Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:56 (1645118): wrapper (7.7.26015): starting
21:30:56 (1645118): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:30:56] Arguments: --nthreads 8
[2025-11-25 21:30:56] Threads: 8
[2025-11-25 21:30:56] Checking for CVMFS
[2025-11-25 21:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:30:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:30:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:30:58] 2.13.3.0 7314 29392 232372 153305 2 430 23705211 40960000 56270 16776704 0 429833611 99.755 265141489 50942 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 21:30:58] CVMFS is ok
[2025-11-25 21:30:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:30:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:30:58] Further information can be found at the LHC@home message board.
[2025-11-25 21:30:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:30:58] Checking for apptainer binary...
[2025-11-25 21:30:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:30:58] Running /usr/bin/apptainer --version
[2025-11-25 21:30:58] apptainer version 1.4.4-1.el9
[2025-11-25 21:30:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:30:58] c8-16-1.aglt2.org
[2025-11-25 21:30:58] apptainer works
[2025-11-25 21:30:58] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:30:58] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:30:59] Starting ATLAS job with PandaID=6896713751
[2025-11-25 21:30:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:02:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:02:27] 2025-11-26 14:01:42,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:02:27] 2025-11-26 14:01:43,031 | INFO     | PID=1657427 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 09:02:27] 2025-11-26 14:01:43,031 | INFO     | .. there are 86 such processes running
[2025-11-26 09:02:27] 2025-11-26 14:01:44,033 | INFO     | time since job start (41387s) is within the limit (172800.0s)
[2025-11-26 09:02:27] 2025-11-26 14:01:44,557 | INFO     | monitor loop #2200: job 0:6896713751 is in state 'finished'
[2025-11-26 09:02:27] 2025-11-26 14:01:44,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:02:27] 2025-11-26 14:01:46,043 | INFO     | time since job start (41389s) is within the limit (172800.0s)
[2025-11-26 09:02:27] 2025-11-26 14:01:47,065 | INFO     | monitor loop #2201: job 0:6896713751 is in state 'finished'
[2025-11-26 09:02:27] 2025-11-26 14:01:47,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:02:27] 2025-11-26 14:01:48,056 | INFO     | time since job start (41391s) is within the limit (172800.0s)
[2025-11-26 09:02:27] 2025-11-26 14:01:49,609 | INFO     | monitor loop #2202: job 0:6896713751 is in state 'finished'
[2025-11-26 09:02:27] 2025-11-26 14:01:49,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:02:27] 2025-11-26 14:01:50,063 | INFO     | time since job start (41393s) is within the limit (172800.0s)
[2025-11-26 09:02:27] 2025-11-26 14:01:52,070 | INFO     | time since job start (41395s) is within the limit (172800.0s)
[2025-11-26 09:02:27] 2025-11-26 14:01:52,115 | INFO     | monitor loop #2203: job 0:6896713751 is in state 'finished'
[2025-11-26 09:02:27] 2025-11-26 14:01:52,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 09:02:27] 2025-11-26 14:01:52,693 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 09:02:27] 2025-11-26 14:01:52,717 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9868749999996
[2025-11-26 09:02:27] 2025-11-26 14:01:52,806 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896713751/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:02:27] 2025-11-26 14:01:52,807 | INFO     | extracted standard info from prmon json
[2025-11-26 09:02:27] 2025-11-26 14:01:52,807 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:02:27] 2025-11-26 14:01:52,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:02:27] 2025-11-26 14:01:52,855 | INFO     | fitting pss+swap vs Time
[2025-11-26 09:02:27] 2025-11-26 14:01:52,856 | INFO     | sum of square deviations: 95793839084.0828
[2025-11-26 09:02:27] 2025-11-26 14:01:52,884 | INFO     | sum of deviations: 760547429255.1787
[2025-11-26 09:02:27] 2025-11-26 14:01:52,884 | INFO     | mean x: 1764145065.0532544
[2025-11-26 09:02:27] 2025-11-26 14:01:52,884 | INFO     | mean y: 2829645.078402367
[2025-11-26 09:02:27] 2025-11-26 14:01:52,904 | INFO     | intersect: -14003457261.136671
[2025-11-26 09:02:27] 2025-11-26 14:01:52,905 | INFO     | chi2: 22.655923534158102
[2025-11-26 09:02:27] 2025-11-26 14:01:52,905 | INFO     | sum of square deviations: 93684333716.92996
[2025-11-26 09:02:27] 2025-11-26 14:01:52,954 | INFO     | sum of deviations: 994461644821.1381
[2025-11-26 09:02:27] 2025-11-26 14:01:52,954 | INFO     | mean x: 1764144912.5648286
[2025-11-26 09:02:27] 2025-11-26 14:01:52,954 | INFO     | mean y: 2846557.353204173
[2025-11-26 09:02:27] 2025-11-26 14:01:52,954 | INFO     | intersect: -18723597682.010845
[2025-11-26 09:02:27] 2025-11-26 14:01:52,955 | INFO     | chi2: 19.135275396470846
[2025-11-26 09:02:27] 2025-11-26 14:01:52,955 | INFO     | current chi2=19.135275396470846 (change=15.539636388599263 %)
[2025-11-26 09:02:27] 2025-11-26 14:01:52,955 | INFO     | right removable region: 670
[2025-11-26 09:02:27] 2025-11-26 14:01:52,955 | INFO     | sum of square deviations: 93683693216.93004
[2025-11-26 09:02:27] 2025-11-26 14:01:52,986 | INFO     | sum of deviations: 475944835208.12067
[2025-11-26 09:02:27] 2025-11-26 14:01:53,004 | INFO     | mean x: 1764145217.5648286
[2025-11-26 09:02:27] 2025-11-26 14:01:53,004 | INFO     | mean y: 2850212.962742176
[2025-11-26 09:02:27] 2025-11-26 14:01:53,004 | INFO     | intersect: -8959603934.877705
[2025-11-26 09:02:27] 2025-11-26 14:01:53,005 | INFO     | chi2: 17.688863712946088
[2025-11-26 09:02:27] 2025-11-26 14:01:53,005 | INFO     | current chi2=17.688863712946088 (change=21.923890296165723 %)
[2025-11-26 09:02:27] 2025-11-26 14:01:53,005 | INFO     | left removable region: 10
[2025-11-26 09:02:27] 2025-11-26 14:01:53,005 | INFO     | sum of square deviations: 89151672264.54498
[2025-11-26 09:02:27] 2025-11-26 14:01:53,033 | INFO     | sum of deviations: 509521913627.00037
[2025-11-26 09:02:27] 2025-11-26 14:01:53,033 | INFO     | mean x: 1764145187.090909
[2025-11-26 09:02:27] 2025-11-26 14:01:53,033 | INFO     | mean y: 2890680.3333333335
[2025-11-26 09:02:27] 2025-11-26 14:01:53,033 | INFO     | intersect: -10079596936.670092
[2025-11-26 09:02:27] 2025-11-26 14:01:53,033 | INFO     | chi2: 9.209196324773789
[2025-11-26 09:02:27] 2025-11-26 14:01:53,033 | INFO     | current memory leak: 5.72 B/s (using 660 data points, chi2=9.21)
[2025-11-26 09:02:27] 2025-11-26 14:01:53,056 | INFO     | could have reported an average CPU frequency of 3799 MHz (26 samples)
[2025-11-26 09:02:27] 2025-11-26 14:01:53,056 | INFO     | ..............................
[2025-11-26 09:02:27] 2025-11-26 14:01:53,056 | INFO     | . Timing measurements:
[2025-11-26 09:02:27] 2025-11-26 14:01:53,056 | INFO     | . get job = 0 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,056 | INFO     | . initial setup = 5 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,057 | INFO     | . payload setup = 55 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,057 | INFO     | . stage-in = 0 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,057 | INFO     | . payload execution = 41244 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,057 | INFO     | . stage-out = 4 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,057 | INFO     | . log creation = 0 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,057 | INFO     | ..............................
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | 
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | job summary report
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | --------------------------------------------------
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | PanDA job id: 6896713751
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | task id: 47556161
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | errors: (none)
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:02:27] 2025-11-26 14:01:53,278 | INFO     | pilot state: finished 
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | transexitcode: 0
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | exeerrorcode: 0
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | exeerrordiag: 
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | exitcode: 0
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | exitmsg: OK
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | cpuconsumptiontime: 137342 s
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | nevents: 1000
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | neventsw: 0
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | pid: 1678389
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | pgrp: 1678389
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | corecount: 8
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | event service: False
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | sizes: {0: 2284085, 1: 2284284, 12: 2284284, 23: 2284312, 28: 2284602, 34: 2284630, 41304: 2328157, 41305: 2328156, 41310: 2337262, 41328: 2337452}
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | --------------------------------------------------
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | 
[2025-11-26 09:02:27] 2025-11-26 14:01:53,279 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 09:02:27] 2025-11-26 14:01:53,366 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,366 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,366 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | job 6896713751 has completed (purged errors)
[2025-11-26 09:02:27] 2025-11-26 14:01:53,367 | INFO     | overall cleanup function is called
[2025-11-26 09:02:27] 2025-11-26 14:01:54,399 | INFO     | --- collectZombieJob: --- 10, [1678389]
[2025-11-26 09:02:27] 2025-11-26 14:01:54,399 | INFO     | zombie collector waiting for pid 1678389
[2025-11-26 09:02:27] 2025-11-26 14:01:54,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:02:27] 2025-11-26 14:01:54,399 | INFO     | collected zombie processes
[2025-11-26 09:02:27] 2025-11-26 14:01:54,399 | INFO     | will attempt to kill all subprocesses of pid=1678389
[2025-11-26 09:02:27] 2025-11-26 14:01:55,014 [wrapper] supervise_pilot (15 min periods counter: 47)
[2025-11-26 09:02:27] 2025-11-26 14:01:56,362 | INFO     | process IDs to be killed: [1678389] (in reverse order)
[2025-11-26 09:02:27] 2025-11-26 14:01:56,657 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:02:27] 2025-11-26 14:01:56,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:02:27] 2025-11-26 14:01:56,714 | INFO     | did not find any defunct processes belonging to 1678389
[2025-11-26 09:02:27] 2025-11-26 14:01:56,921 | INFO     | did not find any defunct processes belonging to 1678389
[2025-11-26 09:02:27] 2025-11-26 14:01:56,945 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:02:27] 2025-11-26 14:01:56,945 | INFO     | ready for new job
[2025-11-26 09:02:27] 2025-11-26 14:01:56,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:02:27] 2025-11-26 14:01:56,948 | INFO     | ***************************************
[2025-11-26 09:02:27] 2025-11-26 14:01:56,948 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:02:27] 2025-11-26 14:01:56,948 | INFO     | ***************************************
[2025-11-26 09:02:27] 2025-11-26 14:01:56,948 | INFO     | 
[2025-11-26 09:02:27] 2025-11-26 14:01:56,997 | INFO     | architecture information:
[2025-11-26 09:02:27] 2025-11-26 14:01:57,059 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:02:27] 2025-11-26 14:01:57,131 | INFO     | cat /etc/os-release:
[2025-11-26 09:02:27] NAME="CentOS Linux"
[2025-11-26 09:02:27] VERSION="7 (Core)"
[2025-11-26 09:02:27] ID="centos"
[2025-11-26 09:02:27] ID_LIKE="rhel fedora"
[2025-11-26 09:02:27] VERSION_ID="7"
[2025-11-26 09:02:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:02:27] ANSI_COLOR="0;31"
[2025-11-26 09:02:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:02:27] HOME_URL="https://www.centos.org/"
[2025-11-26 09:02:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:02:27] 
[2025-11-26 09:02:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:02:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:02:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:02:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:02:27] 
[2025-11-26 09:02:27] 2025-11-26 14:01:57,131 | INFO     | ***************************************
[2025-11-26 09:02:27] 2025-11-26 14:01:57,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 09:02:27] 2025-11-26 14:01:57,668 | INFO     | sufficient remaining disk space (159416057856 B)
[2025-11-26 09:02:27] 2025-11-26 14:01:57,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:02:27] 2025-11-26 14:01:57,668 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:02:27] 2025-11-26 14:01:57,668 | INFO     | update_server=False
[2025-11-26 09:02:27] 2025-11-26 14:01:57,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:02:27] 2025-11-26 14:01:57,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:02:27] 2025-11-26 14:01:57,974 | INFO     | all data control threads have been joined
[2025-11-26 09:02:27] 2025-11-26 14:01:58,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:02:27] 2025-11-26 14:01:58,166 | INFO     | aborting loop
[2025-11-26 09:02:27] 2025-11-26 14:01:58,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:02:27] 2025-11-26 14:01:58,369 | INFO     | all payload control threads have been joined
[2025-11-26 09:02:27] 2025-11-26 14:01:58,637 | INFO     | all job control threads have been joined
[2025-11-26 09:02:27] 2025-11-26 14:01:58,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:58,692 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:58,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:02:27] 2025-11-26 14:01:58,905 | INFO     | [job] validate thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:58,983 | INFO     | [data] control thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,171 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,305 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,375 | INFO     | [payload] control thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,642 | INFO     | [job] control thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,675 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,770 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,851 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:01:59,861 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:02:00,076 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:02:00,161 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:02:00,161 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:02:02,812 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:02:27] 2025-11-26 14:02:11,740 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:02:27] 2025-11-26 14:02:11,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441170425664)>', '<ExcThread(monitor, started 140440598738688)>']
[2025-11-26 09:02:27] 2025-11-26 14:02:16,800 | INFO     | all workflow threads have been joined
[2025-11-26 09:02:27] 2025-11-26 14:02:16,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:02:27] 2025-11-26 14:02:16,803 | INFO     | traces error code: 0
[2025-11-26 09:02:27] 2025-11-26 14:02:16,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:02:27] 2025-11-26 14:02:26,360 | INFO     | PID=1657427 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 09:02:27] 2025-11-26 14:02:26,360 | INFO     | .. there are 86 such processes running
[2025-11-26 09:02:27] 2025-11-26 14:02:26,360 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:02:27] 2025-11-26 14:02:26,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:02:27] 2025-11-26 14:02:26,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:02:27] 2025-11-26 14:02:26,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:02:27] 2025-11-26 14:02:26,361 | INFO     | [monitor] control thread has ended
[2025-11-26 09:02:27] 2025-11-26 14:02:26,552 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:02:27] 2025-11-26 14:02:26,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:02:27] 2025-11-26 14:02:26,598 [wrapper] pilotpid: 1657427
[2025-11-26 09:02:27] 2025-11-26 14:02:26,640 [wrapper] Pilot exit status: 0
[2025-11-26 09:02:27] 2025-11-26 14:02:26,730 [wrapper] pandaids: 6896713751
[2025-11-26 09:02:27] 2025-11-26 14:02:27,044 [wrapper] cleanup supervisor_pilot 3480466 1657428
[2025-11-26 09:02:27] 2025-11-26 14:02:27,074 [wrapper] Test setup, not cleaning
[2025-11-26 09:02:27] 2025-11-26 14:02:27,101 [wrapper] apfmon messages muted
[2025-11-26 09:02:27] 2025-11-26 14:02:27,144 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:02:27] 2025-11-26 14:02:27,197 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:02:27]  *** Error codes and diagnostics ***
[2025-11-26 09:02:27]     "exeErrorCode": 0,
[2025-11-26 09:02:27]     "exeErrorDiag": "",
[2025-11-26 09:02:27]     "pilotErrorCode": 0,
[2025-11-26 09:02:27]     "pilotErrorDiag": "",
[2025-11-26 09:02:27]  *** Listing of results directory ***
[2025-11-26 09:02:27] total 1315732
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:41 queuedata.json
[2025-11-26 09:02:27] -rwx------. 1 boincer umatlas     36292 Nov 25 00:42 runpilot2-wrapper.sh
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas       100 Nov 25 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:02:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 21:30 run_atlas
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas       105 Nov 25 21:30 job.xml
[2025-11-26 09:02:27] -rw-r--r--. 2 boincer umatlas 411729445 Nov 25 21:30 EVNT.47483658._002111.pool.root.1
[2025-11-26 09:02:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:30 start_atlas.sh
[2025-11-26 09:02:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 21:30 shared
[2025-11-26 09:02:27] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 21:30 input.tar.gz
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas         0 Nov 25 21:30 boinc_lockfile
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas      2781 Nov 25 21:30 pandaJob.out
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas        57 Nov 25 21:30 setup.sh.local
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas    991877 Nov 25 21:31 agis_schedconf.cvmfs.json
[2025-11-26 09:02:27] drwx------. 5 boincer umatlas      4096 Nov 25 21:31 pilot3
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:43 boinc_task_state.xml
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas      7174 Nov 26 08:55 init_data.xml
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas 918224296 Nov 26 09:00 HITS.47556161._000941.pool.root.1
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas      1053 Nov 26 09:01 memory_monitor_summary.json
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas   1516240 Nov 26 09:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas   1845421 Nov 26 09:01 log.47556161._000941.job.log.tgz.1
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas      8579 Nov 26 09:01 heartbeat.json
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 09:02 boinc_mmap_file
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas        29 Nov 26 09:02 wrapper_checkpoint.txt
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas       823 Nov 26 09:02 pilotlog.txt
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas        95 Nov 26 09:02 pilot_heartbeat.json
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas   4875718 Nov 26 09:02 log.47556161._000941.job.log.1
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas       353 Nov 26 09:02 output.list
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas       620 Nov 26 09:02 runtime_log
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas   6737920 Nov 26 09:02 result.tar.gz
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 09:02 runtime_log.err
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas       659 Nov 26 09:02 EBGKDmnz0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNBMKDm3pcTNn.diag
[2025-11-26 09:02:27] -rw-r--r--. 1 boincer umatlas     21862 Nov 26 09:02 stderr.txt
[2025-11-26 09:02:27] HITS file was successfully produced:
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas 918224296 Nov 26 09:00 shared/HITS.pool.root.1
[2025-11-26 09:02:27]  *** Contents of shared directory: ***
[2025-11-26 09:02:27] total 1305968
[2025-11-26 09:02:27] -rw-r--r--. 2 boincer umatlas 411729445 Nov 25 21:30 ATLAS.root_0
[2025-11-26 09:02:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 21:30 start_atlas.sh
[2025-11-26 09:02:27] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 21:30 input.tar.gz
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas 918224296 Nov 26 09:00 HITS.pool.root.1
[2025-11-26 09:02:27] -rw-------. 1 boincer umatlas   6737920 Nov 26 09:02 result.tar.gz
09:02:28 (1645118): run_atlas exited; CPU time 138033.324531
09:02:28 (1645118): called boinc_finish(0)

</stderr_txt>
]]>

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