Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:29:48 (2214964): wrapper (7.7.26015): starting
11:29:48 (2214964): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 11:29:48] Arguments: --nthreads 12
[2025-11-27 11:29:48] Threads: 12
[2025-11-27 11:29:48] Checking for CVMFS
[2025-11-27 11:29:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:29:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:29:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:29:49] 2.13.3.0 10248 28529 91400 153360 0 90 39316088 46080000 1695 130560 1 14289658 99.936 1482254 2060 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-27 11:29:49] CVMFS is ok
[2025-11-27 11:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:29:49] Further information can be found at the LHC@home message board.
[2025-11-27 11:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:29:49] Checking for apptainer binary...
[2025-11-27 11:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:29:49] Running /usr/bin/apptainer --version
[2025-11-27 11:29:49] apptainer version 1.4.3-1.el9
[2025-11-27 11:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:29:49] gpu01.farm.particle.cz
[2025-11-27 11:29:49] apptainer works
[2025-11-27 11:29:49] Set ATHENA_PROC_NUMBER=12
[2025-11-27 11:29:49] Set ATHENA_CORE_NUMBER=12
[2025-11-27 11:29:49] Starting ATLAS job with PandaID=6897372682
[2025-11-27 11:29:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:35:26]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:35:26] 2025-11-27 14:34:54,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,044 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:35:26] 2025-11-27 14:34:55,048 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3212.70265625
[2025-11-27 15:35:26] 2025-11-27 14:34:55,051 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6897372682/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,052 | INFO     | extracted standard info from prmon json
[2025-11-27 15:35:26] 2025-11-27 14:34:55,052 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:35:26] 2025-11-27 14:34:55,052 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:35:26] 2025-11-27 14:34:55,054 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:35:26] 2025-11-27 14:34:55,055 | INFO     | sum of square deviations: 4340125863.991701
[2025-11-27 15:35:26] 2025-11-27 14:34:55,055 | INFO     | sum of deviations: 62014583799.44398
[2025-11-27 15:35:26] 2025-11-27 14:34:55,055 | INFO     | mean x: 1764246738.9087136
[2025-11-27 15:35:26] 2025-11-27 14:34:55,055 | INFO     | mean y: 3443253.8838174273
[2025-11-27 15:35:26] 2025-11-27 14:34:55,056 | INFO     | intersect: -25205278949.468254
[2025-11-27 15:35:26] 2025-11-27 14:34:55,056 | INFO     | chi2: 5.7481890409954
[2025-11-27 15:35:26] 2025-11-27 14:34:55,056 | INFO     | sum of square deviations: 4075610949.775437
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | sum of deviations: 165079901459.445
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | mean x: 1764246586.427966
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | mean y: 3502709.11440678
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | intersect: -71456127816.6447
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | chi2: 2.099410581764805
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | current chi2=2.099410581764805 (change=63.47700872758257 %)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,057 | INFO     | sum of square deviations: 3822044561.151513
[2025-11-27 15:35:26] 2025-11-27 14:34:55,058 | INFO     | sum of deviations: 186507089775.30307
[2025-11-27 15:35:26] 2025-11-27 14:34:55,058 | INFO     | mean x: 1764246433.939394
[2025-11-27 15:35:26] 2025-11-27 14:34:55,058 | INFO     | mean y: 3515405.3073593075
[2025-11-27 15:35:26] 2025-11-27 14:34:55,058 | INFO     | intersect: -86087701684.36407
[2025-11-27 15:35:26] 2025-11-27 14:34:55,058 | INFO     | chi2: 1.6300076473135343
[2025-11-27 15:35:26] 2025-11-27 14:34:55,058 | INFO     | current chi2=1.6300076473135343 (change=22.358796251121184 %)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,059 | INFO     | right removable region: 230
[2025-11-27 15:35:26] 2025-11-27 14:34:55,059 | INFO     | sum of square deviations: 4075521099.3050976
[2025-11-27 15:35:26] 2025-11-27 14:34:55,059 | INFO     | sum of deviations: 3553387905.211941
[2025-11-27 15:35:26] 2025-11-27 14:34:55,060 | INFO     | mean x: 1764246891.4152544
[2025-11-27 15:35:26] 2025-11-27 14:34:55,060 | INFO     | mean y: 3476680.38559322
[2025-11-27 15:35:26] 2025-11-27 14:34:55,060 | INFO     | intersect: -1534744669.230691
[2025-11-27 15:35:26] 2025-11-27 14:34:55,060 | INFO     | chi2: 4.213956409793186
[2025-11-27 15:35:26] 2025-11-27 14:34:55,060 | INFO     | current chi2=4.213956409793186 (change=26.690712853391734 %)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,060 | INFO     | sum of square deviations: 3821922444.268388
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | sum of deviations: -8485465136.013039
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | mean x: 1764247043.91342
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | mean y: 3483908.649350649
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | intersect: 3920480394.2510133
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | chi2: 4.194331599033252
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | current chi2=4.194331599033252 (change=0.46570986625123706 %)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | left removable region: 20
[2025-11-27 15:35:26] 2025-11-27 14:34:55,061 | INFO     | sum of square deviations: 2871523251.9237995
[2025-11-27 15:35:26] 2025-11-27 14:34:55,062 | INFO     | sum of deviations: 93268482287.02856
[2025-11-27 15:35:26] 2025-11-27 14:34:55,062 | INFO     | mean x: 1764247013.447619
[2025-11-27 15:35:26] 2025-11-27 14:34:55,062 | INFO     | mean y: 3573798.9571428574
[2025-11-27 15:35:26] 2025-11-27 14:34:55,062 | INFO     | intersect: -57300033690.00944
[2025-11-27 15:35:26] 2025-11-27 14:34:55,062 | INFO     | chi2: 0.009240932973642795
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | current memory leak: 32.48 B/s (using 210 data points, chi2=0.01)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | could have reported an average CPU frequency of 3201 MHz (12 samples)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | ..............................
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . Timing measurements:
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . get job = 0 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . initial setup = 2 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . payload setup = 3 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . stage-in = 0 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . payload execution = 14667 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . stage-out = 2 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | . log creation = 0 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,063 | INFO     | ..............................
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | 
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | job summary report
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | --------------------------------------------------
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | PanDA job id: 6897372682
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | task id: 47556161
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | errors: (none)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | pilot state: finished 
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | transexitcode: 0
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | exeerrorcode: 0
[2025-11-27 15:35:26] 2025-11-27 14:34:55,115 | INFO     | exeerrordiag: 
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | exitcode: 0
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | exitmsg: OK
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | cpuconsumptiontime: 169507 s
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | nevents: 1000
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | neventsw: 0
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | pid: 2226407
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | pgrp: 2226407
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | corecount: 12
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | event service: False
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | sizes: {0: 2283437, 1: 2284293, 4: 2284555, 11: 2284583, 14675: 2316537, 14678: 2325531, 14679: 2325715, 14685: 2325961}
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | --------------------------------------------------
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | 
[2025-11-27 15:35:26] 2025-11-27 14:34:55,116 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-27 15:35:26] 2025-11-27 14:34:55,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:35:26] 2025-11-27 14:34:55,133 | INFO     | job 6897372682 has completed (purged errors)
[2025-11-27 15:35:26] 2025-11-27 14:34:55,133 | INFO     | overall cleanup function is called
[2025-11-27 15:35:26] 2025-11-27 14:34:56,151 | INFO     | --- collectZombieJob: --- 10, [2226407]
[2025-11-27 15:35:26] 2025-11-27 14:34:56,152 | INFO     | zombie collector waiting for pid 2226407
[2025-11-27 15:35:26] 2025-11-27 14:34:56,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:35:26] 2025-11-27 14:34:56,152 | INFO     | collected zombie processes
[2025-11-27 15:35:26] 2025-11-27 14:34:56,152 | INFO     | will attempt to kill all subprocesses of pid=2226407
[2025-11-27 15:35:26] 2025-11-27 14:34:56,243 | INFO     | process IDs to be killed: [2226407] (in reverse order)
[2025-11-27 15:35:26] 2025-11-27 14:34:56,283 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:35:26] 2025-11-27 14:34:56,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:35:26] 2025-11-27 14:34:56,287 | INFO     | did not find any defunct processes belonging to 2226407
[2025-11-27 15:35:26] 2025-11-27 14:34:56,290 | INFO     | did not find any defunct processes belonging to 2226407
[2025-11-27 15:35:26] 2025-11-27 14:34:56,291 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:35:26] 2025-11-27 14:34:56,291 | INFO     | ready for new job
[2025-11-27 15:35:26] 2025-11-27 14:34:56,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:35:26] 2025-11-27 14:34:56,292 | INFO     | ***************************************
[2025-11-27 15:35:26] 2025-11-27 14:34:56,292 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:35:26] 2025-11-27 14:34:56,292 | INFO     | ***************************************
[2025-11-27 15:35:26] 2025-11-27 14:34:56,292 | INFO     | 
[2025-11-27 15:35:26] 2025-11-27 14:34:56,294 | INFO     | architecture information:
[2025-11-27 15:35:26] 2025-11-27 14:34:56,294 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:35:26] 2025-11-27 14:34:56,305 | INFO     | cat /etc/os-release:
[2025-11-27 15:35:26] NAME="CentOS Linux"
[2025-11-27 15:35:26] VERSION="7 (Core)"
[2025-11-27 15:35:26] ID="centos"
[2025-11-27 15:35:26] ID_LIKE="rhel fedora"
[2025-11-27 15:35:26] VERSION_ID="7"
[2025-11-27 15:35:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:35:26] ANSI_COLOR="0;31"
[2025-11-27 15:35:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:35:26] HOME_URL="https://www.centos.org/"
[2025-11-27 15:35:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:35:26] 
[2025-11-27 15:35:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:35:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:35:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:35:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:35:26] 
[2025-11-27 15:35:26] 2025-11-27 14:34:56,305 | INFO     | ***************************************
[2025-11-27 15:35:26] 2025-11-27 14:34:56,808 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-27 15:35:26] 2025-11-27 14:34:56,820 | INFO     | sufficient remaining disk space (14280556544 B)
[2025-11-27 15:35:26] 2025-11-27 14:34:56,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | INFO     | update_server=False
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:35:26] 2025-11-27 14:34:56,821 | INFO     | aborting loop
[2025-11-27 15:35:26] 2025-11-27 14:34:57,363 | INFO     | all payload control threads have been joined
[2025-11-27 15:35:26] 2025-11-27 14:34:57,808 | INFO     | all data control threads have been joined
[2025-11-27 15:35:26] 2025-11-27 14:34:57,826 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:57,827 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:57,827 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:57,842 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:57,945 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:58,176 | INFO     | all job control threads have been joined
[2025-11-27 15:35:26] 2025-11-27 14:34:58,369 | INFO     | [payload] control thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:58,557 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:58,741 | INFO     | [job] validate thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:58,813 | INFO     | [data] control thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:58,827 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:58,851 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:59,151 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:59,182 | INFO     | [job] control thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:34:59,216 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:35:00,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:35:26] 2025-11-27 14:35:04,188 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:35:07,763 | INFO     | job.realtimelogging is not enabled
[2025-11-27 15:35:26] 2025-11-27 14:35:08,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:35:26] 2025-11-27 14:35:17,726 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:35:26] 2025-11-27 14:35:18,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736221067072)>', '<ExcThread(monitor, started 139735729161984)>']
[2025-11-27 15:35:26] 2025-11-27 14:35:23,067 | INFO     | all workflow threads have been joined
[2025-11-27 15:35:26] 2025-11-27 14:35:23,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:35:26] 2025-11-27 14:35:23,068 | INFO     | traces error code: 0
[2025-11-27 15:35:26] 2025-11-27 14:35:23,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:35:26] 2025-11-27 14:35:26,740 | INFO     | PID=2218840 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | INFO     | .. there are 2 such processes running
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 15:35:26] 2025-11-27 14:35:26,741 | INFO     | [monitor] control thread has ended
[2025-11-27 15:35:26] 2025-11-27 14:35:26,804 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:35:26] 2025-11-27 14:35:26,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:35:26] 2025-11-27 14:35:26,809 [wrapper] pilotpid: 2218840
[2025-11-27 15:35:26] 2025-11-27 14:35:26,810 [wrapper] Pilot exit status: 0
[2025-11-27 15:35:26] 2025-11-27 14:35:26,817 [wrapper] pandaids: 6897372682
[2025-11-27 15:35:26] 2025-11-27 14:35:26,843 [wrapper] cleanup supervisor_pilot 2413684 2218841
[2025-11-27 15:35:26] 2025-11-27 14:35:26,845 [wrapper] Test setup, not cleaning
[2025-11-27 15:35:26] 2025-11-27 14:35:26,847 [wrapper] apfmon messages muted
[2025-11-27 15:35:26] 2025-11-27 14:35:26,849 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:35:26] 2025-11-27 14:35:26,851 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:35:26]  *** Error codes and diagnostics ***
[2025-11-27 15:35:26]     "exeErrorCode": 0,
[2025-11-27 15:35:26]     "exeErrorDiag": "",
[2025-11-27 15:35:26]     "pilotErrorCode": 0,
[2025-11-27 15:35:26]     "pilotErrorDiag": "",
[2025-11-27 15:35:26]  *** Listing of results directory ***
[2025-11-27 15:35:26] total 1315412
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-27 15:35:26] -rwx------ 1 boinc boinc     36292 Nov 25 17:57 runpilot2-wrapper.sh
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc       100 Nov 27 11:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:35:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 11:29 run_atlas
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc       105 Nov 27 11:29 job.xml
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc      9445 Nov 27 11:29 init_data.xml
[2025-11-27 15:35:26] -rw-r--r-- 2 boinc boinc 409994071 Nov 27 11:29 EVNT.47483658._002202.pool.root.1
[2025-11-27 15:35:26] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:29 start_atlas.sh
[2025-11-27 15:35:26] drwxrwx--x 2 boinc boinc      4096 Nov 27 11:29 shared
[2025-11-27 15:35:26] -rw-r--r-- 2 boinc boinc    590106 Nov 27 11:29 input.tar.gz
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc         0 Nov 27 11:29 boinc_lockfile
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc      2786 Nov 27 11:29 pandaJob.out
[2025-11-27 15:35:26] -rw------- 1 boinc boinc    991564 Nov 27 11:29 agis_schedconf.cvmfs.json
[2025-11-27 15:35:26] drwx------ 5 boinc boinc      4096 Nov 27 11:29 pilot3
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc       532 Nov 27 15:26 boinc_task_state.xml
[2025-11-27 15:35:26] -rw------- 1 boinc boinc 924835307 Nov 27 15:34 HITS.47556161._001859.pool.root.1
[2025-11-27 15:35:26] -rw------- 1 boinc boinc        95 Nov 27 15:34 pilot_heartbeat.json
[2025-11-27 15:35:26] -rw------- 1 boinc boinc      1032 Nov 27 15:34 memory_monitor_summary.json
[2025-11-27 15:35:26] -rw------- 1 boinc boinc   1516240 Nov 27 15:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:35:26] -rw------- 1 boinc boinc   1985567 Nov 27 15:34 log.47556161._001859.job.log.tgz.1
[2025-11-27 15:35:26] -rw------- 1 boinc boinc      8592 Nov 27 15:34 heartbeat.json
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc        29 Nov 27 15:35 wrapper_checkpoint.txt
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc      8192 Nov 27 15:35 boinc_mmap_file
[2025-11-27 15:35:26] -rw------- 1 boinc boinc       892 Nov 27 15:35 pilotlog.txt
[2025-11-27 15:35:26] -rw------- 1 boinc boinc   2130343 Nov 27 15:35 log.47556161._001859.job.log.1
[2025-11-27 15:35:26] -rw------- 1 boinc boinc       353 Nov 27 15:35 output.list
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc       620 Nov 27 15:35 runtime_log
[2025-11-27 15:35:26] -rw------- 1 boinc boinc   4136960 Nov 27 15:35 result.tar.gz
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc      8855 Nov 27 15:35 runtime_log.err
[2025-11-27 15:35:26] -rw------- 1 boinc boinc       667 Nov 27 15:35 Rr9MDm6WBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNZJKDmPSHzTm.diag
[2025-11-27 15:35:26] -rw-r--r-- 1 boinc boinc     21280 Nov 27 15:35 stderr.txt
[2025-11-27 15:35:26] HITS file was successfully produced:
[2025-11-27 15:35:26] -rw------- 1 boinc boinc 924835307 Nov 27 15:34 shared/HITS.pool.root.1
[2025-11-27 15:35:26]  *** Contents of shared directory: ***
[2025-11-27 15:35:26] total 1308192
[2025-11-27 15:35:26] -rw-r--r-- 2 boinc boinc 409994071 Nov 27 11:29 ATLAS.root_0
[2025-11-27 15:35:26] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:29 start_atlas.sh
[2025-11-27 15:35:26] -rw-r--r-- 2 boinc boinc    590106 Nov 27 11:29 input.tar.gz
[2025-11-27 15:35:26] -rw------- 1 boinc boinc 924835307 Nov 27 15:34 HITS.pool.root.1
[2025-11-27 15:35:26] -rw------- 1 boinc boinc   4136960 Nov 27 15:35 result.tar.gz
15:35:28 (2214964): run_atlas exited; CPU time 169327.005705
15:35:28 (2214964): called boinc_finish(0)

</stderr_txt>
]]>

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