:39] 2025-11-26 13:18:11,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:19:39] 2025-11-26 13:18:11,329 | INFO     | did not find any defunct processes belonging to 3328453
[2025-11-26 08:19:39] 2025-11-26 13:18:11,357 | INFO     | did not find any defunct processes belonging to 3328453
[2025-11-26 08:19:39] 2025-11-26 13:18:11,358 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:19:39] 2025-11-26 13:18:11,358 | INFO     | ready for new job
[2025-11-26 08:19:39] 2025-11-26 13:18:11,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:19:39] 2025-11-26 13:18:11,361 | INFO     | ***************************************
[2025-11-26 08:19:39] 2025-11-26 13:18:11,361 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:19:39] 2025-11-26 13:18:11,361 | INFO     | ***************************************
[2025-11-26 08:19:39] 2025-11-26 13:18:11,361 | INFO     | 
[2025-11-26 08:19:39] 2025-11-26 13:18:11,366 | INFO     | architecture information:
[2025-11-26 08:19:39] 2025-11-26 13:18:11,367 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:19:39] 2025-11-26 13:18:11,397 | INFO     | cat /etc/os-release:
[2025-11-26 08:19:39] NAME="CentOS Linux"
[2025-11-26 08:19:39] VERSION="7 (Core)"
[2025-11-26 08:19:39] ID="centos"
[2025-11-26 08:19:39] ID_LIKE="rhel fedora"
[2025-11-26 08:19:39] VERSION_ID="7"
[2025-11-26 08:19:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:19:39] ANSI_COLOR="0;31"
[2025-11-26 08:19:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:19:39] HOME_URL="https://www.centos.org/"
[2025-11-26 08:19:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:19:39] 
[2025-11-26 08:19:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:19:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:19:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:19:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:19:39] 
[2025-11-26 08:19:39] 2025-11-26 13:18:11,397 | INFO     | ***************************************
[2025-11-26 08:19:39] 2025-11-26 13:18:11,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 08:19:39] 2025-11-26 13:18:11,953 | INFO     | sufficient remaining disk space (63344476160 B)
[2025-11-26 08:19:39] 2025-11-26 13:18:11,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:19:39] 2025-11-26 13:18:11,953 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:19:39] 2025-11-26 13:18:11,953 | INFO     | update_server=False
[2025-11-26 08:19:39] 2025-11-26 13:18:11,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:19:39] 2025-11-26 13:18:11,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:19:39] 2025-11-26 13:18:11,954 | INFO     | aborting loop
[2025-11-26 08:19:39] 2025-11-26 13:18:12,199 | INFO     | all data control threads have been joined
[2025-11-26 08:19:39] 2025-11-26 13:18:12,714 | INFO     | all job control threads have been joined
[2025-11-26 08:19:39] 2025-11-26 13:18:12,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:19:39] 2025-11-26 13:18:12,958 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:12,959 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,091 | INFO     | all payload control threads have been joined
[2025-11-26 08:19:39] 2025-11-26 13:18:13,207 | INFO     | [data] control thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,270 | INFO     | [job] validate thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,379 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,575 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,631 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,715 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,718 | INFO     | [job] control thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,844 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:13,987 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:14,095 | INFO     | [payload] control thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:14,175 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:14,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:19:39] 2025-11-26 13:18:14,751 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:15,302 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:15,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:19:39] 2025-11-26 13:18:19,317 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:19:39] 2025-11-26 13:18:41,281 | INFO     | PID=3302103 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:19:39] 2025-11-26 13:18:41,282 | INFO     | .. there are 95 such processes running
[2025-11-26 08:19:39] 2025-11-26 13:18:41,282 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:19:39] 2025-11-26 13:18:41,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:19:39] 2025-11-26 13:18:41,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:19:39] 2025-11-26 13:19:01,990 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:19:39] 2025-11-26 13:19:03,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159434274624)>', '<ExcThread(monitor, started 140158674401024)>']
[2025-11-26 08:19:39] 2025-11-26 13:19:04,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:19:39] 2025-11-26 13:19:04,428 | INFO     | [monitor] control thread has ended
[2025-11-26 08:19:39] 2025-11-26 13:19:08,966 | INFO     | all workflow threads have been joined
[2025-11-26 08:19:39] 2025-11-26 13:19:08,966 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:19:39] 2025-11-26 13:19:08,967 | INFO     | traces error code: 0
[2025-11-26 08:19:39] 2025-11-26 13:19:08,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:19:39] 2025-11-26 13:19:09,157 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:19:39] 2025-11-26 13:19:09,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:19:39] 2025-11-26 13:19:09,192 [wrapper] pilotpid: 3302103
[2025-11-26 08:19:39] 2025-11-26 13:19:09,212 [wrapper] Pilot exit status: 0
[2025-11-26 08:19:39] 2025-11-26 13:19:09,295 [wrapper] pandaids: 6897487243
[2025-11-26 08:19:39] 2025-11-26 13:19:09,467 [wrapper] cleanup supervisor_pilot  538476 3302104
[2025-11-26 08:19:39] 2025-11-26 13:19:09,476 [wrapper] Test setup, not cleaning
[2025-11-26 08:19:39] 2025-11-26 13:19:09,479 [wrapper] apfmon messages muted
[2025-11-26 08:19:39] 2025-11-26 13:19:09,482 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:19:39] 2025-11-26 13:19:09,487 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:19:39]  *** Error codes and diagnostics ***
[2025-11-26 08:19:39]     "exeErrorCode": 0,
[2025-11-26 08:19:39]     "exeErrorDiag": "",
[2025-11-26 08:19:39]     "pilotErrorCode": 0,
[2025-11-26 08:19:39]     "pilotErrorDiag": "",
[2025-11-26 08:19:39]  *** Listing of results directory ***
[2025-11-26 08:19:39] total 1327168
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 08:19:39] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:19:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:10 run_atlas
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:10 job.xml
[2025-11-26 08:19:39] -rw-r--r--. 2 boincer umatlas 410564153 Nov 25 22:10 EVNT.47483658._002246.pool.root.1
[2025-11-26 08:19:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:10 start_atlas.sh
[2025-11-26 08:19:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:10 shared
[2025-11-26 08:19:39] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 22:10 input.tar.gz
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:10 boinc_lockfile
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:10 pandaJob.out
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas        57 Nov 25 22:10 setup.sh.local
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas    991877 Nov 25 22:10 agis_schedconf.cvmfs.json
[2025-11-26 08:19:39] drwx------. 5 boincer umatlas      4096 Nov 25 22:10 pilot3
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:02 boinc_task_state.xml
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas      7171 Nov 26 08:09 init_data.xml
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas 931199468 Nov 26 08:17 HITS.47556161._002298.pool.root.1
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas      1053 Nov 26 08:17 memory_monitor_summary.json
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas   2026489 Nov 26 08:17 log.47556161._002298.job.log.tgz.1
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas      8582 Nov 26 08:18 heartbeat.json
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas        95 Nov 26 08:18 pilot_heartbeat.json
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas      4824 Nov 26 08:19 pilotlog.txt
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas   4639153 Nov 26 08:19 log.47556161._002298.job.log.1
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas       353 Nov 26 08:19 output.list
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:19 runtime_log
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas   6686720 Nov 26 08:19 result.tar.gz
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas       659 Nov 26 08:19 ZbQLDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJbJKDm3uiYGo.diag
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas      9340 Nov 26 08:19 runtime_log.err
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:19 wrapper_checkpoint.txt
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:19 boinc_mmap_file
[2025-11-26 08:19:39] -rw-r--r--. 1 boincer umatlas     21135 Nov 26 08:19 stderr.txt
[2025-11-26 08:19:39] HITS file was successfully produced:
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas 931199468 Nov 26 08:17 shared/HITS.pool.root.1
[2025-11-26 08:19:39]  *** Contents of shared directory: ***
[2025-11-26 08:19:39] total 1317456
[2025-11-26 08:19:39] -rw-r--r--. 2 boincer umatlas 410564153 Nov 25 22:10 ATLAS.root_0
[2025-11-26 08:19:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:10 start_atlas.sh
[2025-11-26 08:19:39] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 22:10 input.tar.gz
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas 931199468 Nov 26 08:17 HITS.pool.root.1
[2025-11-26 08:19:39] -rw-------. 1 boincer umatlas   6686720 Nov 26 08:19 result.tar.gz
08:19:41 (3291817): run_atlas exited; CPU time 141495.230478
08:19:41 (3291817): called boinc_finish(0)

</stderr_txt>
]]>

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