Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:49:19 (2651818): wrapper (7.7.26015): starting
21:49:19 (2651818): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:49:19] Arguments: --nthreads 8
[2025-11-25 21:49:19] Threads: 8
[2025-11-25 21:49:19] Checking for CVMFS
[2025-11-25 21:49:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:49:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:49:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:49:21] 2.13.3.0 7109 29448 334540 153305 1 144 15878196 21042177 25367 16776704 0 125301052 99.482 157891189 31402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:49:21] CVMFS is ok
[2025-11-25 21:49:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:49:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:49:21] Further information can be found at the LHC@home message board.
[2025-11-25 21:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:49:21] Checking for apptainer binary...
[2025-11-25 21:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:49:21] Running /usr/bin/apptainer --version
[2025-11-25 21:49:21] apptainer version 1.4.4-1.el9
[2025-11-25 21:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:49:22] c-16-11.aglt2.org
[2025-11-25 21:49:22] apptainer works
[2025-11-25 21:49:22] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:49:22] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:49:22] Starting ATLAS job with PandaID=6897139628
[2025-11-25 21:49:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:12:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:12:48] 2025-11-27 14:18:23,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:12:48] 2025-11-27 14:18:24,288 | INFO     | PID=2661132 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:12:48] 2025-11-27 14:18:24,288 | INFO     | .. there are 44 such processes running
[2025-11-27 10:12:48] 2025-11-27 14:18:25,291 | INFO     | time since job start (127677s) is within the limit (172800.0s)
[2025-11-27 10:12:48] 2025-11-27 14:18:26,431 | INFO     | monitor loop #7058: job 0:6897139628 is in state 'finished'
[2025-11-27 10:12:48] 2025-11-27 14:18:26,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:12:48] 2025-11-27 14:18:27,297 | INFO     | time since job start (127679s) is within the limit (172800.0s)
[2025-11-27 10:12:48] 2025-11-27 14:18:28,966 | INFO     | monitor loop #7059: job 0:6897139628 is in state 'finished'
[2025-11-27 10:12:48] 2025-11-27 14:18:29,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:12:48] 2025-11-27 14:18:29,331 | INFO     | time since job start (127681s) is within the limit (172800.0s)
[2025-11-27 10:12:48] 2025-11-27 14:18:31,338 | INFO     | time since job start (127683s) is within the limit (172800.0s)
[2025-11-27 10:12:48] 2025-11-27 14:18:31,642 | INFO     | monitor loop #7060: job 0:6897139628 is in state 'finished'
[2025-11-27 10:12:48] 2025-11-27 14:18:31,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:12:48] 2025-11-27 14:18:32,644 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 10:12:48] 2025-11-27 14:18:32,667 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.0326999999997
[2025-11-27 10:12:48] 2025-11-27 14:18:32,695 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6897139628/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:12:48] 2025-11-27 14:18:32,717 | INFO     | extracted standard info from prmon json
[2025-11-27 10:12:48] 2025-11-27 14:18:32,717 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:12:48] 2025-11-27 14:18:32,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:12:48] 2025-11-27 14:18:32,945 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:12:48] 2025-11-27 14:18:32,948 | INFO     | sum of square deviations: 2830981307698.857
[2025-11-27 10:12:48] 2025-11-27 14:18:33,490 | INFO     | time since job start (127685s) is within the limit (172800.0s)
[2025-11-27 10:12:48] 2025-11-27 14:18:33,819 | INFO     | sum of deviations: 5236014544746.357
[2025-11-27 10:12:48] 2025-11-27 14:18:33,819 | INFO     | mean x: 1764189269.3200958
[2025-11-27 10:12:48] 2025-11-27 14:18:33,820 | INFO     | mean y: 2928247.49569378
[2025-11-27 10:12:48] 2025-11-27 14:18:33,820 | INFO     | intersect: -3260011231.7317266
[2025-11-27 10:12:48] 2025-11-27 14:18:33,823 | INFO     | chi2: 32.075464863517595
[2025-11-27 10:12:48] 2025-11-27 14:18:33,830 | INFO     | sum of square deviations: 2810714293829.799
[2025-11-27 10:12:48] 2025-11-27 14:18:34,035 | INFO     | sum of deviations: 5974301960675.895
[2025-11-27 10:12:48] 2025-11-27 14:18:34,038 | INFO     | mean x: 1764189116.8258994
[2025-11-27 10:12:48] 2025-11-27 14:18:34,038 | INFO     | mean y: 2933801.6057553957
[2025-11-27 10:12:48] 2025-11-27 14:18:34,038 | INFO     | intersect: -3746930965.081298
[2025-11-27 10:12:48] 2025-11-27 14:18:34,041 | INFO     | chi2: 28.486913351151582
[2025-11-27 10:12:48] 2025-11-27 14:18:34,042 | INFO     | current chi2=28.486913351151582 (change=11.187839451853451 %)
[2025-11-27 10:12:48] 2025-11-27 14:18:34,046 | INFO     | right removable region: 2084
[2025-11-27 10:12:48] 2025-11-27 14:18:34,049 | INFO     | sum of square deviations: 2810710953216.5073
[2025-11-27 10:12:48] 2025-11-27 14:18:34,271 | INFO     | monitor loop #7061: job 0:6897139628 is in state 'finished'
[2025-11-27 10:12:48] 2025-11-27 14:18:34,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:12:48] 2025-11-27 14:18:34,318 | INFO     | sum of deviations: 4413387741584.857
[2025-11-27 10:12:48] 2025-11-27 14:18:34,319 | INFO     | mean x: 1764189421.8268585
[2025-11-27 10:12:48] 2025-11-27 14:18:34,319 | INFO     | mean y: 2934436.0743405274
[2025-11-27 10:12:48] 2025-11-27 14:18:34,319 | INFO     | intersect: -2767201695.929618
[2025-11-27 10:12:48] 2025-11-27 14:18:34,326 | INFO     | chi2: 28.315568743375348
[2025-11-27 10:12:48] 2025-11-27 14:18:34,326 | INFO     | current chi2=28.315568743375348 (change=11.722031578157194 %)
[2025-11-27 10:12:48] 2025-11-27 14:18:34,327 | INFO     | left removable region: 10
[2025-11-27 10:12:48] 2025-11-27 14:18:34,335 | INFO     | sum of square deviations: 2766461397805.6714
[2025-11-27 10:12:48] 2025-11-27 14:18:34,612 | INFO     | sum of deviations: 4771949303436.29
[2025-11-27 10:12:48] 2025-11-27 14:18:34,612 | INFO     | mean x: 1764189391.340405
[2025-11-27 10:12:48] 2025-11-27 14:18:34,612 | INFO     | mean y: 2944873.4344262294
[2025-11-27 10:12:48] 2025-11-27 14:18:34,613 | INFO     | intersect: -3040156448.6422534
[2025-11-27 10:12:48] 2025-11-27 14:18:34,620 | INFO     | chi2: 22.64378019387662
[2025-11-27 10:12:48] 2025-11-27 14:18:34,620 | INFO     | current memory leak: 1.72 B/s (using 2074 data points, chi2=22.64)
[2025-11-27 10:12:48] 2025-11-27 14:18:34,628 | INFO     | could have reported an average CPU frequency of 2900 MHz (72 samples)
[2025-11-27 10:12:48] 2025-11-27 14:18:34,628 | INFO     | ..............................
[2025-11-27 10:12:48] 2025-11-27 14:18:34,628 | INFO     | . Timing measurements:
[2025-11-27 10:12:48] 2025-11-27 14:18:34,628 | INFO     | . get job = 0 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,628 | INFO     | . initial setup = 4 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,629 | INFO     | . payload setup = 36 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,629 | INFO     | . stage-in = 0 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,629 | INFO     | . payload execution = 127514 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,629 | INFO     | . stage-out = 15 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,629 | INFO     | . log creation = 3 s
[2025-11-27 10:12:48] 2025-11-27 14:18:34,629 | INFO     | ..............................
[2025-11-27 10:12:48] 2025-11-27 14:18:35,554 | INFO     | 
[2025-11-27 10:12:48] 2025-11-27 14:18:35,554 | INFO     | job summary report
[2025-11-27 10:12:48] 2025-11-27 14:18:35,554 | INFO     | --------------------------------------------------
[2025-11-27 10:12:48] 2025-11-27 14:18:35,555 | INFO     | PanDA job id: 6897139628
[2025-11-27 10:12:48] 2025-11-27 14:18:35,559 | INFO     | task id: 47556173
[2025-11-27 10:12:48] 2025-11-27 14:18:35,559 | INFO     | errors: (none)
[2025-11-27 10:12:48] 2025-11-27 14:18:35,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:12:48] 2025-11-27 14:18:35,559 | INFO     | pilot state: finished 
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | transexitcode: 0
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | exeerrorcode: 0
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | exeerrordiag: 
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | exitcode: 0
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | exitmsg: OK
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | cpuconsumptiontime: 509961 s
[2025-11-27 10:12:48] 2025-11-27 14:18:35,560 | INFO     | nevents: 1000
[2025-11-27 10:12:48] 2025-11-27 14:18:35,561 | INFO     | neventsw: 0
[2025-11-27 10:12:48] 2025-11-27 14:18:35,561 | INFO     | pid: 2677060
[2025-11-27 10:12:48] 2025-11-27 14:18:35,561 | INFO     | pgrp: 2677060
[2025-11-27 10:12:48] 2025-11-27 14:18:35,561 | INFO     | corecount: 8
[2025-11-27 10:12:48] 2025-11-27 14:18:35,561 | INFO     | event service: False
[2025-11-27 10:12:48] 2025-11-27 14:18:35,561 | INFO     | sizes: {0: 2284036, 1: 2284120, 2: 2284319, 3: 2284319, 13: 2284347, 24: 2284403, 28: 2284821, 35: 2284849, 127555: 2366822, 127557: 2366821, 127573: 2375871, 1275
[2025-11-27 10:12:48] 2025-11-27 14:18:35,562 | INFO     | --------------------------------------------------
[2025-11-27 10:12:48] 2025-11-27 14:18:35,562 | INFO     | 
[2025-11-27 10:12:48] 2025-11-27 14:18:35,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 10:12:48] 2025-11-27 14:18:35,584 | INFO     | time since job start (127687s) is within the limit (172800.0s)
[2025-11-27 10:12:48] 2025-11-27 14:18:35,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:12:48] 2025-11-27 14:18:35,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:12:48] 2025-11-27 14:18:35,634 | INFO     | job 6897139628 has completed (purged errors)
[2025-11-27 10:12:48] 2025-11-27 14:18:35,645 | INFO     | overall cleanup function is called
[2025-11-27 10:12:48] 2025-11-27 14:18:36,758 | INFO     | --- collectZombieJob: --- 10, [2677060]
[2025-11-27 10:12:48] 2025-11-27 14:18:36,758 | INFO     | zombie collector waiting for pid 2677060
[2025-11-27 10:12:48] 2025-11-27 14:18:36,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:12:48] 2025-11-27 14:18:36,758 | INFO     | collected zombie processes
[2025-11-27 10:12:48] 2025-11-27 14:18:36,758 | INFO     | will attempt to kill all subprocesses of pid=2677060
[2025-11-27 10:12:48] 2025-11-27 14:18:38,514 | INFO     | process IDs to be killed: [2677060] (in reverse order)
[2025-11-27 10:12:48] 2025-11-27 14:18:38,924 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:12:48] 2025-11-27 14:18:38,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:12:48] 2025-11-27 14:18:39,040 | INFO     | did not find any defunct processes belonging to 2677060
[2025-11-27 10:12:48] 2025-11-27 14:18:39,126 | INFO     | did not find any defunct processes belonging to 2677060
[2025-11-27 10:12:48] 2025-11-27 14:18:39,137 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:12:48] 2025-11-27 14:18:39,138 | INFO     | ready for new job
[2025-11-27 10:12:48] 2025-11-27 14:18:39,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:12:48] 2025-11-27 14:18:39,162 | INFO     | ***************************************
[2025-11-27 10:12:48] 2025-11-27 14:18:39,163 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:12:48] 2025-11-27 14:18:39,163 | INFO     | ***************************************
[2025-11-27 10:12:48] 2025-11-27 14:18:39,163 | INFO     | 
[2025-11-27 10:12:48] 2025-11-27 14:18:39,166 | INFO     | architecture information:
[2025-11-27 10:12:48] 2025-11-27 14:18:39,167 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:12:48] 2025-11-27 14:18:39,223 | INFO     | cat /etc/os-release:
[2025-11-27 10:12:48] NAME="CentOS Linux"
[2025-11-27 10:12:48] VERSION="7 (Core)"
[2025-11-27 10:12:48] ID="centos"
[2025-11-27 10:12:48] ID_LIKE="rhel fedora"
[2025-11-27 10:12:48] VERSION_ID="7"
[2025-11-27 10:12:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:12:48] ANSI_COLOR="0;31"
[2025-11-27 10:12:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:12:48] HOME_URL="https://www.centos.org/"
[2025-11-27 10:12:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:12:48] 
[2025-11-27 10:12:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:12:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:12:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:12:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:12:48] 
[2025-11-27 10:12:48] 2025-11-27 14:18:39,223 | INFO     | ***************************************
[2025-11-27 10:12:48] 2025-11-27 14:18:39,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 10:12:48] 2025-11-27 14:18:39,950 | INFO     | sufficient remaining disk space (48262807552 B)
[2025-11-27 10:12:48] 2025-11-27 14:18:39,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:12:48] 2025-11-27 14:18:39,950 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:12:48] 2025-11-27 14:18:39,950 | INFO     | update_server=False
[2025-11-27 10:12:48] 2025-11-27 14:18:39,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:12:48] 2025-11-27 14:18:39,951 | INFO     | all payload control threads have been joined
[2025-11-27 10:12:48] 2025-11-27 14:18:39,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:12:48] 2025-11-27 14:18:40,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:12:48] 2025-11-27 14:18:40,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:12:48] 2025-11-27 14:18:40,519 | INFO     | aborting loop
[2025-11-27 10:12:48] 2025-11-27 14:18:40,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:12:48] 2025-11-27 14:18:40,689 | INFO     | all data control threads have been joined
[2025-11-27 10:12:48] 2025-11-27 14:18:40,909 | INFO     | all job control threads have been joined
[2025-11-27 10:12:48] 2025-11-27 14:18:40,956 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:40,967 | INFO     | [payload] control thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,038 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,087 | INFO     | [job] validate thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,112 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,116 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,117 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,406 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,534 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,578 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,706 | INFO     | [data] control thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,914 | INFO     | [job] control thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:41,962 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:42,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:42,442 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:18:44,485 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:12:48] 2025-11-27 14:19:10,535 | INFO     | PID=2661132 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:12:48] 2025-11-27 14:19:10,535 | INFO     | .. there are 44 such processes running
[2025-11-27 10:12:48] 2025-11-27 14:19:10,536 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:12:48] 2025-11-27 14:19:10,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:12:48] 2025-11-27 14:19:10,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:12:48] 2025-11-27 14:19:26,806 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:12:48] 2025-11-27 14:19:28,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077821163328)>', '<ExcThread(monitor, started 140077321672448)>']
[2025-11-27 10:12:48] 2025-11-27 14:19:28,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:12:48] 2025-11-27 14:19:28,726 | INFO     | [monitor] control thread has ended
[2025-11-27 10:12:48] 2025-11-27 14:19:33,130 | INFO     | all workflow threads have been joined
[2025-11-27 10:12:48] 2025-11-27 14:19:33,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:12:48] 2025-11-27 14:19:33,131 | INFO     | traces error code: 0
[2025-11-27 10:12:48] 2025-11-27 14:19:33,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:12:48] 2025-11-27 14:19:33,524 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:12:48] 2025-11-27 14:19:33,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:12:48] 2025-11-27 14:19:33,692 [wrapper] pilotpid: 2661132
[2025-11-27 10:12:48] 2025-11-27 14:19:33,759 [wrapper] Pilot exit status: 0
[2025-11-27 10:12:48] 2025-11-27 14:19:33,918 [wrapper] pandaids: 6897139628
[2025-11-27 10:12:48] 2025-11-27 14:19:35,395 [wrapper] cleanup supervisor_pilot 2212874 2661133
[2025-11-27 10:12:48] 2025-11-27 14:19:35,497 [wrapper] Test setup, not cleaning
[2025-11-27 10:12:48] 2025-11-27 14:19:35,557 [wrapper] apfmon messages muted
[2025-11-27 10:12:48] 2025-11-27 14:19:35,593 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:12:48] 2025-11-27 14:19:35,619 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:12:48]  *** Error codes and diagnostics ***
[2025-11-27 10:12:48]     "exeErrorCode": 0,
[2025-11-27 10:12:48]     "exeErrorDiag": "",
[2025-11-27 10:12:48]     "pilotErrorCode": 0,
[2025-11-27 10:12:48]     "pilotErrorDiag": "",
[2025-11-27 10:12:48]  *** Listing of results directory ***
[2025-11-27 10:12:48] total 1327920
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 10:12:48] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:12:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:49 run_atlas
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:49 job.xml
[2025-11-27 10:12:48] -rw-r--r--. 2 boincer umatlas 405555755 Nov 25 21:49 EVNT.47483658._003086.pool.root.1
[2025-11-27 10:12:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:49 start_atlas.sh
[2025-11-27 10:12:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:49 shared
[2025-11-27 10:12:48] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 21:49 input.tar.gz
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:49 boinc_lockfile
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 21:49 pandaJob.out
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas        57 Nov 25 21:49 setup.sh.local
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas    991877 Nov 25 21:50 agis_schedconf.cvmfs.json
[2025-11-27 10:12:48] drwx------. 5 boincer umatlas      4096 Nov 25 21:50 pilot3
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas       533 Nov 27 08:19 boinc_task_state.xml
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas 913893651 Nov 27 09:14 HITS.47556173._000689.pool.root.1
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas      1057 Nov 27 09:17 memory_monitor_summary.json
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas   2895782 Nov 27 09:17 log.47556173._000689.job.log.tgz.1
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas      8620 Nov 27 09:18 heartbeat.json
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas        95 Nov 27 09:19 pilot_heartbeat.json
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas      4824 Nov 27 09:19 pilotlog.txt
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas  15316345 Nov 27 09:19 log.47556173._000689.job.log.1
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas       353 Nov 27 09:19 output.list
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:19 runtime_log
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas  18227200 Nov 27 09:19 result.tar.gz
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas      9339 Nov 27 09:19 runtime_log.err
[2025-11-27 10:12:48] -rw-------. 1 boincer umatlas       663 Nov 27 09:19 6qYLDmcWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2YJKDmBPOqTn.diag
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas      6525 Nov 27 10:12 init_data.xml
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:12 boinc_mmap_file
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:12 wrapper_checkpoint.txt
[2025-11-27 10:12:48] -rw-r--r--. 1 boincer umatlas     21908 Nov 27 10:12 stderr.txt
[2025-11-27 10:12:49] HITS file was successfully produced:
[2025-11-27 10:12:49] -rw-------. 1 boincer umatlas 913893651 Nov 27 09:14 shared/HITS.pool.root.1
[2025-11-27 10:12:49]  *** Contents of shared directory: ***
[2025-11-27 10:12:49] total 1306932
[2025-11-27 10:12:49] -rw-r--r--. 2 boincer umatlas 405555755 Nov 25 21:49 ATLAS.root_0
[2025-11-27 10:12:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:49 start_atlas.sh
[2025-11-27 10:12:49] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 21:49 input.tar.gz
[2025-11-27 10:12:49] -rw-------. 1 boincer umatlas 913893651 Nov 27 09:14 HITS.pool.root.1
[2025-11-27 10:12:49] -rw-------. 1 boincer umatlas  18227200 Nov 27 09:19 result.tar.gz
10:12:50 (2651818): run_atlas exited; CPU time 516240.635484
10:12:50 (2651818): called boinc_finish(0)

</stderr_txt>
]]>

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