Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:10:36 (1813954): wrapper (7.7.26015): starting
22:10:36 (1813954): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 22:10:36] Arguments: --nthreads 10
[2025-11-25 22:10:36] Threads: 10
[2025-11-25 22:10:36] Checking for CVMFS
[2025-11-25 22:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:10:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:10:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:10:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:10:36] 2.13.3.0 9371 29358 142512 153306 0 424 23811272 32935936 25621 16776704 0 157450405 99.772 90833925 34354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:10:36] CVMFS is ok
[2025-11-25 22:10:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:10:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:10:36] Further information can be found at the LHC@home message board.
[2025-11-25 22:10:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:10:36] Checking for apptainer binary...
[2025-11-25 22:10:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:10:36] Running /usr/bin/apptainer --version
[2025-11-25 22:10:36] apptainer version 1.4.4-1.el9
[2025-11-25 22:10:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:10:37] c-8-1.aglt2.org
[2025-11-25 22:10:37] apptainer works
[2025-11-25 22:10:37] Set ATHENA_PROC_NUMBER=10
[2025-11-25 22:10:37] Set ATHENA_CORE_NUMBER=10
[2025-11-25 22:10:37] Starting ATLAS job with PandaID=6897394537
[2025-11-25 22:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:14:12]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:14:12] 2025-11-27 00:13:08,517 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:14:12] 2025-11-27 00:13:08,519 | INFO     | sum of square deviations: 592642698066.9028
[2025-11-26 19:14:12] 2025-11-27 00:13:08,559 | INFO     | sum of deviations: 4494052325923.725
[2025-11-26 19:14:12] 2025-11-27 00:13:08,559 | INFO     | mean x: 1764164513.0499597
[2025-11-26 19:14:12] 2025-11-27 00:13:08,559 | INFO     | mean y: 3248831.294923449
[2025-11-26 19:14:12] 2025-11-27 00:13:08,559 | INFO     | intersect: -13374537917.862415
[2025-11-26 19:14:12] 2025-11-27 00:13:08,561 | INFO     | chi2: 10.050825530302546
[2025-11-26 19:14:12] 2025-11-27 00:13:08,563 | INFO     | sum of square deviations: 585508617521.3678
[2025-11-26 19:14:12] 2025-11-27 00:13:08,602 | INFO     | sum of deviations: 4990533515938.005
[2025-11-26 19:14:12] 2025-11-27 00:13:08,603 | INFO     | mean x: 1764164360.554207
[2025-11-26 19:14:12] 2025-11-27 00:13:08,603 | INFO     | mean y: 3259443.872977346
[2025-11-26 19:14:12] 2025-11-27 00:13:08,603 | INFO     | intersect: -15033447285.123726
[2025-11-26 19:14:12] 2025-11-27 00:13:08,605 | INFO     | chi2: 6.470917730814101
[2025-11-26 19:14:12] 2025-11-27 00:13:08,605 | INFO     | current chi2=6.470917730814101 (change=35.61804738024026 %)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,607 | INFO     | sum of square deviations: 578432026425.7888
[2025-11-26 19:14:12] 2025-11-27 00:13:08,646 | INFO     | sum of deviations: 5363353430339.356
[2025-11-26 19:14:12] 2025-11-27 00:13:08,647 | INFO     | mean x: 1764164208.058489
[2025-11-26 19:14:12] 2025-11-27 00:13:08,647 | INFO     | mean y: 3267473.592201462
[2025-11-26 19:14:12] 2025-11-27 00:13:08,647 | INFO     | intersect: -16354464679.377268
[2025-11-26 19:14:12] 2025-11-27 00:13:08,649 | INFO     | chi2: 4.210535642813715
[2025-11-26 19:14:12] 2025-11-27 00:13:08,649 | INFO     | current chi2=4.210535642813715 (change=34.931398945725874 %)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,650 | INFO     | sum of square deviations: 571412617249.7887
[2025-11-26 19:14:12] 2025-11-27 00:13:08,689 | INFO     | sum of deviations: 5580480546019.061
[2025-11-26 19:14:12] 2025-11-27 00:13:08,689 | INFO     | mean x: 1764164055.5619903
[2025-11-26 19:14:12] 2025-11-27 00:13:08,690 | INFO     | mean y: 3272187.3017944535
[2025-11-26 19:14:12] 2025-11-27 00:13:08,690 | INFO     | intersect: -17225754429.984394
[2025-11-26 19:14:12] 2025-11-27 00:13:08,691 | INFO     | chi2: 3.2732088974017626
[2025-11-26 19:14:12] 2025-11-27 00:13:08,692 | INFO     | current chi2=3.2732088974017626 (change=22.261460890652348 %)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,692 | INFO     | right removable region: 1225
[2025-11-26 19:14:12] 2025-11-27 00:13:08,693 | INFO     | sum of square deviations: 585507822691.3677
[2025-11-26 19:14:12] 2025-11-27 00:13:08,733 | INFO     | sum of deviations: 4050983890569.8013
[2025-11-26 19:14:12] 2025-11-27 00:13:08,733 | INFO     | mean x: 1764164665.554207
[2025-11-26 19:14:12] 2025-11-27 00:13:08,733 | INFO     | mean y: 3258295.682038835
[2025-11-26 19:14:12] 2025-11-27 00:13:08,733 | INFO     | intersect: -12202560932.52606
[2025-11-26 19:14:12] 2025-11-27 00:13:08,735 | INFO     | chi2: 7.454618456098202
[2025-11-26 19:14:12] 2025-11-27 00:13:08,735 | INFO     | current chi2=7.454618456098202 (change=25.830784410464187 %)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,737 | INFO     | sum of square deviations: 578430813751.354
[2025-11-26 19:14:12] 2025-11-27 00:13:08,776 | INFO     | sum of deviations: 3923899388204.189
[2025-11-26 19:14:12] 2025-11-27 00:13:08,776 | INFO     | mean x: 1764164818.0544274
[2025-11-26 19:14:12] 2025-11-27 00:13:08,776 | INFO     | mean y: 3261034.5792038995
[2025-11-26 19:14:12] 2025-11-27 00:13:08,776 | INFO     | intersect: -11964298586.528408
[2025-11-26 19:14:12] 2025-11-27 00:13:08,778 | INFO     | chi2: 7.372821861240226
[2025-11-26 19:14:12] 2025-11-27 00:13:08,778 | INFO     | current chi2=7.372821861240226 (change=1.0972606490820842 %)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,778 | INFO     | left removable region: 20
[2025-11-26 19:14:12] 2025-11-27 00:13:08,780 | INFO     | sum of square deviations: 542549274907.5551
[2025-11-26 19:14:12] 2025-11-27 00:13:08,817 | INFO     | sum of deviations: 4804812978040.968
[2025-11-26 19:14:12] 2025-11-27 00:13:08,818 | INFO     | mean x: 1764164635.06722
[2025-11-26 19:14:12] 2025-11-27 00:13:08,818 | INFO     | mean y: 3290186.444813278
[2025-11-26 19:14:12] 2025-11-27 00:13:08,818 | INFO     | intersect: -15620140764.441984
[2025-11-26 19:14:12] 2025-11-27 00:13:08,820 | INFO     | chi2: 0.4158063287225531
[2025-11-26 19:14:12] 2025-11-27 00:13:08,820 | INFO     | current memory leak: 8.86 B/s (using 1205 data points, chi2=0.42)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,821 | INFO     | could have reported an average CPU frequency of 2599 MHz (45 samples)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | ..............................
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . Timing measurements:
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . get job = 0 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . initial setup = 2 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . payload setup = 8 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . stage-in = 0 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . payload execution = 75684 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,822 | INFO     | . stage-out = 6 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,823 | INFO     | . log creation = 1 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,823 | INFO     | ..............................
[2025-11-26 19:14:12] 2025-11-27 00:13:08,964 | INFO     | 
[2025-11-26 19:14:12] 2025-11-27 00:13:08,964 | INFO     | job summary report
[2025-11-26 19:14:12] 2025-11-27 00:13:08,964 | INFO     | --------------------------------------------------
[2025-11-26 19:14:12] 2025-11-27 00:13:08,964 | INFO     | PanDA job id: 6897394537
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | task id: 47556161
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | errors: (none)
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | pilot state: finished 
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | transexitcode: 0
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | exeerrorcode: 0
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | exeerrordiag: 
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | exitcode: 0
[2025-11-26 19:14:12] 2025-11-27 00:13:08,965 | INFO     | exitmsg: OK
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | cpuconsumptiontime: 310645 s
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | nevents: 1000
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | neventsw: 0
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | pid: 1832956
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | pgrp: 1832956
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | corecount: 10
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | event service: False
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | sizes: {0: 2284094, 1: 2284293, 10: 2284555, 12: 2284583, 75696: 2347509, 75697: 2347508, 75704: 2356742, 75714: 2356932}
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | --------------------------------------------------
[2025-11-26 19:14:12] 2025-11-27 00:13:08,966 | INFO     | 
[2025-11-26 19:14:12] 2025-11-27 00:13:08,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 19:14:12] 2025-11-27 00:13:09,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | job 6897394537 has completed (purged errors)
[2025-11-26 19:14:12] 2025-11-27 00:13:09,029 | INFO     | overall cleanup function is called
[2025-11-26 19:14:12] 2025-11-27 00:13:10,156 | INFO     | --- collectZombieJob: --- 10, [1832956]
[2025-11-26 19:14:12] 2025-11-27 00:13:10,156 | INFO     | zombie collector waiting for pid 1832956
[2025-11-26 19:14:12] 2025-11-27 00:13:10,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:14:12] 2025-11-27 00:13:10,157 | INFO     | collected zombie processes
[2025-11-26 19:14:12] 2025-11-27 00:13:10,157 | INFO     | will attempt to kill all subprocesses of pid=1832956
[2025-11-26 19:14:12] 2025-11-27 00:13:10,943 | INFO     | process IDs to be killed: [1832956] (in reverse order)
[2025-11-26 19:14:12] 2025-11-27 00:13:11,159 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:14:12] 2025-11-27 00:13:11,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:14:12] 2025-11-27 00:13:11,189 | INFO     | did not find any defunct processes belonging to 1832956
[2025-11-26 19:14:12] 2025-11-27 00:13:11,207 | INFO     | did not find any defunct processes belonging to 1832956
[2025-11-26 19:14:12] 2025-11-27 00:13:11,209 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:14:12] 2025-11-27 00:13:11,209 | INFO     | ready for new job
[2025-11-26 19:14:12] 2025-11-27 00:13:11,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:14:12] 2025-11-27 00:13:11,216 | INFO     | ***************************************
[2025-11-26 19:14:12] 2025-11-27 00:13:11,216 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:14:12] 2025-11-27 00:13:11,225 | INFO     | ***************************************
[2025-11-26 19:14:12] 2025-11-27 00:13:11,225 | INFO     | 
[2025-11-26 19:14:12] 2025-11-27 00:13:11,227 | INFO     | architecture information:
[2025-11-26 19:14:12] 2025-11-27 00:13:11,228 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:14:12] 2025-11-27 00:13:11,311 | INFO     | cat /etc/os-release:
[2025-11-26 19:14:12] NAME="CentOS Linux"
[2025-11-26 19:14:12] VERSION="7 (Core)"
[2025-11-26 19:14:12] ID="centos"
[2025-11-26 19:14:12] ID_LIKE="rhel fedora"
[2025-11-26 19:14:12] VERSION_ID="7"
[2025-11-26 19:14:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:14:12] ANSI_COLOR="0;31"
[2025-11-26 19:14:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:14:12] HOME_URL="https://www.centos.org/"
[2025-11-26 19:14:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:14:12] 
[2025-11-26 19:14:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:14:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:14:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:14:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:14:12] 
[2025-11-26 19:14:12] 2025-11-27 00:13:11,312 | INFO     | ***************************************
[2025-11-26 19:14:12] 2025-11-27 00:13:11,819 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 19:14:12] 2025-11-27 00:13:11,930 | INFO     | sufficient remaining disk space (72428290048 B)
[2025-11-26 19:14:12] 2025-11-27 00:13:11,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:14:12] 2025-11-27 00:13:11,930 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:14:12] 2025-11-27 00:13:11,930 | INFO     | update_server=False
[2025-11-26 19:14:12] 2025-11-27 00:13:11,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:14:12] 2025-11-27 00:13:12,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:14:12] 2025-11-27 00:13:12,276 | INFO     | all payload control threads have been joined
[2025-11-26 19:14:12] 2025-11-27 00:13:12,385 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 19:14:12] 2025-11-27 00:13:12,385 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 19:14:12] 2025-11-27 00:13:12,386 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:14:12] 2025-11-27 00:13:12,386 | INFO     | will abort loop
[2025-11-26 19:14:12] 2025-11-27 00:13:12,796 | INFO     | all data control threads have been joined
[2025-11-26 19:14:12] 2025-11-27 00:13:12,936 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,135 | INFO     | all job control threads have been joined
[2025-11-26 19:14:12] 2025-11-27 00:13:13,282 | INFO     | [payload] control thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,300 | INFO     | [job] validate thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,390 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,396 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,444 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,500 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,525 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,645 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,802 | INFO     | [data] control thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:13,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:14:12] 2025-11-27 00:13:14,035 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:14,078 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:14,140 | INFO     | [job] control thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:14,203 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:14,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:14:12] 2025-11-27 00:13:14,996 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:18,319 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:14:12] 2025-11-27 00:13:41,539 | INFO     | PID=1818982 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:14:12] 2025-11-27 00:13:41,540 | INFO     | .. there are 41 such processes running
[2025-11-26 19:14:12] 2025-11-27 00:13:41,540 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:14:12] 2025-11-27 00:13:41,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:14:12] 2025-11-27 00:13:41,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:14:12] 2025-11-27 00:14:05,641 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:14:12] 2025-11-27 00:14:06,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971104319296)>', '<ExcThread(monitor, started 139970601793280)>']
[2025-11-26 19:14:12] 2025-11-27 00:14:06,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:14:12] 2025-11-27 00:14:06,715 | INFO     | [monitor] control thread has ended
[2025-11-26 19:14:12] 2025-11-27 00:14:11,170 | INFO     | all workflow threads have been joined
[2025-11-26 19:14:12] 2025-11-27 00:14:11,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:14:12] 2025-11-27 00:14:11,171 | INFO     | traces error code: 0
[2025-11-26 19:14:12] 2025-11-27 00:14:11,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:14:12] 2025-11-27 00:14:11,418 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:14:12] 2025-11-27 00:14:11,422 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:14:12] 2025-11-27 00:14:11,427 [wrapper] pilotpid: 1818982
[2025-11-26 19:14:12] 2025-11-27 00:14:11,441 [wrapper] Pilot exit status: 0
[2025-11-26 19:14:12] 2025-11-27 00:14:11,520 [wrapper] pandaids: 6897394537
[2025-11-26 19:14:12] 2025-11-27 00:14:11,694 [wrapper] cleanup supervisor_pilot 2623823 1818983
[2025-11-26 19:14:12] 2025-11-27 00:14:11,708 [wrapper] Test setup, not cleaning
[2025-11-26 19:14:12] 2025-11-27 00:14:11,734 [wrapper] apfmon messages muted
[2025-11-26 19:14:12] 2025-11-27 00:14:11,757 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:14:12] 2025-11-27 00:14:11,780 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:14:12]  *** Error codes and diagnostics ***
[2025-11-26 19:14:12]     "exeErrorCode": 0,
[2025-11-26 19:14:12]     "exeErrorDiag": "",
[2025-11-26 19:14:12]     "pilotErrorCode": 0,
[2025-11-26 19:14:12]     "pilotErrorDiag": "",
[2025-11-26 19:14:12]  *** Listing of results directory ***
[2025-11-26 19:14:12] total 1329208
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 19:14:12] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:14:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:10 run_atlas
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:10 job.xml
[2025-11-26 19:14:12] -rw-r--r--. 2 boincer umatlas 411836724 Nov 25 22:10 EVNT.47483658._002224.pool.root.1
[2025-11-26 19:14:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:10 start_atlas.sh
[2025-11-26 19:14:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:10 shared
[2025-11-26 19:14:12] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 22:10 input.tar.gz
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:10 boinc_lockfile
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:10 pandaJob.out
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas        57 Nov 25 22:10 setup.sh.local
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas    991877 Nov 25 22:10 agis_schedconf.cvmfs.json
[2025-11-26 19:14:12] drwx------. 5 boincer umatlas      4096 Nov 25 22:10 pilot3
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:52 boinc_task_state.xml
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas      6660 Nov 26 19:11 init_data.xml
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas 919543356 Nov 26 19:12 HITS.47556161._002075.pool.root.1
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas      1077 Nov 26 19:12 memory_monitor_summary.json
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas   1516240 Nov 26 19:12 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas   2610936 Nov 26 19:12 log.47556161._002075.job.log.tgz.1
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas        95 Nov 26 19:13 pilot_heartbeat.json
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas      8676 Nov 26 19:13 heartbeat.json
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:14 wrapper_checkpoint.txt
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:14 boinc_mmap_file
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas      5010 Nov 26 19:14 pilotlog.txt
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas  10295096 Nov 26 19:14 log.47556161._002075.job.log.1
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas       353 Nov 26 19:14 output.list
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas       620 Nov 26 19:14 runtime_log
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas  12922880 Nov 26 19:14 result.tar.gz
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas      9330 Nov 26 19:14 runtime_log.err
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas       662 Nov 26 19:14 LICMDmDXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEVMKDmTtDpIn.diag
[2025-11-26 19:14:12] -rw-r--r--. 1 boincer umatlas     21152 Nov 26 19:14 stderr.txt
[2025-11-26 19:14:12] HITS file was successfully produced:
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas 919543356 Nov 26 19:12 shared/HITS.pool.root.1
[2025-11-26 19:14:12]  *** Contents of shared directory: ***
[2025-11-26 19:14:12] total 1313400
[2025-11-26 19:14:12] -rw-r--r--. 2 boincer umatlas 411836724 Nov 25 22:10 ATLAS.root_0
[2025-11-26 19:14:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:10 start_atlas.sh
[2025-11-26 19:14:12] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 22:10 input.tar.gz
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas 919543356 Nov 26 19:12 HITS.pool.root.1
[2025-11-26 19:14:12] -rw-------. 1 boincer umatlas  12922880 Nov 26 19:14 result.tar.gz
19:14:13 (1813954): run_atlas exited; CPU time 312469.990540
19:14:13 (1813954): called boinc_finish(0)

</stderr_txt>
]]>

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