Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:26:42 (5665): wrapper (7.7.26015): starting
21:26:42 (5665): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 21:26:42] Arguments: --nthreads 12
[2025-11-25 21:26:42] Threads: 12
[2025-11-25 21:26:42] Checking for CVMFS
[2025-11-25 21:26:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:26:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:26:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:26:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:26:43] 2.11.2.0 723 117027 92392 153305 1 56 18461444 20275200 1 130560 0 50282059 99.904 6811108 33639 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 21:26:43] CVMFS is ok
[2025-11-25 21:26:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:26:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:26:43] Further information can be found at the LHC@home message board.
[2025-11-25 21:26:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:26:43] Checking for apptainer binary...
[2025-11-25 21:26:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:26:43] Running /usr/bin/apptainer --version
[2025-11-25 21:26:43] apptainer version 1.3.2-1.el7
[2025-11-25 21:26:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:26:44] c-205-1.aglt2.org
[2025-11-25 21:26:44] apptainer works
[2025-11-25 21:26:44] Set ATHENA_PROC_NUMBER=12
[2025-11-25 21:26:44] Set ATHENA_CORE_NUMBER=12
[2025-11-25 21:26:44] Starting ATLAS job with PandaID=6897139417
[2025-11-25 21:26:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:54:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:54:48] 2025-11-26 09:54:04,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 04:54:48] 2025-11-26 09:54:04,901 | INFO     | fitting pss+swap vs Time
[2025-11-26 04:54:48] 2025-11-26 09:54:04,902 | INFO     | sum of square deviations: 26414047906.872643
[2025-11-26 04:54:48] 2025-11-26 09:54:04,906 | INFO     | sum of deviations: 328558912064.4912
[2025-11-26 04:54:48] 2025-11-26 09:54:04,906 | INFO     | mean x: 1764137438.6272728
[2025-11-26 04:54:48] 2025-11-26 09:54:04,907 | INFO     | mean y: 3425263.0090909093
[2025-11-26 04:54:48] 2025-11-26 09:54:04,907 | INFO     | intersect: -21940317688.13485
[2025-11-26 04:54:48] 2025-11-26 09:54:04,907 | INFO     | chi2: 7.078105144677065
[2025-11-26 04:54:48] 2025-11-26 09:54:04,908 | INFO     | sum of square deviations: 25523778526.79079
[2025-11-26 04:54:48] 2025-11-26 09:54:04,912 | INFO     | sum of deviations: 500360987138.9447
[2025-11-26 04:54:48] 2025-11-26 09:54:04,912 | INFO     | mean x: 1764137286.1287355
[2025-11-26 04:54:48] 2025-11-26 09:54:04,912 | INFO     | mean y: 3454662.5724137933
[2025-11-26 04:54:48] 2025-11-26 09:54:04,912 | INFO     | intersect: -34580197323.33828
[2025-11-26 04:54:48] 2025-11-26 09:54:04,913 | INFO     | chi2: 3.9507812674925056
[2025-11-26 04:54:48] 2025-11-26 09:54:04,913 | INFO     | current chi2=3.9507812674925056 (change=44.183066135099665 %)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,913 | INFO     | sum of square deviations: 24653742084.20702
[2025-11-26 04:54:48] 2025-11-26 09:54:04,917 | INFO     | sum of deviations: 594690744200.6886
[2025-11-26 04:54:48] 2025-11-26 09:54:04,917 | INFO     | mean x: 1764137133.6302326
[2025-11-26 04:54:48] 2025-11-26 09:54:04,917 | INFO     | mean y: 3471185.9162790696
[2025-11-26 04:54:48] 2025-11-26 09:54:04,918 | INFO     | intersect: -42550556567.24528
[2025-11-26 04:54:48] 2025-11-26 09:54:04,918 | INFO     | chi2: 2.897152576446975
[2025-11-26 04:54:48] 2025-11-26 09:54:04,918 | INFO     | current chi2=2.897152576446975 (change=26.66886926175619 %)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,919 | INFO     | sum of square deviations: 23803706016.62116
[2025-11-26 04:54:48] 2025-11-26 09:54:04,922 | INFO     | sum of deviations: 605858518063.771
[2025-11-26 04:54:48] 2025-11-26 09:54:04,923 | INFO     | mean x: 1764136981.1317647
[2025-11-26 04:54:48] 2025-11-26 09:54:04,923 | INFO     | mean y: 3473158.5576470587
[2025-11-26 04:54:48] 2025-11-26 09:54:04,923 | INFO     | intersect: -44897829869.78903
[2025-11-26 04:54:48] 2025-11-26 09:54:04,923 | INFO     | chi2: 2.7612524652621886
[2025-11-26 04:54:48] 2025-11-26 09:54:04,923 | INFO     | current chi2=2.7612524652621886 (change=4.690816503404611 %)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,924 | INFO     | right removable region: 424
[2025-11-26 04:54:48] 2025-11-26 09:54:04,924 | INFO     | sum of square deviations: 25523744366.79079
[2025-11-26 04:54:48] 2025-11-26 09:54:04,928 | INFO     | sum of deviations: 172230710142.25745
[2025-11-26 04:54:48] 2025-11-26 09:54:04,928 | INFO     | mean x: 1764137591.1287355
[2025-11-26 04:54:48] 2025-11-26 09:54:04,928 | INFO     | mean y: 3451973.995402299
[2025-11-26 04:54:48] 2025-11-26 09:54:04,928 | INFO     | intersect: -11900705415.391447
[2025-11-26 04:54:48] 2025-11-26 09:54:04,929 | INFO     | chi2: 4.491004103456897
[2025-11-26 04:54:48] 2025-11-26 09:54:04,929 | INFO     | current chi2=4.491004103456897 (change=36.550757417975646 %)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,930 | INFO     | sum of square deviations: 24653673764.207016
[2025-11-26 04:54:48] 2025-11-26 09:54:04,933 | INFO     | sum of deviations: 136796488447.58588
[2025-11-26 04:54:48] 2025-11-26 09:54:04,934 | INFO     | mean x: 1764137743.6302326
[2025-11-26 04:54:48] 2025-11-26 09:54:04,934 | INFO     | mean y: 3458177.7395348838
[2025-11-26 04:54:48] 2025-11-26 09:54:04,934 | INFO     | intersect: -9785259348.685705
[2025-11-26 04:54:48] 2025-11-26 09:54:04,934 | INFO     | chi2: 4.419942096337785
[2025-11-26 04:54:48] 2025-11-26 09:54:04,934 | INFO     | current chi2=4.419942096337785 (change=1.5823189086915508 %)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,935 | INFO     | left removable region: 20
[2025-11-26 04:54:48] 2025-11-26 09:54:04,935 | INFO     | sum of square deviations: 20446598587.512367
[2025-11-26 04:54:48] 2025-11-26 09:54:04,938 | INFO     | sum of deviations: 370879339251.50745
[2025-11-26 04:54:48] 2025-11-26 09:54:04,939 | INFO     | mean x: 1764137560.6361387
[2025-11-26 04:54:48] 2025-11-26 09:54:04,939 | INFO     | mean y: 3516027.581683168
[2025-11-26 04:54:48] 2025-11-26 09:54:04,939 | INFO     | intersect: -31996044683.562515
[2025-11-26 04:54:48] 2025-11-26 09:54:04,939 | INFO     | chi2: 0.041442260115085845
[2025-11-26 04:54:48] 2025-11-26 09:54:04,939 | INFO     | current memory leak: 18.14 B/s (using 404 data points, chi2=0.04)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,940 | INFO     | could have reported an average CPU frequency of 2366 MHz (18 samples)
[2025-11-26 04:54:48] 2025-11-26 09:54:04,940 | INFO     | ..............................
[2025-11-26 04:54:48] 2025-11-26 09:54:04,940 | INFO     | . Timing measurements:
[2025-11-26 04:54:48] 2025-11-26 09:54:04,940 | INFO     | . get job = 0 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,940 | INFO     | . initial setup = 2 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,940 | INFO     | . payload setup = 7 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,941 | INFO     | . stage-in = 0 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,941 | INFO     | . payload execution = 26789 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,941 | INFO     | . stage-out = 3 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,941 | INFO     | . log creation = 0 s
[2025-11-26 04:54:48] 2025-11-26 09:54:04,941 | INFO     | ..............................
[2025-11-26 04:54:48] 2025-11-26 09:54:05,020 | INFO     | 
[2025-11-26 04:54:48] 2025-11-26 09:54:05,020 | INFO     | job summary report
[2025-11-26 04:54:48] 2025-11-26 09:54:05,021 | INFO     | --------------------------------------------------
[2025-11-26 04:54:48] 2025-11-26 09:54:05,021 | INFO     | PanDA job id: 6897139417
[2025-11-26 04:54:48] 2025-11-26 09:54:05,021 | INFO     | task id: 47556161
[2025-11-26 04:54:48] 2025-11-26 09:54:05,021 | INFO     | errors: (none)
[2025-11-26 04:54:48] 2025-11-26 09:54:05,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:54:48] 2025-11-26 09:54:05,021 | INFO     | pilot state: finished 
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | transexitcode: 0
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | exeerrorcode: 0
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | exeerrordiag: 
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | exitcode: 0
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | exitmsg: OK
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | cpuconsumptiontime: 304637 s
[2025-11-26 04:54:48] 2025-11-26 09:54:05,022 | INFO     | nevents: 1000
[2025-11-26 04:54:48] 2025-11-26 09:54:05,023 | INFO     | neventsw: 0
[2025-11-26 04:54:48] 2025-11-26 09:54:05,023 | INFO     | pid: 15889
[2025-11-26 04:54:48] 2025-11-26 09:54:05,023 | INFO     | pgrp: 15889
[2025-11-26 04:54:48] 2025-11-26 09:54:05,023 | INFO     | corecount: 12
[2025-11-26 04:54:48] 2025-11-26 09:54:05,023 | INFO     | event service: False
[2025-11-26 04:54:48] 2025-11-26 09:54:05,023 | INFO     | sizes: {0: 2284265, 5: 2284527, 11: 2284583, 26800: 2322183, 26804: 2331233, 26809: 2331423}
[2025-11-26 04:54:48] 2025-11-26 09:54:05,024 | INFO     | --------------------------------------------------
[2025-11-26 04:54:48] 2025-11-26 09:54:05,024 | INFO     | 
[2025-11-26 04:54:48] 2025-11-26 09:54:05,024 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 04:54:48] 2025-11-26 09:54:05,046 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,047 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,047 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:54:48] 2025-11-26 09:54:05,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:54:48] 2025-11-26 09:54:05,050 | INFO     | job 6897139417 has completed (purged errors)
[2025-11-26 04:54:48] 2025-11-26 09:54:05,050 | INFO     | overall cleanup function is called
[2025-11-26 04:54:48] 2025-11-26 09:54:06,067 | INFO     | --- collectZombieJob: --- 10, [15889]
[2025-11-26 04:54:48] 2025-11-26 09:54:06,067 | INFO     | zombie collector waiting for pid 15889
[2025-11-26 04:54:48] 2025-11-26 09:54:06,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:54:48] 2025-11-26 09:54:06,068 | INFO     | collected zombie processes
[2025-11-26 04:54:48] 2025-11-26 09:54:06,068 | INFO     | will attempt to kill all subprocesses of pid=15889
[2025-11-26 04:54:48] 2025-11-26 09:54:06,163 | INFO     | process IDs to be killed: [15889] (in reverse order)
[2025-11-26 04:54:48] 2025-11-26 09:54:06,215 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:54:48] 2025-11-26 09:54:06,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:54:48] 2025-11-26 09:54:06,218 | INFO     | did not find any defunct processes belonging to 15889
[2025-11-26 04:54:48] 2025-11-26 09:54:06,220 | INFO     | did not find any defunct processes belonging to 15889
[2025-11-26 04:54:48] 2025-11-26 09:54:06,222 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:54:48] 2025-11-26 09:54:06,222 | INFO     | ready for new job
[2025-11-26 04:54:48] 2025-11-26 09:54:06,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:54:48] 2025-11-26 09:54:06,225 | INFO     | ***************************************
[2025-11-26 04:54:48] 2025-11-26 09:54:06,225 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:54:48] 2025-11-26 09:54:06,225 | INFO     | ***************************************
[2025-11-26 04:54:48] 2025-11-26 09:54:06,225 | INFO     | 
[2025-11-26 04:54:48] 2025-11-26 09:54:06,226 | INFO     | architecture information:
[2025-11-26 04:54:48] 2025-11-26 09:54:06,226 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:54:48] 2025-11-26 09:54:06,240 | INFO     | cat /etc/os-release:
[2025-11-26 04:54:48] NAME="CentOS Linux"
[2025-11-26 04:54:48] VERSION="7 (Core)"
[2025-11-26 04:54:48] ID="centos"
[2025-11-26 04:54:48] ID_LIKE="rhel fedora"
[2025-11-26 04:54:48] VERSION_ID="7"
[2025-11-26 04:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:54:48] ANSI_COLOR="0;31"
[2025-11-26 04:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:54:48] HOME_URL="https://www.centos.org/"
[2025-11-26 04:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:54:48] 
[2025-11-26 04:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:54:48] 
[2025-11-26 04:54:48] 2025-11-26 09:54:06,241 | INFO     | ***************************************
[2025-11-26 04:54:48] 2025-11-26 09:54:06,744 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 04:54:48] 2025-11-26 09:54:06,760 | INFO     | sufficient remaining disk space (28352446464 B)
[2025-11-26 04:54:48] 2025-11-26 09:54:06,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:54:48] 2025-11-26 09:54:06,761 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:54:48] 2025-11-26 09:54:06,761 | INFO     | update_server=False
[2025-11-26 04:54:48] 2025-11-26 09:54:06,761 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:54:48] 2025-11-26 09:54:06,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:54:48] 2025-11-26 09:54:07,115 | INFO     | all payload control threads have been joined
[2025-11-26 04:54:48] 2025-11-26 09:54:07,163 | INFO     | all job control threads have been joined
[2025-11-26 04:54:48] 2025-11-26 09:54:07,175 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 04:54:48] 2025-11-26 09:54:07,175 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 04:54:48] 2025-11-26 09:54:07,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:54:48] 2025-11-26 09:54:07,175 | INFO     | will abort loop
[2025-11-26 04:54:48] 2025-11-26 09:54:07,486 | INFO     | all data control threads have been joined
[2025-11-26 04:54:48] 2025-11-26 09:54:07,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:54:48] 2025-11-26 09:54:07,766 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:07,767 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:07,827 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,044 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,120 | INFO     | [payload] control thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,168 | INFO     | [job] control thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,181 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,338 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,491 | INFO     | [data] control thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,565 | INFO     | [job] validate thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,709 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,821 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:08,839 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:09,033 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:09,539 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:10,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:54:48] 2025-11-26 09:54:14,123 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:54:48] 2025-11-26 09:54:37,868 | INFO     | PID=9440 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 04:54:48] 2025-11-26 09:54:37,869 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:54:48] 2025-11-26 09:54:37,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:54:48] 2025-11-26 09:54:37,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:54:48] 2025-11-26 09:54:42,362 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:54:48] 2025-11-26 09:54:42,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975298422592)>', '<ExcThread(monitor, started 139974057916160)>']
[2025-11-26 04:54:48] 2025-11-26 09:54:43,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:54:48] 2025-11-26 09:54:43,900 | INFO     | [monitor] control thread has ended
[2025-11-26 04:54:48] 2025-11-26 09:54:47,980 | INFO     | all workflow threads have been joined
[2025-11-26 04:54:48] 2025-11-26 09:54:47,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:54:48] 2025-11-26 09:54:47,993 | INFO     | traces error code: 0
[2025-11-26 04:54:48] 2025-11-26 09:54:47,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:54:48] 2025-11-26 09:54:48,086 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:54:48] 2025-11-26 09:54:48,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:54:48] 2025-11-26 09:54:48,094 [wrapper] pilotpid: 9440
[2025-11-26 04:54:48] 2025-11-26 09:54:48,098 [wrapper] Pilot exit status: 0
[2025-11-26 04:54:48] 2025-11-26 09:54:48,113 [wrapper] pandaids: 6897139417
[2025-11-26 04:54:48] 2025-11-26 09:54:48,153 [wrapper] cleanup supervisor_pilot 27658 9441
[2025-11-26 04:54:48] 2025-11-26 09:54:48,157 [wrapper] Test setup, not cleaning
[2025-11-26 04:54:48] 2025-11-26 09:54:48,161 [wrapper] apfmon messages muted
[2025-11-26 04:54:48] 2025-11-26 09:54:48,165 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:54:48] 2025-11-26 09:54:48,169 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:54:48]  *** Error codes and diagnostics ***
[2025-11-26 04:54:48]     "exeErrorCode": 0,
[2025-11-26 04:54:48]     "exeErrorDiag": "",
[2025-11-26 04:54:48]     "pilotErrorCode": 0,
[2025-11-26 04:54:48]     "pilotErrorDiag": "",
[2025-11-26 04:54:48]  *** Listing of results directory ***
[2025-11-26 04:54:48] total 1330524
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 04:54:48] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas       100 Nov 25 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:54:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 21:26 run_atlas
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas       105 Nov 25 21:26 job.xml
[2025-11-26 04:54:48] -rw-r--r-- 2 boincer umatlas 410918981 Nov 25 21:26 EVNT.47483658._002177.pool.root.1
[2025-11-26 04:54:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 21:26 start_atlas.sh
[2025-11-26 04:54:48] drwxrwx--x 2 boincer umatlas      4096 Nov 25 21:26 shared
[2025-11-26 04:54:48] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 21:26 input.tar.gz
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas         0 Nov 25 21:26 boinc_lockfile
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 21:26 pandaJob.out
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas        57 Nov 25 21:26 setup.sh.local
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas    991877 Nov 25 21:26 agis_schedconf.cvmfs.json
[2025-11-26 04:54:48] drwx------ 5 boincer umatlas      4096 Nov 25 21:26 pilot3
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas       532 Nov 26 04:41 boinc_task_state.xml
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 04:49 init_data.xml
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas 935714786 Nov 26 04:53 HITS.47556161._001604.pool.root.1
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas      1061 Nov 26 04:53 memory_monitor_summary.json
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas   1516240 Nov 26 04:53 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas   2195606 Nov 26 04:53 log.47556161._001604.job.log.tgz.1
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas      8661 Nov 26 04:54 heartbeat.json
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 04:54 boinc_mmap_file
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas        29 Nov 26 04:54 wrapper_checkpoint.txt
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas        95 Nov 26 04:54 pilot_heartbeat.json
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas      4931 Nov 26 04:54 pilotlog.txt
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas   3751762 Nov 26 04:54 log.47556161._001604.job.log.1
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas       353 Nov 26 04:54 output.list
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas       620 Nov 26 04:54 runtime_log
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas   5969920 Nov 26 04:54 result.tar.gz
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas       669 Nov 26 04:54 xwNKDmUWBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgTMKDmtVdIPm.diag
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas      9340 Nov 26 04:54 runtime_log.err
[2025-11-26 04:54:48] -rw-r--r-- 1 boincer umatlas     21096 Nov 26 04:54 stderr.txt
[2025-11-26 04:54:48] HITS file was successfully produced:
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas 935714786 Nov 26 04:53 shared/HITS.pool.root.1
[2025-11-26 04:54:48]  *** Contents of shared directory: ***
[2025-11-26 04:54:48] total 1321512
[2025-11-26 04:54:48] -rw-r--r-- 2 boincer umatlas 410918981 Nov 25 21:26 ATLAS.root_0
[2025-11-26 04:54:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 21:26 start_atlas.sh
[2025-11-26 04:54:48] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 21:26 input.tar.gz
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas 935714786 Nov 26 04:53 HITS.pool.root.1
[2025-11-26 04:54:48] -rw------- 1 boincer umatlas   5969920 Nov 26 04:54 result.tar.gz
04:54:49 (5665): run_atlas exited; CPU time 296619.629342
04:54:49 (5665): called boinc_finish(0)

</stderr_txt>
]]>

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