Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:25 (3399680): wrapper (7.7.26015): starting
00:00:25 (3399680): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:25] Arguments: --nthreads 9
[2025-11-26 00:00:25] Threads: 9
[2025-11-26 00:00:25] Checking for CVMFS
[2025-11-26 00:00:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:27] 2.13.3.0 11900 29602 384768 153309 3 354 24690652 32935936 39013 16776704 0 158065884 99.507 197055415 33940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 00:00:27] CVMFS is ok
[2025-11-26 00:00:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:27] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:27] Checking for apptainer binary...
[2025-11-26 00:00:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:27] Running /usr/bin/apptainer --version
[2025-11-26 00:00:27] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:28] c6-12-27-1.aglt2.org
[2025-11-26 00:00:28] apptainer works
[2025-11-26 00:00:28] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:28] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:28] Starting ATLAS job with PandaID=6897139519
[2025-11-26 00:00:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:40:06 (3399680): BOINC client no longer exists - exiting
05:40:06 (3399680): timer handler: client dead, exiting
05:48:33 (731256): wrapper (7.7.26015): starting
05:48:33 (731256): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 05:48:33] Arguments: --nthreads 9
[2025-11-26 05:48:33] Threads: 9
[2025-11-26 05:48:33] This job has been restarted, cleaning up previous attempt
[2025-11-26 05:48:33] Checking for CVMFS
[2025-11-26 05:48:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 05:48:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 05:48:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 05:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 05:48:33] 2.13.3.0 11900 29951 384292 153318 0 294 28963208 32935937 33552 16776704 0 160350867 99.510 198371356 33911 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 05:48:33] CVMFS is ok
[2025-11-26 05:48:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:48:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:48:33] Further information can be found at the LHC@home message board.
[2025-11-26 05:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:48:33] Checking for apptainer binary...
[2025-11-26 05:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 05:48:33] Running /usr/bin/apptainer --version
[2025-11-26 05:48:33] apptainer version 1.4.4-1.el9
[2025-11-26 05:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:48:33] c6-12-27-1.aglt2.org
[2025-11-26 05:48:33] apptainer works
[2025-11-26 05:48:33] Set ATHENA_PROC_NUMBER=9
[2025-11-26 05:48:33] Set ATHENA_CORE_NUMBER=9
[2025-11-26 05:48:34] Starting ATLAS job with PandaID=6897139519
[2025-11-26 05:48:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:13 (731256): BOINC client no longer exists - exiting
07:40:13 (731256): timer handler: client dead, exiting
07:48:09 (1249040): wrapper (7.7.26015): starting
07:48:09 (1249040): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 07:48:09] Arguments: --nthreads 8
[2025-11-26 07:48:09] Threads: 8
[2025-11-26 07:48:09] This job has been restarted, cleaning up previous attempt
[2025-11-26 07:48:09] Checking for CVMFS
[2025-11-26 07:48:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:48:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:48:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:48:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:48:10] 2.13.3.0 11900 30070 396584 153322 1 668 30817014 32935937 33081 16776704 0 161141885 99.511 198929568 33882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 07:48:10] CVMFS is ok
[2025-11-26 07:48:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 07:48:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 07:48:10] Further information can be found at the LHC@home message board.
[2025-11-26 07:48:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:48:10] Checking for apptainer binary...
[2025-11-26 07:48:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:48:10] Running /usr/bin/apptainer --version
[2025-11-26 07:48:10] apptainer version 1.4.4-1.el9
[2025-11-26 07:48:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:48:10] c6-12-27-1.aglt2.org
[2025-11-26 07:48:10] apptainer works
[2025-11-26 07:48:10] Set ATHENA_PROC_NUMBER=8
[2025-11-26 07:48:10] Set ATHENA_CORE_NUMBER=8
[2025-11-26 07:48:10] Starting ATLAS job with PandaID=6897139519
[2025-11-26 07:48:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:58:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:58:04] 2025-11-27 11:57:17,966 | INFO     | time since job start (83334s) is within the limit (172800.0s)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,290 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 06:58:04] 2025-11-27 11:57:18,351 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2700.2618958333333
[2025-11-27 06:58:04] 2025-11-27 11:57:18,458 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897139519/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,459 | INFO     | extracted standard info from prmon json
[2025-11-27 06:58:04] 2025-11-27 11:57:18,459 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:58:04] 2025-11-27 11:57:18,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:58:04] 2025-11-27 11:57:18,482 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:58:04] 2025-11-27 11:57:18,484 | INFO     | sum of square deviations: 788664390401.5962
[2025-11-27 06:58:04] 2025-11-27 11:57:18,519 | INFO     | sum of deviations: 3416079267204.3047
[2025-11-27 06:58:04] 2025-11-27 11:57:18,520 | INFO     | mean x: 1764202940.7985349
[2025-11-27 06:58:04] 2025-11-27 11:57:18,520 | INFO     | mean y: 2935934.6556776557
[2025-11-27 06:58:04] 2025-11-27 11:57:18,520 | INFO     | intersect: -7638663156.858904
[2025-11-27 06:58:04] 2025-11-27 11:57:18,521 | INFO     | chi2: 9.306031546563334
[2025-11-27 06:58:04] 2025-11-27 11:57:18,523 | INFO     | sum of square deviations: 780030937752.2953
[2025-11-27 06:58:04] 2025-11-27 11:57:18,558 | INFO     | sum of deviations: 3881566510607.213
[2025-11-27 06:58:04] 2025-11-27 11:57:18,559 | INFO     | mean x: 1764202788.3088236
[2025-11-27 06:58:04] 2025-11-27 11:57:18,559 | INFO     | mean y: 2944157.456617647
[2025-11-27 06:58:04] 2025-11-27 11:57:18,559 | INFO     | intersect: -8776028739.120966
[2025-11-27 06:58:04] 2025-11-27 11:57:18,560 | INFO     | chi2: 6.158834346873148
[2025-11-27 06:58:04] 2025-11-27 11:57:18,561 | INFO     | current chi2=6.158834346873148 (change=33.81889674393408 %)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,562 | INFO     | sum of square deviations: 771460742102.7004
[2025-11-27 06:58:04] 2025-11-27 11:57:18,596 | INFO     | sum of deviations: 4300463004183.3174
[2025-11-27 06:58:04] 2025-11-27 11:57:18,596 | INFO     | mean x: 1764202635.819188
[2025-11-27 06:58:04] 2025-11-27 11:57:18,596 | INFO     | mean y: 2951606.372693727
[2025-11-27 06:58:04] 2025-11-27 11:57:18,597 | INFO     | intersect: -9831493302.05417
[2025-11-27 06:58:04] 2025-11-27 11:57:18,598 | INFO     | chi2: 3.3728070109714223
[2025-11-27 06:58:04] 2025-11-27 11:57:18,599 | INFO     | current chi2=3.3728070109714223 (change=45.236276525544106 %)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,600 | INFO     | sum of square deviations: 762953405833.63
[2025-11-27 06:58:04] 2025-11-27 11:57:18,639 | INFO     | sum of deviations: 4505449021952.483
[2025-11-27 06:58:04] 2025-11-27 11:57:18,639 | INFO     | mean x: 1764202483.3281481
[2025-11-27 06:58:04] 2025-11-27 11:57:18,639 | INFO     | mean y: 2955279.82962963
[2025-11-27 06:58:04] 2025-11-27 11:57:18,640 | INFO     | intersect: -10415144033.000761
[2025-11-27 06:58:04] 2025-11-27 11:57:18,641 | INFO     | chi2: 2.619526259051083
[2025-11-27 06:58:04] 2025-11-27 11:57:18,642 | INFO     | current chi2=2.619526259051083 (change=22.333941712940835 %)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,642 | INFO     | right removable region: 1349
[2025-11-27 06:58:04] 2025-11-27 11:57:18,643 | INFO     | sum of square deviations: 780029853164.3936
[2025-11-27 06:58:04] 2025-11-27 11:57:18,682 | INFO     | sum of deviations: 3063674623073.3687
[2025-11-27 06:58:04] 2025-11-27 11:57:18,682 | INFO     | mean x: 1764203093.297794
[2025-11-27 06:58:04] 2025-11-27 11:57:18,682 | INFO     | mean y: 2942151.786764706
[2025-11-27 06:58:04] 2025-11-27 11:57:18,682 | INFO     | intersect: -6926208347.976072
[2025-11-27 06:58:04] 2025-11-27 11:57:18,684 | INFO     | chi2: 7.311729282114133
[2025-11-27 06:58:04] 2025-11-27 11:57:18,684 | INFO     | current chi2=7.311729282114133 (change=21.430211733869374 %)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,684 | INFO     | left removable region: 10
[2025-11-27 06:58:04] 2025-11-27 11:57:18,686 | INFO     | sum of square deviations: 744455725365.8562
[2025-11-27 06:58:04] 2025-11-27 11:57:18,724 | INFO     | sum of deviations: 4045007438439.5933
[2025-11-27 06:58:04] 2025-11-27 11:57:18,725 | INFO     | mean x: 1764202757.8312173
[2025-11-27 06:58:04] 2025-11-27 11:57:18,725 | INFO     | mean y: 2964513.622106049
[2025-11-27 06:58:04] 2025-11-27 11:57:18,725 | INFO     | intersect: -9582848363.075012
[2025-11-27 06:58:04] 2025-11-27 11:57:18,727 | INFO     | chi2: 0.4091351430577789
[2025-11-27 06:58:04] 2025-11-27 11:57:18,727 | INFO     | current memory leak: 5.43 B/s (using 1339 data points, chi2=0.41)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,729 | INFO     | could have reported an average CPU frequency of 2665 MHz (49 samples)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | ..............................
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . Timing measurements:
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . get job = 0 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . initial setup = 1 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . payload setup = 7 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . stage-in = 0 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . payload execution = 83273 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . stage-out = 8 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | . log creation = 1 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,730 | INFO     | ..............................
[2025-11-27 06:58:04] 2025-11-27 11:57:18,914 | INFO     | 
[2025-11-27 06:58:04] 2025-11-27 11:57:18,914 | INFO     | job summary report
[2025-11-27 06:58:04] 2025-11-27 11:57:18,914 | INFO     | --------------------------------------------------
[2025-11-27 06:58:04] 2025-11-27 11:57:18,914 | INFO     | PanDA job id: 6897139519
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | task id: 47556161
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | errors: (none)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | pilot state: finished 
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | transexitcode: 0
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | exeerrorcode: 0
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | exeerrordiag: 
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | exitcode: 0
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | exitmsg: OK
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | cpuconsumptiontime: 267446 s
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | nevents: 1000
[2025-11-27 06:58:04] 2025-11-27 11:57:18,915 | INFO     | neventsw: 0
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | pid: 1309765
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | pgrp: 1309765
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | corecount: 8
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | event service: False
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | sizes: {0: 2284094, 1: 2284293, 6: 2284555, 12: 2284583, 83285: 2347076, 83286: 2347075, 83295: 2356253, 83298: 2356309, 83319: 2356555}
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | --------------------------------------------------
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | 
[2025-11-27 06:58:04] 2025-11-27 11:57:18,916 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 06:58:04] 2025-11-27 11:57:18,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,944 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,944 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,944 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:58:04] 2025-11-27 11:57:18,946 | INFO     | job 6897139519 has completed (purged errors)
[2025-11-27 06:58:04] 2025-11-27 11:57:18,946 | INFO     | overall cleanup function is called
[2025-11-27 06:58:04] 2025-11-27 11:57:20,036 | INFO     | --- collectZombieJob: --- 10, [1309765]
[2025-11-27 06:58:04] 2025-11-27 11:57:20,037 | INFO     | zombie collector waiting for pid 1309765
[2025-11-27 06:58:04] 2025-11-27 11:57:20,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:58:04] 2025-11-27 11:57:20,041 | INFO     | collected zombie processes
[2025-11-27 06:58:04] 2025-11-27 11:57:20,041 | INFO     | will attempt to kill all subprocesses of pid=1309765
[2025-11-27 06:58:04] 2025-11-27 11:57:21,082 | INFO     | process IDs to be killed: [1309765] (in reverse order)
[2025-11-27 06:58:04] 2025-11-27 11:57:21,352 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:58:04] 2025-11-27 11:57:21,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:58:04] 2025-11-27 11:57:21,401 | INFO     | did not find any defunct processes belonging to 1309765
[2025-11-27 06:58:04] 2025-11-27 11:57:21,440 | INFO     | did not find any defunct processes belonging to 1309765
[2025-11-27 06:58:04] 2025-11-27 11:57:21,443 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:58:04] 2025-11-27 11:57:21,443 | INFO     | ready for new job
[2025-11-27 06:58:04] 2025-11-27 11:57:21,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:58:04] 2025-11-27 11:57:21,449 | INFO     | ***************************************
[2025-11-27 06:58:04] 2025-11-27 11:57:21,450 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:58:04] 2025-11-27 11:57:21,450 | INFO     | ***************************************
[2025-11-27 06:58:04] 2025-11-27 11:57:21,450 | INFO     | 
[2025-11-27 06:58:04] 2025-11-27 11:57:21,455 | INFO     | architecture information:
[2025-11-27 06:58:04] 2025-11-27 11:57:21,456 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:58:04] 2025-11-27 11:57:21,535 | INFO     | cat /etc/os-release:
[2025-11-27 06:58:04] NAME="CentOS Linux"
[2025-11-27 06:58:04] VERSION="7 (Core)"
[2025-11-27 06:58:04] ID="centos"
[2025-11-27 06:58:04] ID_LIKE="rhel fedora"
[2025-11-27 06:58:04] VERSION_ID="7"
[2025-11-27 06:58:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:58:04] ANSI_COLOR="0;31"
[2025-11-27 06:58:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:58:04] HOME_URL="https://www.centos.org/"
[2025-11-27 06:58:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:58:04] 
[2025-11-27 06:58:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:58:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:58:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:58:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:58:04] 
[2025-11-27 06:58:04] 2025-11-27 11:57:21,536 | INFO     | ***************************************
[2025-11-27 06:58:04] 2025-11-27 11:57:22,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 06:58:04] 2025-11-27 11:57:22,070 | INFO     | sufficient remaining disk space (87354769408 B)
[2025-11-27 06:58:04] 2025-11-27 11:57:22,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:58:04] 2025-11-27 11:57:22,070 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:58:04] 2025-11-27 11:57:22,070 | INFO     | update_server=False
[2025-11-27 06:58:04] 2025-11-27 11:57:22,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:58:04] 2025-11-27 11:57:22,204 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 06:58:04] 2025-11-27 11:57:22,205 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 06:58:04] 2025-11-27 11:57:22,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:22,205 | INFO     | will abort loop
[2025-11-27 06:58:04] 2025-11-27 11:57:22,312 | INFO     | all payload control threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:57:22,380 | INFO     | all data control threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:57:22,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:22,537 | INFO     | all job control threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:57:23,086 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,211 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,318 | INFO     | [payload] control thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,395 | INFO     | [data] control thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:23,535 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,543 | INFO     | [job] control thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,687 | INFO     | [job] validate thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,743 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,795 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:23,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:58:04] 2025-11-27 11:57:24,115 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:24,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:24,253 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:24,346 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:24,939 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:25,535 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:26,407 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:58:04] 2025-11-27 11:57:53,474 | INFO     | PID=1271474 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:58:04] 2025-11-27 11:57:53,475 | INFO     | .. there are 59 such processes running
[2025-11-27 06:58:04] 2025-11-27 11:57:53,475 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:58:04] 2025-11-27 11:57:53,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:58:04] 2025-11-27 11:57:53,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:58:04] 2025-11-27 11:57:54,957 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:58:04] 2025-11-27 11:57:56,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809214764864)>', '<ExcThread(monitor, started 139808861038336)>']
[2025-11-27 06:58:04] 2025-11-27 11:57:57,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:58:04] 2025-11-27 11:57:57,499 | INFO     | [monitor] control thread has ended
[2025-11-27 06:58:04] 2025-11-27 11:58:01,820 | INFO     | all workflow threads have been joined
[2025-11-27 06:58:04] 2025-11-27 11:58:01,820 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:58:04] 2025-11-27 11:58:01,821 | INFO     | traces error code: 0
[2025-11-27 06:58:04] 2025-11-27 11:58:01,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:58:04] 2025-11-27 11:58:03,046 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:58:04] 2025-11-27 11:58:03,072 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:58:04] 2025-11-27 11:58:03,091 [wrapper] pilotpid: 1271474
[2025-11-27 06:58:04] 2025-11-27 11:58:03,182 [wrapper] Pilot exit status: 0
[2025-11-27 06:58:04] 2025-11-27 11:58:03,332 [wrapper] pandaids: 6897139519 6897139519 6897139519
[2025-11-27 06:58:04] 2025-11-27 11:58:03,572 [wrapper] cleanup supervisor_pilot  165565 1271476
[2025-11-27 06:58:04] 2025-11-27 11:58:03,596 [wrapper] Test setup, not cleaning
[2025-11-27 06:58:04] 2025-11-27 11:58:03,612 [wrapper] apfmon messages muted
[2025-11-27 06:58:04] 2025-11-27 11:58:03,625 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:58:04] 2025-11-27 11:58:03,640 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:58:04]  *** Error codes and diagnostics ***
[2025-11-27 06:58:04]     "exeErrorCode": 0,
[2025-11-27 06:58:04]     "exeErrorDiag": "",
[2025-11-27 06:58:04]     "pilotErrorCode": 0,
[2025-11-27 06:58:04]     "pilotErrorDiag": "",
[2025-11-27 06:58:04]  *** Listing of results directory ***
[2025-11-27 06:58:04] total 1723512
[2025-11-27 06:58:04] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 06:58:04] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:58:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-27 06:58:04] -rw-r--r--. 3 boincer umatlas 408887357 Nov 26 00:00 EVNT.47483658._002182.pool.root.1
[2025-11-27 06:58:04] -rw-r--r--. 3 boincer umatlas 408887357 Nov 26 00:00 ATLAS.root_0
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 00:00 input.tar.gz
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 06:58:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 07:48 pandaJob.out
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas        57 Nov 26 07:48 setup.sh.local
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas    991830 Nov 26 07:48 agis_schedconf.cvmfs.json
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:38 boinc_task_state.xml
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      6881 Nov 27 06:55 init_data.xml
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas 919219030 Nov 27 06:55 HITS.47556161._001656.pool.root.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas      1059 Nov 27 06:56 memory_monitor_summary.json
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas   2332895 Nov 27 06:56 log.47556161._001656.job.log.tgz.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas        96 Nov 27 06:56 pilot_heartbeat.json
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas      8620 Nov 27 06:57 heartbeat.json
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:57 boinc_mmap_file
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:57 wrapper_checkpoint.txt
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas      5010 Nov 27 06:58 pilotlog.txt
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas   9640605 Nov 27 06:58 log.47556161._001656.job.log.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas       353 Nov 27 06:58 output.list
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:58 runtime_log
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas  11991040 Nov 27 06:58 result.tar.gz
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas      9438 Nov 27 06:58 runtime_log.err
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas       913 Nov 27 06:58 dcKODmUWBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRUMKDmto8GVm.diag
[2025-11-27 06:58:04] -rw-r--r--. 1 boincer umatlas     25891 Nov 27 06:58 stderr.txt
[2025-11-27 06:58:04] HITS file was successfully produced:
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas 919219030 Nov 27 06:55 shared/HITS.pool.root.1
[2025-11-27 06:58:04]  *** Contents of shared directory: ***
[2025-11-27 06:58:04] total 1309300
[2025-11-27 06:58:04] -rw-r--r--. 3 boincer umatlas 408887357 Nov 26 00:00 ATLAS.root_0
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 00:00 input.tar.gz
[2025-11-27 06:58:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas 919219030 Nov 27 06:55 HITS.pool.root.1
[2025-11-27 06:58:04] -rw-------. 1 boincer umatlas  11991040 Nov 27 06:58 result.tar.gz
06:58:05 (1249040): run_atlas exited; CPU time 270988.686381
06:58:05 (1249040): called boinc_finish(0)

</stderr_txt>
]]>

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