Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:41:50 (3082450): wrapper (7.7.26015): starting
22:41:50 (3082450): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 22:41:50] Arguments: --nthreads 9
[2025-11-25 22:41:50] Threads: 9
[2025-11-25 22:41:50] Checking for CVMFS
[2025-11-25 22:41:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:41:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:41:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:41:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:41:50] 2.13.2.0 6969 36185 247400 153307 3 670 31893727 40960001 21738 16776704 0 103781356 99.615 94190486 35789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 22:41:50] CVMFS is ok
[2025-11-25 22:41:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:41:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:41:50] Further information can be found at the LHC@home message board.
[2025-11-25 22:41:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:41:50] Checking for apptainer binary...
[2025-11-25 22:41:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:41:50] Running /usr/bin/apptainer --version
[2025-11-25 22:41:50] apptainer version 1.4.4-1.el9
[2025-11-25 22:41:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:41:50] c-212-14.aglt2.org
[2025-11-25 22:41:50] apptainer works
[2025-11-25 22:41:50] Set ATHENA_PROC_NUMBER=9
[2025-11-25 22:41:50] Set ATHENA_CORE_NUMBER=9
[2025-11-25 22:41:50] Starting ATLAS job with PandaID=6897394436
[2025-11-25 22:41:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:36:49]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:36:49] 2025-11-26 23:36:06,048 | INFO     | this job has now completed (state=finished)
[2025-11-26 18:36:49] 2025-11-26 23:36:06,048 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 18:36:49] 2025-11-26 23:36:06,048 | INFO     | log transfer has been attempted: DONE
[2025-11-26 18:36:49] 2025-11-26 23:36:06,048 | INFO     | job 6897394436 has finished - writing final server update
[2025-11-26 18:36:49] 2025-11-26 23:36:06,048 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 18:36:49] 2025-11-26 23:36:06,049 | INFO     | executing command: lscpu
[2025-11-26 18:36:49] 2025-11-26 23:36:06,152 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 18:36:49] 2025-11-26 23:36:06,812 | INFO     | monitor loop #4125: job 0:6897394436 is in state 'finished'
[2025-11-26 18:36:49] 2025-11-26 23:36:06,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:36:49] 2025-11-26 23:36:07,819 | INFO     | time since job start (71633s) is within the limit (172800.0s)
[2025-11-26 18:36:49] 2025-11-26 23:36:09,317 | INFO     | monitor loop #4126: job 0:6897394436 is in state 'finished'
[2025-11-26 18:36:49] 2025-11-26 23:36:09,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:36:49] 2025-11-26 23:36:09,826 | INFO     | time since job start (71635s) is within the limit (172800.0s)
[2025-11-26 18:36:49] 2025-11-26 23:36:11,822 | INFO     | monitor loop #4127: job 0:6897394436 is in state 'finished'
[2025-11-26 18:36:49] 2025-11-26 23:36:11,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:36:49] 2025-11-26 23:36:11,836 | INFO     | time since job start (71637s) is within the limit (172800.0s)
[2025-11-26 18:36:49] 2025-11-26 23:36:12,556 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 18:36:49] 2025-11-26 23:36:12,565 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3003.4782812500002
[2025-11-26 18:36:49] 2025-11-26 23:36:12,869 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897394436/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:36:49] 2025-11-26 23:36:12,871 | INFO     | extracted standard info from prmon json
[2025-11-26 18:36:49] 2025-11-26 23:36:12,871 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:36:49] 2025-11-26 23:36:12,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:36:49] 2025-11-26 23:36:12,982 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:36:49] 2025-11-26 23:36:12,993 | INFO     | sum of square deviations: 501738173944.2929
[2025-11-26 18:36:49] 2025-11-26 23:36:13,448 | INFO     | sum of deviations: 2020312322376.8816
[2025-11-26 18:36:49] 2025-11-26 23:36:13,449 | INFO     | mean x: 1764164366.6780238
[2025-11-26 18:36:49] 2025-11-26 23:36:13,449 | INFO     | mean y: 3044605.8091993188
[2025-11-26 18:36:49] 2025-11-26 23:36:13,449 | INFO     | intersect: -7100586717.833202
[2025-11-26 18:36:49] 2025-11-26 23:36:13,572 | INFO     | chi2: 19.66164819604137
[2025-11-26 18:36:49] 2025-11-26 23:36:13,574 | INFO     | sum of square deviations: 495355513187.97217
[2025-11-26 18:36:49] 2025-11-26 23:36:13,864 | INFO     | time since job start (71639s) is within the limit (172800.0s)
[2025-11-26 18:36:49] 2025-11-26 23:36:14,049 | INFO     | sum of deviations: 2469668369138.1577
[2025-11-26 18:36:49] 2025-11-26 23:36:14,049 | INFO     | mean x: 1764164214.1873395
[2025-11-26 18:36:49] 2025-11-26 23:36:14,049 | INFO     | mean y: 3055338.1864841743
[2025-11-26 18:36:49] 2025-11-26 23:36:14,049 | INFO     | intersect: -8792446966.217337
[2025-11-26 18:36:49] 2025-11-26 23:36:14,050 | INFO     | chi2: 15.706115039496193
[2025-11-26 18:36:49] 2025-11-26 23:36:14,051 | INFO     | current chi2=15.706115039496193 (change=20.11801410088079 %)
[2025-11-26 18:36:49] 2025-11-26 23:36:14,051 | INFO     | right removable region: 1168
[2025-11-26 18:36:49] 2025-11-26 23:36:14,052 | INFO     | sum of square deviations: 495353953417.97217
[2025-11-26 18:36:49] 2025-11-26 23:36:14,078 | INFO     | sum of deviations: 1668931142684.3926
[2025-11-26 18:36:49] 2025-11-26 23:36:14,079 | INFO     | mean x: 1764164519.1873395
[2025-11-26 18:36:49] 2025-11-26 23:36:14,079 | INFO     | mean y: 3052991.080410607
[2025-11-26 18:36:49] 2025-11-26 23:36:14,079 | INFO     | intersect: -5940715271.138865
[2025-11-26 18:36:49] 2025-11-26 23:36:14,080 | INFO     | chi2: 17.397212755962048
[2025-11-26 18:36:49] 2025-11-26 23:36:14,080 | INFO     | current chi2=17.397212755962048 (change=11.51701738074653 %)
[2025-11-26 18:36:49] 2025-11-26 23:36:14,080 | INFO     | left removable region: 10
[2025-11-26 18:36:49] 2025-11-26 23:36:14,081 | INFO     | sum of square deviations: 481502173456.61835
[2025-11-26 18:36:49] 2025-11-26 23:36:14,101 | INFO     | sum of deviations: 2110274326741.885
[2025-11-26 18:36:49] 2025-11-26 23:36:14,102 | INFO     | mean x: 1764164488.701209
[2025-11-26 18:36:49] 2025-11-26 23:36:14,102 | INFO     | mean y: 3067891.011226252
[2025-11-26 18:36:49] 2025-11-26 23:36:14,102 | INFO     | intersect: -7728716582.421276
[2025-11-26 18:36:49] 2025-11-26 23:36:14,103 | INFO     | chi2: 12.739817173055032
[2025-11-26 18:36:49] 2025-11-26 23:36:14,103 | INFO     | current memory leak: 4.38 B/s (using 1158 data points, chi2=12.74)
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | could have reported an average CPU frequency of 3056 MHz (43 samples)
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | ..............................
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . Timing measurements:
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . get job = 0 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . initial setup = 3 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . payload setup = 12 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . stage-in = 0 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . payload execution = 71560 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . stage-out = 15 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,106 | INFO     | . log creation = 4 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,107 | INFO     | ..............................
[2025-11-26 18:36:49] 2025-11-26 23:36:14,927 | INFO     | 
[2025-11-26 18:36:49] 2025-11-26 23:36:14,928 | INFO     | job summary report
[2025-11-26 18:36:49] 2025-11-26 23:36:14,928 | INFO     | --------------------------------------------------
[2025-11-26 18:36:49] 2025-11-26 23:36:14,928 | INFO     | PanDA job id: 6897394436
[2025-11-26 18:36:49] 2025-11-26 23:36:14,928 | INFO     | task id: 47556161
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | errors: (none)
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | pilot state: finished 
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | transexitcode: 0
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | exeerrorcode: 0
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | exeerrordiag: 
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | exitcode: 0
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | exitmsg: OK
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | cpuconsumptiontime: 210792 s
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | nevents: 1000
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | neventsw: 0
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | pid: 3093238
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | pgrp: 3093238
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | corecount: 9
[2025-11-26 18:36:49] 2025-11-26 23:36:14,929 | INFO     | event service: False
[2025-11-26 18:36:49] 2025-11-26 23:36:14,930 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284583, 23: 2284583, 71579: 2343067, 71595: 2352061, 71598: 2352245, 71607: 2352491}
[2025-11-26 18:36:49] 2025-11-26 23:36:14,930 | INFO     | --------------------------------------------------
[2025-11-26 18:36:49] 2025-11-26 23:36:14,930 | INFO     | 
[2025-11-26 18:36:49] 2025-11-26 23:36:14,930 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 18:36:49] 2025-11-26 23:36:15,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | job 6897394436 has completed (purged errors)
[2025-11-26 18:36:49] 2025-11-26 23:36:15,072 | INFO     | overall cleanup function is called
[2025-11-26 18:36:49] 2025-11-26 23:36:16,587 | INFO     | --- collectZombieJob: --- 10, [3093238]
[2025-11-26 18:36:49] 2025-11-26 23:36:16,588 | INFO     | zombie collector waiting for pid 3093238
[2025-11-26 18:36:49] 2025-11-26 23:36:16,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:36:49] 2025-11-26 23:36:16,588 | INFO     | collected zombie processes
[2025-11-26 18:36:49] 2025-11-26 23:36:16,588 | INFO     | will attempt to kill all subprocesses of pid=3093238
[2025-11-26 18:36:49] 2025-11-26 23:36:18,173 | INFO     | process IDs to be killed: [3093238] (in reverse order)
[2025-11-26 18:36:49] 2025-11-26 23:36:18,440 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:36:49] 2025-11-26 23:36:18,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:36:49] 2025-11-26 23:36:18,737 | INFO     | did not find any defunct processes belonging to 3093238
[2025-11-26 18:36:49] 2025-11-26 23:36:18,955 | INFO     | did not find any defunct processes belonging to 3093238
[2025-11-26 18:36:49] 2025-11-26 23:36:19,014 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:36:49] 2025-11-26 23:36:19,015 | INFO     | ready for new job
[2025-11-26 18:36:49] 2025-11-26 23:36:19,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:36:49] 2025-11-26 23:36:19,079 | INFO     | ***************************************
[2025-11-26 18:36:49] 2025-11-26 23:36:19,083 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:36:49] 2025-11-26 23:36:19,083 | INFO     | ***************************************
[2025-11-26 18:36:49] 2025-11-26 23:36:19,083 | INFO     | 
[2025-11-26 18:36:49] 2025-11-26 23:36:19,088 | INFO     | architecture information:
[2025-11-26 18:36:49] 2025-11-26 23:36:19,096 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:36:49] 2025-11-26 23:36:19,166 | INFO     | cat /etc/os-release:
[2025-11-26 18:36:49] NAME="CentOS Linux"
[2025-11-26 18:36:49] VERSION="7 (Core)"
[2025-11-26 18:36:49] ID="centos"
[2025-11-26 18:36:49] ID_LIKE="rhel fedora"
[2025-11-26 18:36:49] VERSION_ID="7"
[2025-11-26 18:36:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:36:49] ANSI_COLOR="0;31"
[2025-11-26 18:36:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:36:49] HOME_URL="https://www.centos.org/"
[2025-11-26 18:36:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:36:49] 
[2025-11-26 18:36:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:36:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:36:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:36:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:36:49] 
[2025-11-26 18:36:49] 2025-11-26 23:36:19,166 | INFO     | ***************************************
[2025-11-26 18:36:49] 2025-11-26 23:36:19,670 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 18:36:49] 2025-11-26 23:36:19,699 | INFO     | sufficient remaining disk space (121394692096 B)
[2025-11-26 18:36:49] 2025-11-26 23:36:19,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:36:49] 2025-11-26 23:36:19,700 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:36:49] 2025-11-26 23:36:19,700 | INFO     | update_server=False
[2025-11-26 18:36:49] 2025-11-26 23:36:19,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:36:49] 2025-11-26 23:36:19,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:36:49] 2025-11-26 23:36:19,782 | INFO     | all payload control threads have been joined
[2025-11-26 18:36:49] 2025-11-26 23:36:19,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:36:49] 2025-11-26 23:36:20,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:36:49] 2025-11-26 23:36:20,440 | INFO     | aborting loop
[2025-11-26 18:36:49] 2025-11-26 23:36:20,592 | INFO     | all data control threads have been joined
[2025-11-26 18:36:49] 2025-11-26 23:36:20,674 | INFO     | all job control threads have been joined
[2025-11-26 18:36:49] 2025-11-26 23:36:20,707 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:20,793 | INFO     | [payload] control thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:20,921 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:20,946 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:36:49] 2025-11-26 23:36:21,134 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,140 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,446 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,623 | INFO     | [data] control thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,688 | INFO     | [job] control thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,744 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,945 | INFO     | [job] validate thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:21,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:22,111 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:22,112 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:22,125 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:23,087 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:36:49] 2025-11-26 23:36:25,129 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:36:49] 2025-11-26 23:36:25,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629857134400)>', '<ExcThread(monitor, started 140629199791872)>']
[2025-11-26 18:36:49] 2025-11-26 23:36:30,581 | INFO     | all workflow threads have been joined
[2025-11-26 18:36:49] 2025-11-26 23:36:30,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:36:49] 2025-11-26 23:36:30,581 | INFO     | traces error code: 0
[2025-11-26 18:36:49] 2025-11-26 23:36:30,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:36:49] 2025-11-26 23:36:47,635 | INFO     | PID=3086440 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:36:49] 2025-11-26 23:36:47,635 | INFO     | .. there are 26 such processes running
[2025-11-26 18:36:49] 2025-11-26 23:36:47,636 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:36:49] 2025-11-26 23:36:47,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:36:49] 2025-11-26 23:36:47,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:36:49] 2025-11-26 23:36:47,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:36:49] 2025-11-26 23:36:47,637 | INFO     | [monitor] control thread has ended
[2025-11-26 18:36:49] 2025-11-26 23:36:48,784 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:36:49] 2025-11-26 23:36:48,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:36:49] 2025-11-26 23:36:48,793 [wrapper] pilotpid: 3086440
[2025-11-26 18:36:49] 2025-11-26 23:36:48,815 [wrapper] Pilot exit status: 0
[2025-11-26 18:36:49] 2025-11-26 23:36:48,839 [wrapper] pandaids: 6897394436
[2025-11-26 18:36:49] 2025-11-26 23:36:48,946 [wrapper] cleanup supervisor_pilot 2793572 3086441
[2025-11-26 18:36:49] 2025-11-26 23:36:48,959 [wrapper] Test setup, not cleaning
[2025-11-26 18:36:49] 2025-11-26 23:36:48,965 [wrapper] apfmon messages muted
[2025-11-26 18:36:49] 2025-11-26 23:36:48,969 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:36:49] 2025-11-26 23:36:48,975 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:36:49]  *** Error codes and diagnostics ***
[2025-11-26 18:36:49]     "exeErrorCode": 0,
[2025-11-26 18:36:49]     "exeErrorDiag": "",
[2025-11-26 18:36:49]     "pilotErrorCode": 0,
[2025-11-26 18:36:49]     "pilotErrorDiag": "",
[2025-11-26 18:36:49]  *** Listing of results directory ***
[2025-11-26 18:36:49] total 1320016
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 18:36:49] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:36:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:41 run_atlas
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:41 job.xml
[2025-11-26 18:36:49] -rw-r--r--. 2 boincer umatlas 410453356 Nov 25 22:41 EVNT.47483658._002216.pool.root.1
[2025-11-26 18:36:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:41 start_atlas.sh
[2025-11-26 18:36:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:41 shared
[2025-11-26 18:36:49] -rw-r--r--. 2 boincer umatlas    590115 Nov 25 22:41 input.tar.gz
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:41 boinc_lockfile
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:41 pandaJob.out
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas        57 Nov 25 22:41 setup.sh.local
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas    991877 Nov 25 22:42 agis_schedconf.cvmfs.json
[2025-11-26 18:36:49] drwx------. 5 boincer umatlas      4096 Nov 25 22:42 pilot3
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:07 boinc_task_state.xml
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 18:27 init_data.xml
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas 914973010 Nov 26 18:34 HITS.47556161._001994.pool.root.1
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas      1062 Nov 26 18:35 memory_monitor_summary.json
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:35 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas   2353045 Nov 26 18:36 log.47556161._001994.job.log.tgz.1
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas      8605 Nov 26 18:36 heartbeat.json
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:36 wrapper_checkpoint.txt
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:36 boinc_mmap_file
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas        95 Nov 26 18:36 pilot_heartbeat.json
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas       823 Nov 26 18:36 pilotlog.txt
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas   8822599 Nov 26 18:36 log.47556161._001994.job.log.1
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas       353 Nov 26 18:36 output.list
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:36 runtime_log
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas  11192320 Nov 26 18:36 result.tar.gz
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 18:36 runtime_log.err
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas       664 Nov 26 18:36 bYFODm6WBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAaJKDmv4f07n.diag
[2025-11-26 18:36:49] -rw-r--r--. 1 boincer umatlas     21766 Nov 26 18:36 stderr.txt
[2025-11-26 18:36:49] HITS file was successfully produced:
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas 914973010 Nov 26 18:34 shared/HITS.pool.root.1
[2025-11-26 18:36:49]  *** Contents of shared directory: ***
[2025-11-26 18:36:49] total 1305904
[2025-11-26 18:36:49] -rw-r--r--. 2 boincer umatlas 410453356 Nov 25 22:41 ATLAS.root_0
[2025-11-26 18:36:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:41 start_atlas.sh
[2025-11-26 18:36:49] -rw-r--r--. 2 boincer umatlas    590115 Nov 25 22:41 input.tar.gz
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas 914973010 Nov 26 18:34 HITS.pool.root.1
[2025-11-26 18:36:49] -rw-------. 1 boincer umatlas  11192320 Nov 26 18:36 result.tar.gz
18:36:51 (3082450): run_atlas exited; CPU time 211417.271548
18:36:51 (3082450): called boinc_finish(0)

</stderr_txt>
]]>

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