Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:14:25 (29742): wrapper (7.7.26015): starting
21:14:25 (29742): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:14:25] Arguments: --nthreads 8
[2025-11-25 21:14:25] Threads: 8
[2025-11-25 21:14:25] Checking for CVMFS
[2025-11-25 21:14:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:14:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:14:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:14:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:14:25] 2.11.2.0 5524 117071 140232 153304 2 90 15457317 18432001 1885 130560 0 85484890 99.974 4965244 32717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 21:14:25] CVMFS is ok
[2025-11-25 21:14:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:14:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:14:25] Further information can be found at the LHC@home message board.
[2025-11-25 21:14:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:14:25] Checking for apptainer binary...
[2025-11-25 21:14:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:14:25] Running /usr/bin/apptainer --version
[2025-11-25 21:14:25] apptainer version 1.3.2-1.el7
[2025-11-25 21:14:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:14:26] c-206-5.aglt2.org
[2025-11-25 21:14:26] apptainer works
[2025-11-25 21:14:26] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:14:26] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:14:26] Starting ATLAS job with PandaID=6897139583
[2025-11-25 21:14:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:41:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:41:40] 2025-11-26 21:41:23,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,086 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 16:41:40] 2025-11-26 21:41:24,091 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2533.4166666666665
[2025-11-26 16:41:40] 2025-11-26 21:41:24,094 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139583/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,095 | INFO     | extracted standard info from prmon json
[2025-11-26 16:41:40] 2025-11-26 21:41:24,095 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:41:40] 2025-11-26 21:41:24,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:41:40] 2025-11-26 21:41:24,110 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:41:40] 2025-11-26 21:41:24,111 | INFO     | sum of square deviations: 467916539240.5703
[2025-11-26 16:41:40] 2025-11-26 21:41:24,135 | INFO     | sum of deviations: 2385462206612.202
[2025-11-26 16:41:40] 2025-11-26 21:41:24,135 | INFO     | mean x: 1764158256.6390584
[2025-11-26 16:41:40] 2025-11-26 21:41:24,135 | INFO     | mean y: 2868988.258936356
[2025-11-26 16:41:40] 2025-11-26 21:41:24,135 | INFO     | intersect: -8990899119.458475
[2025-11-26 16:41:40] 2025-11-26 21:41:24,136 | INFO     | chi2: 5.698361267310018
[2025-11-26 16:41:40] 2025-11-26 21:41:24,138 | INFO     | sum of square deviations: 461824174151.01935
[2025-11-26 16:41:40] 2025-11-26 21:41:24,167 | INFO     | sum of deviations: 2749364318677.7393
[2025-11-26 16:41:40] 2025-11-26 21:41:24,167 | INFO     | mean x: 1764158104.1418564
[2025-11-26 16:41:40] 2025-11-26 21:41:24,168 | INFO     | mean y: 2878095.149737303
[2025-11-26 16:41:40] 2025-11-26 21:41:24,168 | INFO     | intersect: -10499632634.06927
[2025-11-26 16:41:40] 2025-11-26 21:41:24,170 | INFO     | chi2: 2.759037222649645
[2025-11-26 16:41:40] 2025-11-26 21:41:24,170 | INFO     | current chi2=2.759037222649645 (change=51.581918147634696 %)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,172 | INFO     | sum of square deviations: 455784926336.4493
[2025-11-26 16:41:40] 2025-11-26 21:41:24,217 | INFO     | sum of deviations: 2794899690989.972
[2025-11-26 16:41:40] 2025-11-26 21:41:24,217 | INFO     | mean x: 1764157951.644679
[2025-11-26 16:41:40] 2025-11-26 21:41:24,217 | INFO     | mean y: 2879241.598944591
[2025-11-26 16:41:40] 2025-11-26 21:41:24,217 | INFO     | intersect: -10815039976.44368
[2025-11-26 16:41:40] 2025-11-26 21:41:24,219 | INFO     | chi2: 2.5929971900789
[2025-11-26 16:41:40] 2025-11-26 21:41:24,219 | INFO     | current chi2=2.5929971900789 (change=6.018042497131959 %)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,219 | INFO     | right removable region: 1136
[2025-11-26 16:41:40] 2025-11-26 21:41:24,221 | INFO     | sum of square deviations: 461823727021.0191
[2025-11-26 16:41:40] 2025-11-26 21:41:24,268 | INFO     | sum of deviations: 2073351224023.017
[2025-11-26 16:41:40] 2025-11-26 21:41:24,269 | INFO     | mean x: 1764158409.1418564
[2025-11-26 16:41:40] 2025-11-26 21:41:24,269 | INFO     | mean y: 2876792.394921191
[2025-11-26 16:41:40] 2025-11-26 21:41:24,269 | INFO     | intersect: -7917287943.528861
[2025-11-26 16:41:40] 2025-11-26 21:41:24,271 | INFO     | chi2: 3.531066591721179
[2025-11-26 16:41:40] 2025-11-26 21:41:24,271 | INFO     | current chi2=3.531066591721179 (change=38.03364816516691 %)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,273 | INFO     | sum of square deviations: 455784240819.311
[2025-11-26 16:41:40] 2025-11-26 21:41:24,304 | INFO     | sum of deviations: 1974010054283.7383
[2025-11-26 16:41:40] 2025-11-26 21:41:24,304 | INFO     | mean x: 1764158561.6420405
[2025-11-26 16:41:40] 2025-11-26 21:41:24,304 | INFO     | mean y: 2879300.5620052773
[2025-11-26 16:41:40] 2025-11-26 21:41:24,304 | INFO     | intersect: -7637724358.248347
[2025-11-26 16:41:40] 2025-11-26 21:41:24,305 | INFO     | chi2: 3.4216283682776827
[2025-11-26 16:41:40] 2025-11-26 21:41:24,306 | INFO     | current chi2=3.4216283682776827 (change=3.099296504350321 %)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,306 | INFO     | left removable region: 20
[2025-11-26 16:41:40] 2025-11-26 21:41:24,307 | INFO     | sum of square deviations: 430993504092.0102
[2025-11-26 16:41:40] 2025-11-26 21:41:24,341 | INFO     | sum of deviations: 2229584903664.6655
[2025-11-26 16:41:40] 2025-11-26 21:41:24,341 | INFO     | mean x: 1764158531.1496415
[2025-11-26 16:41:40] 2025-11-26 21:41:24,342 | INFO     | mean y: 2893520.2894265233
[2025-11-26 16:41:40] 2025-11-26 21:41:24,342 | INFO     | intersect: -9123325764.636887
[2025-11-26 16:41:40] 2025-11-26 21:41:24,343 | INFO     | chi2: 0.21221974098750324
[2025-11-26 16:41:40] 2025-11-26 21:41:24,344 | INFO     | current memory leak: 5.17 B/s (using 1116 data points, chi2=0.21)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,345 | INFO     | could have reported an average CPU frequency of 2618 MHz (42 samples)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,345 | INFO     | ..............................
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . Timing measurements:
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . get job = 0 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . initial setup = 2 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . payload setup = 5 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . stage-in = 0 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . payload execution = 69969 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,346 | INFO     | . stage-out = 4 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,347 | INFO     | . log creation = 0 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,347 | INFO     | ..............................
[2025-11-26 16:41:40] 2025-11-26 21:41:24,769 | INFO     | time since job start (70007s) is within the limit (172800.0s)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,943 | INFO     | 
[2025-11-26 16:41:40] 2025-11-26 21:41:24,944 | INFO     | job summary report
[2025-11-26 16:41:40] 2025-11-26 21:41:24,944 | INFO     | --------------------------------------------------
[2025-11-26 16:41:40] 2025-11-26 21:41:24,944 | INFO     | PanDA job id: 6897139583
[2025-11-26 16:41:40] 2025-11-26 21:41:24,944 | INFO     | task id: 47556161
[2025-11-26 16:41:40] 2025-11-26 21:41:24,944 | INFO     | errors: (none)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:41:40] 2025-11-26 21:41:24,945 | INFO     | pilot state: finished 
[2025-11-26 16:41:40] 2025-11-26 21:41:24,945 | INFO     | transexitcode: 0
[2025-11-26 16:41:40] 2025-11-26 21:41:24,945 | INFO     | exeerrorcode: 0
[2025-11-26 16:41:40] 2025-11-26 21:41:24,945 | INFO     | exeerrordiag: 
[2025-11-26 16:41:40] 2025-11-26 21:41:24,945 | INFO     | exitcode: 0
[2025-11-26 16:41:40] 2025-11-26 21:41:24,946 | INFO     | exitmsg: OK
[2025-11-26 16:41:40] 2025-11-26 21:41:24,946 | INFO     | cpuconsumptiontime: 546269 s
[2025-11-26 16:41:40] 2025-11-26 21:41:24,946 | INFO     | nevents: 1000
[2025-11-26 16:41:40] 2025-11-26 21:41:24,946 | INFO     | neventsw: 0
[2025-11-26 16:41:40] 2025-11-26 21:41:24,946 | INFO     | pid: 7576
[2025-11-26 16:41:40] 2025-11-26 21:41:24,946 | INFO     | pgrp: 7576
[2025-11-26 16:41:40] 2025-11-26 21:41:24,947 | INFO     | corecount: 8
[2025-11-26 16:41:40] 2025-11-26 21:41:24,947 | INFO     | event service: False
[2025-11-26 16:41:40] 2025-11-26 21:41:24,947 | INFO     | sizes: {0: 2284265, 4: 2284527, 11: 2284555, 69978: 2341043, 69982: 2350037, 69986: 2350093, 69992: 2350467}
[2025-11-26 16:41:40] 2025-11-26 21:41:24,947 | INFO     | --------------------------------------------------
[2025-11-26 16:41:40] 2025-11-26 21:41:24,947 | INFO     | 
[2025-11-26 16:41:40] 2025-11-26 21:41:24,947 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 16:41:40] 2025-11-26 21:41:24,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,970 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:41:40] 2025-11-26 21:41:24,971 | INFO     | job 6897139583 has completed (purged errors)
[2025-11-26 16:41:40] 2025-11-26 21:41:24,971 | INFO     | overall cleanup function is called
[2025-11-26 16:41:40] 2025-11-26 21:41:25,973 | INFO     | PID=982 has CPU usage=18.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 16:41:40] 2025-11-26 21:41:25,973 | INFO     | .. there are 3 such processes running
[2025-11-26 16:41:40] 2025-11-26 21:41:25,988 | INFO     | --- collectZombieJob: --- 10, [7576]
[2025-11-26 16:41:40] 2025-11-26 21:41:25,988 | INFO     | zombie collector waiting for pid 7576
[2025-11-26 16:41:40] 2025-11-26 21:41:25,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:41:40] 2025-11-26 21:41:25,988 | INFO     | collected zombie processes
[2025-11-26 16:41:40] 2025-11-26 21:41:25,989 | INFO     | will attempt to kill all subprocesses of pid=7576
[2025-11-26 16:41:40] 2025-11-26 21:41:26,150 | INFO     | process IDs to be killed: [7576] (in reverse order)
[2025-11-26 16:41:40] 2025-11-26 21:41:26,210 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:41:40] 2025-11-26 21:41:26,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:41:40] 2025-11-26 21:41:26,216 | INFO     | did not find any defunct processes belonging to 7576
[2025-11-26 16:41:40] 2025-11-26 21:41:26,221 | INFO     | did not find any defunct processes belonging to 7576
[2025-11-26 16:41:40] 2025-11-26 21:41:26,223 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:41:40] 2025-11-26 21:41:26,223 | INFO     | ready for new job
[2025-11-26 16:41:40] 2025-11-26 21:41:26,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:41:40] 2025-11-26 21:41:26,229 | INFO     | ***************************************
[2025-11-26 16:41:40] 2025-11-26 21:41:26,229 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:41:40] 2025-11-26 21:41:26,229 | INFO     | ***************************************
[2025-11-26 16:41:40] 2025-11-26 21:41:26,229 | INFO     | 
[2025-11-26 16:41:40] 2025-11-26 21:41:26,230 | INFO     | architecture information:
[2025-11-26 16:41:40] 2025-11-26 21:41:26,231 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:41:40] 2025-11-26 21:41:26,243 | INFO     | cat /etc/os-release:
[2025-11-26 16:41:40] NAME="CentOS Linux"
[2025-11-26 16:41:40] VERSION="7 (Core)"
[2025-11-26 16:41:40] ID="centos"
[2025-11-26 16:41:40] ID_LIKE="rhel fedora"
[2025-11-26 16:41:40] VERSION_ID="7"
[2025-11-26 16:41:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:41:40] ANSI_COLOR="0;31"
[2025-11-26 16:41:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:41:40] HOME_URL="https://www.centos.org/"
[2025-11-26 16:41:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:41:40] 
[2025-11-26 16:41:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:41:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:41:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:41:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:41:40] 
[2025-11-26 16:41:40] 2025-11-26 21:41:26,243 | INFO     | ***************************************
[2025-11-26 16:41:40] 2025-11-26 21:41:26,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 16:41:40] 2025-11-26 21:41:26,765 | INFO     | sufficient remaining disk space (25491931136 B)
[2025-11-26 16:41:40] 2025-11-26 21:41:26,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:41:40] 2025-11-26 21:41:26,766 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:41:40] 2025-11-26 21:41:26,766 | INFO     | update_server=False
[2025-11-26 16:41:40] 2025-11-26 21:41:26,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:41:40] 2025-11-26 21:41:26,766 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 16:41:40] 2025-11-26 21:41:26,767 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:41:40] 2025-11-26 21:41:26,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:41:40] 2025-11-26 21:41:26,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:41:40] 2025-11-26 21:41:26,926 | INFO     | all job control threads have been joined
[2025-11-26 16:41:40] 2025-11-26 21:41:27,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:41:40] 2025-11-26 21:41:27,460 | INFO     | aborting loop
[2025-11-26 16:41:40] 2025-11-26 21:41:27,518 | INFO     | all payload control threads have been joined
[2025-11-26 16:41:40] 2025-11-26 21:41:27,561 | INFO     | all data control threads have been joined
[2025-11-26 16:41:40] 2025-11-26 21:41:27,772 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:27,812 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:27,873 | INFO     | [job] validate thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:27,877 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:27,931 | INFO     | [job] control thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:27,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:41:40] 2025-11-26 21:41:28,265 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:28,465 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:28,525 | INFO     | [payload] control thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:28,566 | INFO     | [data] control thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:28,969 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:29,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:29,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:41:40] 2025-11-26 21:41:29,035 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:29,366 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:29,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:41:40] 2025-11-26 21:41:29,999 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:30,498 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:33,035 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:41:40] 2025-11-26 21:41:33,526 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:41:40] 2025-11-26 21:41:35,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213493450560)>', '<ExcThread(monitor, started 140212747360000)>']
[2025-11-26 16:41:40] 2025-11-26 21:41:35,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:41:40] 2025-11-26 21:41:35,810 | INFO     | [monitor] control thread has ended
[2025-11-26 16:41:40] 2025-11-26 21:41:40,182 | INFO     | all workflow threads have been joined
[2025-11-26 16:41:40] 2025-11-26 21:41:40,182 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:41:40] 2025-11-26 21:41:40,182 | INFO     | traces error code: 0
[2025-11-26 16:41:40] 2025-11-26 21:41:40,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:41:40] 2025-11-26 21:41:40,305 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:41:40] 2025-11-26 21:41:40,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:41:40] 2025-11-26 21:41:40,310 [wrapper] pilotpid: 982
[2025-11-26 16:41:40] 2025-11-26 21:41:40,313 [wrapper] Pilot exit status: 0
[2025-11-26 16:41:40] 2025-11-26 21:41:40,322 [wrapper] pandaids: 6897139583
[2025-11-26 16:41:40] 2025-11-26 21:41:40,362 [wrapper] cleanup supervisor_pilot  7208 983
[2025-11-26 16:41:40] 2025-11-26 21:41:40,365 [wrapper] Test setup, not cleaning
[2025-11-26 16:41:40] 2025-11-26 21:41:40,368 [wrapper] apfmon messages muted
[2025-11-26 16:41:40] 2025-11-26 21:41:40,370 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:41:40] 2025-11-26 21:41:40,372 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:41:40]  *** Error codes and diagnostics ***
[2025-11-26 16:41:40]     "exeErrorCode": 0,
[2025-11-26 16:41:40]     "exeErrorDiag": "",
[2025-11-26 16:41:40]     "pilotErrorCode": 0,
[2025-11-26 16:41:40]     "pilotErrorDiag": "",
[2025-11-26 16:41:40]  *** Listing of results directory ***
[2025-11-26 16:41:40] total 1336740
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 16:41:40] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas       100 Nov 25 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:41:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 21:14 run_atlas
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas       105 Nov 25 21:14 job.xml
[2025-11-26 16:41:40] -rw-r--r-- 2 boincer umatlas 409576585 Nov 25 21:14 EVNT.47483658._002187.pool.root.1
[2025-11-26 16:41:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 21:14 start_atlas.sh
[2025-11-26 16:41:40] drwxrwx--x 2 boincer umatlas      4096 Nov 25 21:14 shared
[2025-11-26 16:41:40] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 21:14 input.tar.gz
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas         0 Nov 25 21:14 boinc_lockfile
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 21:14 pandaJob.out
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas        57 Nov 25 21:14 setup.sh.local
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas    991877 Nov 25 21:14 agis_schedconf.cvmfs.json
[2025-11-26 16:41:40] drwx------ 5 boincer umatlas      4096 Nov 25 21:14 pilot3
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas       533 Nov 26 16:31 boinc_task_state.xml
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas      5952 Nov 26 16:37 init_data.xml
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas 931320147 Nov 26 16:40 HITS.47556161._001706.pool.root.1
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas        95 Nov 26 16:40 pilot_heartbeat.json
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas      1067 Nov 26 16:41 memory_monitor_summary.json
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas   1516240 Nov 26 16:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas   2316246 Nov 26 16:41 log.47556161._001706.job.log.tgz.1
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas      8673 Nov 26 16:41 heartbeat.json
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 16:41 boinc_mmap_file
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas        29 Nov 26 16:41 wrapper_checkpoint.txt
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas      4552 Nov 26 16:41 pilotlog.txt
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas   9686251 Nov 26 16:41 log.47556161._001706.job.log.1
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas       353 Nov 26 16:41 output.list
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas       620 Nov 26 16:41 runtime_log
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas  12021760 Nov 26 16:41 result.tar.gz
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas       667 Nov 26 16:41 RyJKDmTWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtWJKDm7O9N4n.diag
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas      9338 Nov 26 16:41 runtime_log.err
[2025-11-26 16:41:40] -rw-r--r-- 1 boincer umatlas     21300 Nov 26 16:41 stderr.txt
[2025-11-26 16:41:40] HITS file was successfully produced:
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas 931320147 Nov 26 16:40 shared/HITS.pool.root.1
[2025-11-26 16:41:40]  *** Contents of shared directory: ***
[2025-11-26 16:41:40] total 1321816
[2025-11-26 16:41:40] -rw-r--r-- 2 boincer umatlas 409576585 Nov 25 21:14 ATLAS.root_0
[2025-11-26 16:41:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 21:14 start_atlas.sh
[2025-11-26 16:41:40] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 21:14 input.tar.gz
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas 931320147 Nov 26 16:40 HITS.pool.root.1
[2025-11-26 16:41:40] -rw------- 1 boincer umatlas  12021760 Nov 26 16:41 result.tar.gz
16:41:41 (29742): run_atlas exited; CPU time 545550.067645
16:41:41 (29742): called boinc_finish(0)

</stderr_txt>
]]>

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