Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:04:17 (1563310): wrapper (7.7.26015): starting
22:04:17 (1563310): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 22:04:17] Arguments: --nthreads 9
[2025-11-25 22:04:17] Threads: 9
[2025-11-25 22:04:17] Checking for CVMFS
[2025-11-25 22:04:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:04:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:04:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:04:18] 2.13.3.0 9366 29440 325756 153305 1 118 27214212 32935937 26184 16776704 0 195638764 99.813 93961044 32999 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 22:04:18] CVMFS is ok
[2025-11-25 22:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:04:18] Further information can be found at the LHC@home message board.
[2025-11-25 22:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:04:18] Checking for apptainer binary...
[2025-11-25 22:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 22:04:18] Running /usr/bin/apptainer --version
[2025-11-25 22:04:18] apptainer version 1.4.4-1.el9
[2025-11-25 22:04:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:04:18] c-6-2.aglt2.org
[2025-11-25 22:04:18] apptainer works
[2025-11-25 22:04:18] Set ATHENA_PROC_NUMBER=9
[2025-11-25 22:04:18] Set ATHENA_CORE_NUMBER=9
[2025-11-25 22:04:18] Starting ATLAS job with PandaID=6897139667
[2025-11-25 22:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:22:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:22:02] 2025-11-26 22:21:29,864 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:22:02] 2025-11-26 22:21:29,866 | INFO     | sum of square deviations: 455791424425.3734
[2025-11-26 17:22:02] 2025-11-26 22:21:29,934 | INFO     | sum of deviations: 2730150599276.1577
[2025-11-26 17:22:02] 2025-11-26 22:21:29,934 | INFO     | mean x: 1764160957.3711522
[2025-11-26 17:22:02] 2025-11-26 22:21:29,934 | INFO     | mean y: 3108049.8645558488
[2025-11-26 17:22:02] 2025-11-26 22:21:29,935 | INFO     | intersect: -10564061135.16043
[2025-11-26 17:22:02] 2025-11-26 22:21:29,936 | INFO     | chi2: 12.771778600298859
[2025-11-26 17:22:02] 2025-11-26 22:21:29,938 | INFO     | sum of square deviations: 449805313245.932
[2025-11-26 17:22:02] 2025-11-26 22:21:30,006 | INFO     | sum of deviations: 3141265254121.421
[2025-11-26 17:22:02] 2025-11-26 22:21:30,006 | INFO     | mean x: 1764160804.8772085
[2025-11-26 17:22:02] 2025-11-26 22:21:30,007 | INFO     | mean y: 3118521.981448763
[2025-11-26 17:22:02] 2025-11-26 22:21:30,007 | INFO     | intersect: -12317093969.625381
[2025-11-26 17:22:02] 2025-11-26 22:21:30,008 | INFO     | chi2: 9.51006655950514
[2025-11-26 17:22:02] 2025-11-26 22:21:30,008 | INFO     | current chi2=9.51006655950514 (change=25.53843237399524 %)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,014 | INFO     | sum of square deviations: 443871854216.40686
[2025-11-26 17:22:02] 2025-11-26 22:21:30,074 | INFO     | sum of deviations: 3598579488728.0166
[2025-11-26 17:22:02] 2025-11-26 22:21:30,074 | INFO     | mean x: 1764160652.3833187
[2025-11-26 17:22:02] 2025-11-26 22:21:30,075 | INFO     | mean y: 3130277.1712511093
[2025-11-26 17:22:02] 2025-11-26 22:21:30,075 | INFO     | intersect: -14299358781.737383
[2025-11-26 17:22:02] 2025-11-26 22:21:30,080 | INFO     | chi2: 5.636559414437909
[2025-11-26 17:22:02] 2025-11-26 22:21:30,080 | INFO     | current chi2=5.636559414437909 (change=40.73059973692539 %)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,082 | INFO     | sum of square deviations: 437990746151.0716
[2025-11-26 17:22:02] 2025-11-26 22:21:30,149 | INFO     | sum of deviations: 3945275754014.7036
[2025-11-26 17:22:02] 2025-11-26 22:21:30,149 | INFO     | mean x: 1764160499.8885918
[2025-11-26 17:22:02] 2025-11-26 22:21:30,149 | INFO     | mean y: 3139258.789661319
[2025-11-26 17:22:02] 2025-11-26 22:21:30,150 | INFO     | intersect: -15887834940.012808
[2025-11-26 17:22:02] 2025-11-26 22:21:30,151 | INFO     | chi2: 2.9679232910902957
[2025-11-26 17:22:02] 2025-11-26 22:21:30,151 | INFO     | current chi2=2.9679232910902957 (change=47.34512540596959 %)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,157 | INFO     | sum of square deviations: 432161619668.0342
[2025-11-26 17:22:02] 2025-11-26 22:21:30,200 | INFO     | sum of deviations: 4015632681583.898
[2025-11-26 17:22:02] 2025-11-26 22:21:30,200 | INFO     | mean x: 1764160347.3912265
[2025-11-26 17:22:02] 2025-11-26 22:21:30,201 | INFO     | mean y: 3141098.8057296327
[2025-11-26 17:22:02] 2025-11-26 22:21:30,201 | INFO     | intersect: -16389383420.100807
[2025-11-26 17:22:02] 2025-11-26 22:21:30,202 | INFO     | chi2: 2.74833249363517
[2025-11-26 17:22:02] 2025-11-26 22:21:30,202 | INFO     | current chi2=2.74833249363517 (change=7.398802998525506 %)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,202 | INFO     | right removable region: 1116
[2025-11-26 17:22:02] 2025-11-26 22:21:30,204 | INFO     | sum of square deviations: 449804362255.93195
[2025-11-26 17:22:02] 2025-11-26 22:21:30,236 | INFO     | sum of deviations: 2372771347484.844
[2025-11-26 17:22:02] 2025-11-26 22:21:30,236 | INFO     | mean x: 1764161109.8772085
[2025-11-26 17:22:02] 2025-11-26 22:21:30,236 | INFO     | mean y: 3117144.0636042403
[2025-11-26 17:22:02] 2025-11-26 22:21:30,237 | INFO     | intersect: -9303041899.991995
[2025-11-26 17:22:02] 2025-11-26 22:21:30,238 | INFO     | chi2: 10.375948456375125
[2025-11-26 17:22:02] 2025-11-26 22:21:30,238 | INFO     | current chi2=10.375948456375125 (change=18.75878230356789 %)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,238 | INFO     | left removable region: 10
[2025-11-26 17:22:02] 2025-11-26 22:21:30,240 | INFO     | sum of square deviations: 419519204009.8599
[2025-11-26 17:22:02] 2025-11-26 22:21:30,270 | INFO     | sum of deviations: 3566027095366.778
[2025-11-26 17:22:02] 2025-11-26 22:21:30,271 | INFO     | mean x: 1764160621.8996384
[2025-11-26 17:22:02] 2025-11-26 22:21:30,271 | INFO     | mean y: 3153322.439421338
[2025-11-26 17:22:02] 2025-11-26 22:21:30,271 | INFO     | intersect: -14992690772.758085
[2025-11-26 17:22:02] 2025-11-26 22:21:30,273 | INFO     | chi2: 0.21301478074505767
[2025-11-26 17:22:02] 2025-11-26 22:21:30,273 | INFO     | current memory leak: 8.50 B/s (using 1106 data points, chi2=0.21)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,274 | INFO     | could have reported an average CPU frequency of 2599 MHz (41 samples)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,274 | INFO     | ..............................
[2025-11-26 17:22:02] 2025-11-26 22:21:30,274 | INFO     | . Timing measurements:
[2025-11-26 17:22:02] 2025-11-26 22:21:30,274 | INFO     | . get job = 0 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,274 | INFO     | . initial setup = 2 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,275 | INFO     | . payload setup = 9 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,275 | INFO     | . stage-in = 0 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,275 | INFO     | . payload execution = 69355 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,275 | INFO     | . stage-out = 6 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,275 | INFO     | . log creation = 1 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,275 | INFO     | ..............................
[2025-11-26 17:22:02] 2025-11-26 22:21:30,375 | INFO     | 
[2025-11-26 17:22:02] 2025-11-26 22:21:30,375 | INFO     | job summary report
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | --------------------------------------------------
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | PanDA job id: 6897139667
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | task id: 47556161
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | errors: (none)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | pilot state: finished 
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | transexitcode: 0
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | exeerrorcode: 0
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | exeerrordiag: 
[2025-11-26 17:22:02] 2025-11-26 22:21:30,376 | INFO     | exitcode: 0
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | exitmsg: OK
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | cpuconsumptiontime: 309440 s
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | nevents: 1000
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | neventsw: 0
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | pid: 1573942
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | pgrp: 1573942
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | corecount: 9
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | event service: False
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | sizes: {0: 2284151, 1: 2284293, 7: 2284555, 11: 2284583, 69369: 2341251, 69370: 2341250, 69376: 2350428, 69378: 2350484, 69399: 2350826}
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | --------------------------------------------------
[2025-11-26 17:22:02] 2025-11-26 22:21:30,377 | INFO     | 
[2025-11-26 17:22:02] 2025-11-26 22:21:30,378 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 17:22:02] 2025-11-26 22:21:30,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:22:02] 2025-11-26 22:21:30,409 | INFO     | job 6897139667 has completed (purged errors)
[2025-11-26 17:22:02] 2025-11-26 22:21:30,413 | INFO     | overall cleanup function is called
[2025-11-26 17:22:02] 2025-11-26 22:21:31,443 | INFO     | --- collectZombieJob: --- 10, [1573942]
[2025-11-26 17:22:02] 2025-11-26 22:21:31,443 | INFO     | zombie collector waiting for pid 1573942
[2025-11-26 17:22:02] 2025-11-26 22:21:31,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:22:02] 2025-11-26 22:21:31,444 | INFO     | collected zombie processes
[2025-11-26 17:22:02] 2025-11-26 22:21:31,444 | INFO     | will attempt to kill all subprocesses of pid=1573942
[2025-11-26 17:22:02] 2025-11-26 22:21:32,367 | INFO     | process IDs to be killed: [1573942] (in reverse order)
[2025-11-26 17:22:02] 2025-11-26 22:21:32,556 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:22:02] 2025-11-26 22:21:32,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:22:02] 2025-11-26 22:21:32,610 | INFO     | did not find any defunct processes belonging to 1573942
[2025-11-26 17:22:02] 2025-11-26 22:21:32,633 | INFO     | did not find any defunct processes belonging to 1573942
[2025-11-26 17:22:02] 2025-11-26 22:21:32,635 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:22:02] 2025-11-26 22:21:32,636 | INFO     | ready for new job
[2025-11-26 17:22:02] 2025-11-26 22:21:32,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:22:02] 2025-11-26 22:21:32,641 | INFO     | ***************************************
[2025-11-26 17:22:02] 2025-11-26 22:21:32,642 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:22:02] 2025-11-26 22:21:32,642 | INFO     | ***************************************
[2025-11-26 17:22:02] 2025-11-26 22:21:32,642 | INFO     | 
[2025-11-26 17:22:02] 2025-11-26 22:21:32,644 | INFO     | architecture information:
[2025-11-26 17:22:02] 2025-11-26 22:21:32,645 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:22:02] 2025-11-26 22:21:32,665 | INFO     | cat /etc/os-release:
[2025-11-26 17:22:02] NAME="CentOS Linux"
[2025-11-26 17:22:02] VERSION="7 (Core)"
[2025-11-26 17:22:02] ID="centos"
[2025-11-26 17:22:02] ID_LIKE="rhel fedora"
[2025-11-26 17:22:02] VERSION_ID="7"
[2025-11-26 17:22:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:22:02] ANSI_COLOR="0;31"
[2025-11-26 17:22:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:22:02] HOME_URL="https://www.centos.org/"
[2025-11-26 17:22:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:22:02] 
[2025-11-26 17:22:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:22:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:22:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:22:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:22:02] 
[2025-11-26 17:22:02] 2025-11-26 22:21:32,665 | INFO     | ***************************************
[2025-11-26 17:22:02] 2025-11-26 22:21:33,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 17:22:02] 2025-11-26 22:21:33,234 | INFO     | sufficient remaining disk space (71577894912 B)
[2025-11-26 17:22:02] 2025-11-26 22:21:33,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:22:02] 2025-11-26 22:21:33,235 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:22:02] 2025-11-26 22:21:33,235 | INFO     | update_server=False
[2025-11-26 17:22:02] 2025-11-26 22:21:33,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:22:02] 2025-11-26 22:21:33,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:22:02] 2025-11-26 22:21:33,296 | INFO     | all job control threads have been joined
[2025-11-26 17:22:02] 2025-11-26 22:21:33,617 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 17:22:02] 2025-11-26 22:21:33,618 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 17:22:02] 2025-11-26 22:21:33,618 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:22:02] 2025-11-26 22:21:33,618 | INFO     | will abort loop
[2025-11-26 17:22:02] 2025-11-26 22:21:33,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:22:02] 2025-11-26 22:21:33,888 | INFO     | all data control threads have been joined
[2025-11-26 17:22:02] 2025-11-26 22:21:34,241 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:34,296 | INFO     | [job] validate thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:34,301 | INFO     | [job] control thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:34,468 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:34,624 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:34,654 | INFO     | all payload control threads have been joined
[2025-11-26 17:22:02] 2025-11-26 22:21:34,905 | INFO     | [data] control thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:34,933 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,189 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,242 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,313 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,400 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:22:02] 2025-11-26 22:21:35,411 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,660 | INFO     | [payload] control thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:35,706 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:36,413 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:36,969 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:22:02] 2025-11-26 22:21:37,812 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:22:02] 2025-11-26 22:21:37,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596591671104)>', '<ExcThread(monitor, started 140596240946944)>']
[2025-11-26 17:22:02] 2025-11-26 22:21:42,873 | INFO     | all workflow threads have been joined
[2025-11-26 17:22:02] 2025-11-26 22:21:42,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:22:02] 2025-11-26 22:21:42,874 | INFO     | traces error code: 0
[2025-11-26 17:22:02] 2025-11-26 22:21:42,874 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:22:02] 2025-11-26 22:22:02,319 | INFO     | PID=1567035 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:22:02] 2025-11-26 22:22:02,320 | INFO     | .. there are 44 such processes running
[2025-11-26 17:22:02] 2025-11-26 22:22:02,320 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:22:02] 2025-11-26 22:22:02,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:22:02] 2025-11-26 22:22:02,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:22:02] 2025-11-26 22:22:02,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:22:02] 2025-11-26 22:22:02,320 | INFO     | [monitor] control thread has ended
[2025-11-26 17:22:02] 2025-11-26 22:22:02,458 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:22:02] 2025-11-26 22:22:02,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:22:02] 2025-11-26 22:22:02,464 [wrapper] pilotpid: 1567035
[2025-11-26 17:22:02] 2025-11-26 22:22:02,468 [wrapper] Pilot exit status: 0
[2025-11-26 17:22:02] 2025-11-26 22:22:02,481 [wrapper] pandaids: 6897139667
[2025-11-26 17:22:02] 2025-11-26 22:22:02,573 [wrapper] cleanup supervisor_pilot 1459861 1567036
[2025-11-26 17:22:02] 2025-11-26 22:22:02,576 [wrapper] Test setup, not cleaning
[2025-11-26 17:22:02] 2025-11-26 22:22:02,578 [wrapper] apfmon messages muted
[2025-11-26 17:22:02] 2025-11-26 22:22:02,581 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:22:02] 2025-11-26 22:22:02,583 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:22:02]  *** Error codes and diagnostics ***
[2025-11-26 17:22:02]     "exeErrorCode": 0,
[2025-11-26 17:22:02]     "exeErrorDiag": "",
[2025-11-26 17:22:02]     "pilotErrorCode": 0,
[2025-11-26 17:22:02]     "pilotErrorDiag": "",
[2025-11-26 17:22:02]  *** Listing of results directory ***
[2025-11-26 17:22:02] total 1327872
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 17:22:02] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:22:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 22:04 run_atlas
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 22:04 job.xml
[2025-11-26 17:22:02] -rw-r--r--. 2 boincer umatlas 408431243 Nov 25 22:04 EVNT.47483658._002193.pool.root.1
[2025-11-26 17:22:02] -rw-r--r--. 2 boincer umatlas    590112 Nov 25 22:04 input.tar.gz
[2025-11-26 17:22:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:04 start_atlas.sh
[2025-11-26 17:22:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 22:04 shared
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 22:04 boinc_lockfile
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 22:04 pandaJob.out
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas        57 Nov 25 22:04 setup.sh.local
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas    991877 Nov 25 22:04 agis_schedconf.cvmfs.json
[2025-11-26 17:22:02] drwx------. 5 boincer umatlas      4096 Nov 25 22:04 pilot3
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas       533 Nov 26 16:58 boinc_task_state.xml
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas      6656 Nov 26 17:19 init_data.xml
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas 924961862 Nov 26 17:20 HITS.47556161._001765.pool.root.1
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas      1058 Nov 26 17:20 memory_monitor_summary.json
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas   2355644 Nov 26 17:21 log.47556161._001765.job.log.tgz.1
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas        95 Nov 26 17:21 pilot_heartbeat.json
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas      8608 Nov 26 17:21 heartbeat.json
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:22 boinc_mmap_file
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:22 wrapper_checkpoint.txt
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas       823 Nov 26 17:22 pilotlog.txt
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas   8859250 Nov 26 17:22 log.47556161._001765.job.log.1
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas       353 Nov 26 17:22 output.list
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:22 runtime_log
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas  11233280 Nov 26 17:22 result.tar.gz
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 17:22 runtime_log.err
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas       657 Nov 26 17:22 q2LNDmTWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkXJKDm9Hu2in.diag
[2025-11-26 17:22:02] -rw-r--r--. 1 boincer umatlas     21166 Nov 26 17:22 stderr.txt
[2025-11-26 17:22:02] HITS file was successfully produced:
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas 924961862 Nov 26 17:20 shared/HITS.pool.root.1
[2025-11-26 17:22:02]  *** Contents of shared directory: ***
[2025-11-26 17:22:02] total 1313720
[2025-11-26 17:22:02] -rw-r--r--. 2 boincer umatlas 408431243 Nov 25 22:04 ATLAS.root_0
[2025-11-26 17:22:02] -rw-r--r--. 2 boincer umatlas    590112 Nov 25 22:04 input.tar.gz
[2025-11-26 17:22:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 22:04 start_atlas.sh
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas 924961862 Nov 26 17:20 HITS.pool.root.1
[2025-11-26 17:22:02] -rw-------. 1 boincer umatlas  11233280 Nov 26 17:22 result.tar.gz
17:22:25 (1563310): run_atlas exited; CPU time 312167.324127
17:22:25 (1563310): called boinc_finish(0)

</stderr_txt>
]]>

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