Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:11:42 (20729): wrapper (7.7.26015): starting
21:11:42 (20729): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 21:11:42] Arguments: --nthreads 8
[2025-11-25 21:11:42] Threads: 8
[2025-11-25 21:11:42] Checking for CVMFS
[2025-11-25 21:11:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 21:11:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 21:11:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 21:11:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 21:11:42] 2.11.2.0 3643 65267 123456 153304 3 82 12518658 18432000 1885 130560 0 38222336 99.974 2627935 27198 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 21:11:42] CVMFS is ok
[2025-11-25 21:11:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 21:11:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 21:11:42] Further information can be found at the LHC@home message board.
[2025-11-25 21:11:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 21:11:42] Checking for apptainer binary...
[2025-11-25 21:11:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 21:11:42] Running /usr/bin/apptainer --version
[2025-11-25 21:11:42] apptainer version 1.3.2-1.el7
[2025-11-25 21:11:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 21:11:43] c-206-15.aglt2.org
[2025-11-25 21:11:43] apptainer works
[2025-11-25 21:11:43] Set ATHENA_PROC_NUMBER=8
[2025-11-25 21:11:43] Set ATHENA_CORE_NUMBER=8
[2025-11-25 21:11:43] Starting ATLAS job with PandaID=6893859993
[2025-11-25 21:11:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:35:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:35:56] 2025-11-26 21:35:00,012 | INFO     | time since job start (69786s) is within the limit (172800.0s)
[2025-11-26 16:35:56] 2025-11-26 21:35:00,184 | INFO     | monitor loop #4978: job 0:6893859993 is in state 'finished'
[2025-11-26 16:35:56] 2025-11-26 21:35:00,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,283 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 16:35:56] 2025-11-26 21:35:01,287 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.2083333333335
[2025-11-26 16:35:56] 2025-11-26 21:35:01,289 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893859993/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,290 | INFO     | extracted standard info from prmon json
[2025-11-26 16:35:56] 2025-11-26 21:35:01,290 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:35:56] 2025-11-26 21:35:01,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:35:56] 2025-11-26 21:35:01,305 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:35:56] 2025-11-26 21:35:01,306 | INFO     | sum of square deviations: 464253642350.8524
[2025-11-26 16:35:56] 2025-11-26 21:35:01,332 | INFO     | sum of deviations: 2230550416627.2007
[2025-11-26 16:35:56] 2025-11-26 21:35:01,332 | INFO     | mean x: 1764158002.1293707
[2025-11-26 16:35:56] 2025-11-26 21:35:01,332 | INFO     | mean y: 2868272.8094405592
[2025-11-26 16:35:56] 2025-11-26 21:35:01,332 | INFO     | intersect: -8473195257.289974
[2025-11-26 16:35:56] 2025-11-26 21:35:01,333 | INFO     | chi2: 5.864491153484496
[2025-11-26 16:35:56] 2025-11-26 21:35:01,334 | INFO     | sum of square deviations: 458193171568.86053
[2025-11-26 16:35:56] 2025-11-26 21:35:01,358 | INFO     | sum of deviations: 2593786096602.702
[2025-11-26 16:35:56] 2025-11-26 21:35:01,358 | INFO     | mean x: 1764157849.6321335
[2025-11-26 16:35:56] 2025-11-26 21:35:01,358 | INFO     | mean y: 2877408.9754170324
[2025-11-26 16:35:56] 2025-11-26 21:35:01,358 | INFO     | intersect: -9983845193.023592
[2025-11-26 16:35:56] 2025-11-26 21:35:01,359 | INFO     | chi2: 2.9100954515365407
[2025-11-26 16:35:56] 2025-11-26 21:35:01,359 | INFO     | current chi2=2.9100954515365407 (change=50.37769901302599 %)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,360 | INFO     | sum of square deviations: 452185678524.3568
[2025-11-26 16:35:56] 2025-11-26 21:35:01,383 | INFO     | sum of deviations: 2715164588801.9106
[2025-11-26 16:35:56] 2025-11-26 21:35:01,383 | INFO     | mean x: 1764157697.1349206
[2025-11-26 16:35:56] 2025-11-26 21:35:01,384 | INFO     | mean y: 2880487.863315697
[2025-11-26 16:35:56] 2025-11-26 21:35:01,384 | INFO     | intersect: -10590065586.754684
[2025-11-26 16:35:56] 2025-11-26 21:35:01,385 | INFO     | chi2: 2.458817354042591
[2025-11-26 16:35:56] 2025-11-26 21:35:01,385 | INFO     | current chi2=2.458817354042591 (change=15.50732974259223 %)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,385 | INFO     | right removable region: 1133
[2025-11-26 16:35:56] 2025-11-26 21:35:01,386 | INFO     | sum of square deviations: 458192732368.8609
[2025-11-26 16:35:56] 2025-11-26 21:35:01,409 | INFO     | sum of deviations: 1925586105442.5713
[2025-11-26 16:35:56] 2025-11-26 21:35:01,409 | INFO     | mean x: 1764158154.6321335
[2025-11-26 16:35:56] 2025-11-26 21:35:01,410 | INFO     | mean y: 2875938.3450395083
[2025-11-26 16:35:56] 2025-11-26 21:35:01,410 | INFO     | intersect: -7411118632.891657
[2025-11-26 16:35:56] 2025-11-26 21:35:01,411 | INFO     | chi2: 3.7807833220341385
[2025-11-26 16:35:56] 2025-11-26 21:35:01,411 | INFO     | current chi2=3.7807833220341385 (change=35.53092292094744 %)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,412 | INFO     | sum of square deviations: 452184938838.89355
[2025-11-26 16:35:56] 2025-11-26 21:35:01,435 | INFO     | sum of deviations: 1829220945114.1665
[2025-11-26 16:35:56] 2025-11-26 21:35:01,435 | INFO     | mean x: 1764158307.133157
[2025-11-26 16:35:56] 2025-11-26 21:35:01,435 | INFO     | mean y: 2878384.1710758377
[2025-11-26 16:35:56] 2025-11-26 21:35:01,435 | INFO     | intersect: -7133660338.660787
[2025-11-26 16:35:56] 2025-11-26 21:35:01,436 | INFO     | chi2: 3.675555511619767
[2025-11-26 16:35:56] 2025-11-26 21:35:01,436 | INFO     | current chi2=3.675555511619767 (change=2.7832277454545222 %)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,437 | INFO     | left removable region: 20
[2025-11-26 16:35:56] 2025-11-26 21:35:01,437 | INFO     | sum of square deviations: 427526337902.8036
[2025-11-26 16:35:56] 2025-11-26 21:35:01,462 | INFO     | sum of deviations: 2168949779535.8018
[2025-11-26 16:35:56] 2025-11-26 21:35:01,462 | INFO     | mean x: 1764158276.638814
[2025-11-26 16:35:56] 2025-11-26 21:35:01,463 | INFO     | mean y: 2894350.939802336
[2025-11-26 16:35:56] 2025-11-26 21:35:01,463 | INFO     | intersect: -8947128994.877844
[2025-11-26 16:35:56] 2025-11-26 21:35:01,464 | INFO     | chi2: 0.1835867230322808
[2025-11-26 16:35:56] 2025-11-26 21:35:01,465 | INFO     | current memory leak: 5.07 B/s (using 1113 data points, chi2=0.18)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,466 | INFO     | could have reported an average CPU frequency of 2630 MHz (41 samples)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,466 | INFO     | ..............................
[2025-11-26 16:35:56] 2025-11-26 21:35:01,466 | INFO     | . Timing measurements:
[2025-11-26 16:35:56] 2025-11-26 21:35:01,466 | INFO     | . get job = 0 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,466 | INFO     | . initial setup = 2 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,467 | INFO     | . payload setup = 5 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,467 | INFO     | . stage-in = 0 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,467 | INFO     | . payload execution = 69752 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,467 | INFO     | . stage-out = 4 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,467 | INFO     | . log creation = 0 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,467 | INFO     | ..............................
[2025-11-26 16:35:56] 2025-11-26 21:35:01,544 | INFO     | 
[2025-11-26 16:35:56] 2025-11-26 21:35:01,544 | INFO     | job summary report
[2025-11-26 16:35:56] 2025-11-26 21:35:01,544 | INFO     | --------------------------------------------------
[2025-11-26 16:35:56] 2025-11-26 21:35:01,544 | INFO     | PanDA job id: 6893859993
[2025-11-26 16:35:56] 2025-11-26 21:35:01,544 | INFO     | task id: 47523449
[2025-11-26 16:35:56] 2025-11-26 21:35:01,544 | INFO     | errors: (none)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | pilot state: finished 
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | transexitcode: 0
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | exeerrorcode: 0
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | exeerrordiag: 
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | exitcode: 0
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | exitmsg: OK
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | cpuconsumptiontime: 538442 s
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | nevents: 1000
[2025-11-26 16:35:56] 2025-11-26 21:35:01,545 | INFO     | neventsw: 0
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | pid: 30887
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | pgrp: 30887
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | corecount: 8
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | event service: False
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | sizes: {0: 2284093, 1: 2284292, 4: 2284554, 12: 2284582, 69761: 2340952, 69765: 2349946, 69767: 2350130, 69772: 2350472}
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | --------------------------------------------------
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | 
[2025-11-26 16:35:56] 2025-11-26 21:35:01,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 16:35:56] 2025-11-26 21:35:01,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:35:56] 2025-11-26 21:35:01,575 | INFO     | job 6893859993 has completed (purged errors)
[2025-11-26 16:35:56] 2025-11-26 21:35:01,575 | INFO     | overall cleanup function is called
[2025-11-26 16:35:56] 2025-11-26 21:35:02,592 | INFO     | --- collectZombieJob: --- 10, [30887]
[2025-11-26 16:35:56] 2025-11-26 21:35:02,592 | INFO     | zombie collector waiting for pid 30887
[2025-11-26 16:35:56] 2025-11-26 21:35:02,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:35:56] 2025-11-26 21:35:02,592 | INFO     | collected zombie processes
[2025-11-26 16:35:56] 2025-11-26 21:35:02,593 | INFO     | will attempt to kill all subprocesses of pid=30887
[2025-11-26 16:35:56] 2025-11-26 21:35:02,774 | INFO     | process IDs to be killed: [30887] (in reverse order)
[2025-11-26 16:35:56] 2025-11-26 21:35:02,822 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:35:56] 2025-11-26 21:35:02,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:35:56] 2025-11-26 21:35:02,828 | INFO     | did not find any defunct processes belonging to 30887
[2025-11-26 16:35:56] 2025-11-26 21:35:02,834 | INFO     | did not find any defunct processes belonging to 30887
[2025-11-26 16:35:56] 2025-11-26 21:35:02,836 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:35:56] 2025-11-26 21:35:02,836 | INFO     | ready for new job
[2025-11-26 16:35:56] 2025-11-26 21:35:02,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:35:56] 2025-11-26 21:35:02,841 | INFO     | ***************************************
[2025-11-26 16:35:56] 2025-11-26 21:35:02,841 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:35:56] 2025-11-26 21:35:02,842 | INFO     | ***************************************
[2025-11-26 16:35:56] 2025-11-26 21:35:02,842 | INFO     | 
[2025-11-26 16:35:56] 2025-11-26 21:35:02,843 | INFO     | architecture information:
[2025-11-26 16:35:56] 2025-11-26 21:35:02,843 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:35:56] 2025-11-26 21:35:02,858 | INFO     | cat /etc/os-release:
[2025-11-26 16:35:56] NAME="CentOS Linux"
[2025-11-26 16:35:56] VERSION="7 (Core)"
[2025-11-26 16:35:56] ID="centos"
[2025-11-26 16:35:56] ID_LIKE="rhel fedora"
[2025-11-26 16:35:56] VERSION_ID="7"
[2025-11-26 16:35:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:35:56] ANSI_COLOR="0;31"
[2025-11-26 16:35:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:35:56] HOME_URL="https://www.centos.org/"
[2025-11-26 16:35:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:35:56] 
[2025-11-26 16:35:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:35:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:35:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:35:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:35:56] 
[2025-11-26 16:35:56] 2025-11-26 21:35:02,858 | INFO     | ***************************************
[2025-11-26 16:35:56] 2025-11-26 21:35:03,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 16:35:56] 2025-11-26 21:35:03,378 | INFO     | sufficient remaining disk space (25489833984 B)
[2025-11-26 16:35:56] 2025-11-26 21:35:03,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:35:56] 2025-11-26 21:35:03,379 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:35:56] 2025-11-26 21:35:03,379 | INFO     | update_server=False
[2025-11-26 16:35:56] 2025-11-26 21:35:03,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:35:56] 2025-11-26 21:35:03,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:35:56] 2025-11-26 21:35:03,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:35:56] 2025-11-26 21:35:03,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:35:56] 2025-11-26 21:35:03,656 | INFO     | all job control threads have been joined
[2025-11-26 16:35:56] 2025-11-26 21:35:03,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:35:56] 2025-11-26 21:35:03,692 | INFO     | aborting loop
[2025-11-26 16:35:56] 2025-11-26 21:35:04,150 | INFO     | all payload control threads have been joined
[2025-11-26 16:35:56] 2025-11-26 21:35:04,248 | INFO     | all data control threads have been joined
[2025-11-26 16:35:56] 2025-11-26 21:35:04,384 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,385 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,661 | INFO     | [job] control thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,697 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,746 | INFO     | [job] validate thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,779 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,866 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:04,988 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,155 | INFO     | [payload] control thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,229 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,253 | INFO     | [data] control thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,385 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,545 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:05,822 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:07,387 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:35:56] 2025-11-26 21:35:33,279 | INFO     | PID=24431 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 16:35:56] 2025-11-26 21:35:33,279 | INFO     | .. there are 3 such processes running
[2025-11-26 16:35:56] 2025-11-26 21:35:33,284 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:35:56] 2025-11-26 21:35:33,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:35:56] 2025-11-26 21:35:33,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:35:56] 2025-11-26 21:35:49,651 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:35:56] 2025-11-26 21:35:51,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046663669568)>', '<ExcThread(monitor, started 140046376093440)>']
[2025-11-26 16:35:56] 2025-11-26 21:35:52,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:35:56] 2025-11-26 21:35:52,368 | INFO     | [monitor] control thread has ended
[2025-11-26 16:35:56] 2025-11-26 21:35:56,587 | INFO     | all workflow threads have been joined
[2025-11-26 16:35:56] 2025-11-26 21:35:56,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:35:56] 2025-11-26 21:35:56,591 | INFO     | traces error code: 0
[2025-11-26 16:35:56] 2025-11-26 21:35:56,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:35:56] 2025-11-26 21:35:56,721 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:35:56] 2025-11-26 21:35:56,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:35:56] 2025-11-26 21:35:56,726 [wrapper] pilotpid: 24431
[2025-11-26 16:35:56] 2025-11-26 21:35:56,729 [wrapper] Pilot exit status: 0
[2025-11-26 16:35:56] 2025-11-26 21:35:56,738 [wrapper] pandaids: 6893859993
[2025-11-26 16:35:56] 2025-11-26 21:35:56,776 [wrapper] cleanup supervisor_pilot 27447 24432
[2025-11-26 16:35:56] 2025-11-26 21:35:56,779 [wrapper] Test setup, not cleaning
[2025-11-26 16:35:56] 2025-11-26 21:35:56,781 [wrapper] apfmon messages muted
[2025-11-26 16:35:56] 2025-11-26 21:35:56,784 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:35:56] 2025-11-26 21:35:56,786 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:35:56]  *** Error codes and diagnostics ***
[2025-11-26 16:35:56]     "exeErrorCode": 0,
[2025-11-26 16:35:56]     "exeErrorDiag": "",
[2025-11-26 16:35:56]     "pilotErrorCode": 0,
[2025-11-26 16:35:56]     "pilotErrorDiag": "",
[2025-11-26 16:35:56]  *** Listing of results directory ***
[2025-11-26 16:35:56] total 1322064
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:29 queuedata.json
[2025-11-26 16:35:56] -rwx------ 1 boincer umatlas     36292 Nov 20 08:30 runpilot2-wrapper.sh
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas       100 Nov 25 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:35:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 21:11 run_atlas
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas       105 Nov 25 21:11 job.xml
[2025-11-26 16:35:56] -rw-r--r-- 2 boincer umatlas 409367504 Nov 25 21:11 EVNT.47493127._000537.pool.root.1
[2025-11-26 16:35:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 21:11 start_atlas.sh
[2025-11-26 16:35:56] drwxrwx--x 2 boincer umatlas      4096 Nov 25 21:11 shared
[2025-11-26 16:35:56] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 21:11 input.tar.gz
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas         0 Nov 25 21:11 boinc_lockfile
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 21:11 pandaJob.out
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas        57 Nov 25 21:11 setup.sh.local
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas    991877 Nov 25 21:11 agis_schedconf.cvmfs.json
[2025-11-26 16:35:56] drwx------ 5 boincer umatlas      4096 Nov 25 21:11 pilot3
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas       533 Nov 26 16:24 boinc_task_state.xml
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas      5953 Nov 26 16:31 init_data.xml
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas 916544110 Nov 26 16:34 HITS.47523449._005368.pool.root.1
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas      1067 Nov 26 16:34 memory_monitor_summary.json
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas   1516240 Nov 26 16:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas   2309892 Nov 26 16:34 log.47523449._005368.job.log.tgz.1
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas        95 Nov 26 16:35 pilot_heartbeat.json
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas      8665 Nov 26 16:35 heartbeat.json
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 16:35 boinc_mmap_file
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas        29 Nov 26 16:35 wrapper_checkpoint.txt
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas      4821 Nov 26 16:35 pilotlog.txt
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas   9667902 Nov 26 16:35 log.47523449._005368.job.log.1
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas       353 Nov 26 16:35 output.list
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas       620 Nov 26 16:35 runtime_log
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas  12001280 Nov 26 16:35 result.tar.gz
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 16:35 runtime_log.err
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas       668 Nov 26 16:35 Am2NDmLvJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUxHKDmWghXJo.diag
[2025-11-26 16:35:56] -rw-r--r-- 1 boincer umatlas     21309 Nov 26 16:35 stderr.txt
[2025-11-26 16:35:56] HITS file was successfully produced:
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas 916544110 Nov 26 16:34 shared/HITS.pool.root.1
[2025-11-26 16:35:56]  *** Contents of shared directory: ***
[2025-11-26 16:35:56] total 1307164
[2025-11-26 16:35:56] -rw-r--r-- 2 boincer umatlas 409367504 Nov 25 21:11 ATLAS.root_0
[2025-11-26 16:35:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 21:11 start_atlas.sh
[2025-11-26 16:35:56] -rw-r--r-- 2 boincer umatlas    590098 Nov 25 21:11 input.tar.gz
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas 916544110 Nov 26 16:34 HITS.pool.root.1
[2025-11-26 16:35:56] -rw------- 1 boincer umatlas  12001280 Nov 26 16:35 result.tar.gz
16:35:58 (20729): run_atlas exited; CPU time 537230.823711
16:35:58 (20729): called boinc_finish(0)

</stderr_txt>
]]>

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