Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:35:44 (32273): wrapper (7.7.26015): starting
20:35:44 (32273): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 20:35:44] Arguments: --nthreads 12
[2025-11-25 20:35:44] Threads: 12
[2025-11-25 20:35:44] Checking for CVMFS
[2025-11-25 20:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:35:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:35:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:35:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:35:45] 2.11.2.0 2947 286983 93512 153304 1 82 16158626 20275200 1 130560 1 129313424 99.971 16418040 12784 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 20:35:45] CVMFS is ok
[2025-11-25 20:35:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:35:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:35:45] Further information can be found at the LHC@home message board.
[2025-11-25 20:35:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:35:45] Checking for apptainer binary...
[2025-11-25 20:35:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:35:45] Running /usr/bin/apptainer --version
[2025-11-25 20:35:45] apptainer version 1.3.2-1.el7
[2025-11-25 20:35:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:35:46] c-205-18.aglt2.org
[2025-11-25 20:35:46] apptainer works
[2025-11-25 20:35:46] Set ATHENA_PROC_NUMBER=12
[2025-11-25 20:35:46] Set ATHENA_CORE_NUMBER=12
[2025-11-25 20:35:46] Starting ATLAS job with PandaID=6897139762
[2025-11-25 20:35:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:46:58]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:46:58] 2025-11-26 08:46:22,749 | INFO     | time since job start (25821s) is within the limit (172800.0s)
[2025-11-26 03:46:58] 2025-11-26 08:46:24,429 | INFO     | monitor loop #1937: job 0:6897139762 is in state 'finished'
[2025-11-26 03:46:58] 2025-11-26 08:46:24,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:46:58] 2025-11-26 08:46:24,755 | INFO     | time since job start (25823s) is within the limit (172800.0s)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,455 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 03:46:58] 2025-11-26 08:46:25,459 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-26 03:46:58] 2025-11-26 08:46:25,462 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139762/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,463 | INFO     | extracted standard info from prmon json
[2025-11-26 03:46:58] 2025-11-26 08:46:25,463 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:46:58] 2025-11-26 08:46:25,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:46:58] 2025-11-26 08:46:25,472 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:46:58] 2025-11-26 08:46:25,473 | INFO     | sum of square deviations: 23469164102.51538
[2025-11-26 03:46:58] 2025-11-26 08:46:25,476 | INFO     | sum of deviations: 357733200545.97125
[2025-11-26 03:46:58] 2025-11-26 08:46:25,477 | INFO     | mean x: 1764133863.2033098
[2025-11-26 03:46:58] 2025-11-26 08:46:25,477 | INFO     | mean y: 3427748.1631205673
[2025-11-26 03:46:58] 2025-11-26 08:46:25,477 | INFO     | intersect: -26886718416.335754
[2025-11-26 03:46:58] 2025-11-26 08:46:25,477 | INFO     | chi2: 5.652838653893437
[2025-11-26 03:46:58] 2025-11-26 08:46:25,478 | INFO     | sum of square deviations: 22646747004.80628
[2025-11-26 03:46:58] 2025-11-26 08:46:25,482 | INFO     | sum of deviations: 502674665475.4757
[2025-11-26 03:46:58] 2025-11-26 08:46:25,482 | INFO     | mean x: 1764133710.7057416
[2025-11-26 03:46:58] 2025-11-26 08:46:25,482 | INFO     | mean y: 3454587.0933014355
[2025-11-26 03:46:58] 2025-11-26 08:46:25,482 | INFO     | intersect: -39153839071.674446
[2025-11-26 03:46:58] 2025-11-26 08:46:25,482 | INFO     | chi2: 3.1380916232597955
[2025-11-26 03:46:58] 2025-11-26 08:46:25,483 | INFO     | current chi2=3.1380916232597955 (change=44.48644627246861 %)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,483 | INFO     | sum of square deviations: 21843772132.09215
[2025-11-26 03:46:58] 2025-11-26 08:46:25,487 | INFO     | sum of deviations: 557932424698.7218
[2025-11-26 03:46:58] 2025-11-26 08:46:25,487 | INFO     | mean x: 1764133558.2082324
[2025-11-26 03:46:58] 2025-11-26 08:46:25,487 | INFO     | mean y: 3465047.317191283
[2025-11-26 03:46:58] 2025-11-26 08:46:25,487 | INFO     | intersect: -45055937132.46702
[2025-11-26 03:46:58] 2025-11-26 08:46:25,488 | INFO     | chi2: 2.6054958619486652
[2025-11-26 03:46:58] 2025-11-26 08:46:25,488 | INFO     | current chi2=2.6054958619486652 (change=16.97196338575605 %)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,488 | INFO     | right removable region: 412
[2025-11-26 03:46:58] 2025-11-26 08:46:25,489 | INFO     | sum of square deviations: 22646694544.80628
[2025-11-26 03:46:58] 2025-11-26 08:46:25,492 | INFO     | sum of deviations: 212507526794.52618
[2025-11-26 03:46:58] 2025-11-26 08:46:25,492 | INFO     | mean x: 1764134015.7057416
[2025-11-26 03:46:58] 2025-11-26 08:46:25,493 | INFO     | mean y: 3454600.947368421
[2025-11-26 03:46:58] 2025-11-26 08:46:25,493 | INFO     | intersect: -16550473649.818014
[2025-11-26 03:46:58] 2025-11-26 08:46:25,493 | INFO     | chi2: 3.185563015834439
[2025-11-26 03:46:58] 2025-11-26 08:46:25,493 | INFO     | current chi2=3.185563015834439 (change=43.646666553265995 %)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,494 | INFO     | sum of square deviations: 21843692465.505985
[2025-11-26 03:46:58] 2025-11-26 08:46:25,497 | INFO     | sum of deviations: 180074798685.063
[2025-11-26 03:46:58] 2025-11-26 08:46:25,498 | INFO     | mean x: 1764134168.205811
[2025-11-26 03:46:58] 2025-11-26 08:46:25,498 | INFO     | mean y: 3460753.1404358353
[2025-11-26 03:46:58] 2025-11-26 08:46:25,498 | INFO     | intersect: -14539689664.068289
[2025-11-26 03:46:58] 2025-11-26 08:46:25,498 | INFO     | chi2: 3.127092012986825
[2025-11-26 03:46:58] 2025-11-26 08:46:25,498 | INFO     | current chi2=3.127092012986825 (change=1.835499801980766 %)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,499 | INFO     | left removable region: 20
[2025-11-26 03:46:58] 2025-11-26 08:46:25,499 | INFO     | sum of square deviations: 18678226416.846817
[2025-11-26 03:46:58] 2025-11-26 08:46:25,502 | INFO     | sum of deviations: 337778387415.2093
[2025-11-26 03:46:58] 2025-11-26 08:46:25,503 | INFO     | mean x: 1764134137.7091837
[2025-11-26 03:46:58] 2025-11-26 08:46:25,503 | INFO     | mean y: 3507642.7474489794
[2025-11-26 03:46:58] 2025-11-26 08:46:25,503 | INFO     | intersect: -31899220749.176823
[2025-11-26 03:46:58] 2025-11-26 08:46:25,503 | INFO     | chi2: 0.03303698280056132
[2025-11-26 03:46:58] 2025-11-26 08:46:25,503 | INFO     | current memory leak: 18.08 B/s (using 392 data points, chi2=0.03)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | could have reported an average CPU frequency of 2409 MHz (18 samples)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | ..............................
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | . Timing measurements:
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | . get job = 0 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | . initial setup = 2 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | . payload setup = 8 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,504 | INFO     | . stage-in = 0 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,505 | INFO     | . payload execution = 25783 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,505 | INFO     | . stage-out = 3 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,505 | INFO     | . log creation = 0 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,505 | INFO     | ..............................
[2025-11-26 03:46:58] 2025-11-26 08:46:25,588 | INFO     | 
[2025-11-26 03:46:58] 2025-11-26 08:46:25,588 | INFO     | job summary report
[2025-11-26 03:46:58] 2025-11-26 08:46:25,588 | INFO     | --------------------------------------------------
[2025-11-26 03:46:58] 2025-11-26 08:46:25,588 | INFO     | PanDA job id: 6897139762
[2025-11-26 03:46:58] 2025-11-26 08:46:25,588 | INFO     | task id: 47556161
[2025-11-26 03:46:58] 2025-11-26 08:46:25,589 | INFO     | errors: (none)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:46:58] 2025-11-26 08:46:25,589 | INFO     | pilot state: finished 
[2025-11-26 03:46:58] 2025-11-26 08:46:25,589 | INFO     | transexitcode: 0
[2025-11-26 03:46:58] 2025-11-26 08:46:25,589 | INFO     | exeerrorcode: 0
[2025-11-26 03:46:58] 2025-11-26 08:46:25,589 | INFO     | exeerrordiag: 
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | exitcode: 0
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | exitmsg: OK
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | cpuconsumptiontime: 295368 s
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | nevents: 1000
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | neventsw: 0
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | pid: 10131
[2025-11-26 03:46:58] 2025-11-26 08:46:25,590 | INFO     | pgrp: 10131
[2025-11-26 03:46:58] 2025-11-26 08:46:25,591 | INFO     | corecount: 12
[2025-11-26 03:46:58] 2025-11-26 08:46:25,591 | INFO     | event service: False
[2025-11-26 03:46:58] 2025-11-26 08:46:25,591 | INFO     | sizes: {0: 2284265, 1: 2284265, 6: 2284555, 11: 2284583, 25795: 2321849, 25796: 2321848, 25800: 2331082, 25808: 2331272}
[2025-11-26 03:46:58] 2025-11-26 08:46:25,591 | INFO     | --------------------------------------------------
[2025-11-26 03:46:58] 2025-11-26 08:46:25,591 | INFO     | 
[2025-11-26 03:46:58] 2025-11-26 08:46:25,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 03:46:58] 2025-11-26 08:46:25,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:46:58] 2025-11-26 08:46:25,622 | INFO     | job 6897139762 has completed (purged errors)
[2025-11-26 03:46:58] 2025-11-26 08:46:25,622 | INFO     | overall cleanup function is called
[2025-11-26 03:46:58] 2025-11-26 08:46:26,637 | INFO     | --- collectZombieJob: --- 10, [10131]
[2025-11-26 03:46:58] 2025-11-26 08:46:26,637 | INFO     | zombie collector waiting for pid 10131
[2025-11-26 03:46:58] 2025-11-26 08:46:26,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:46:58] 2025-11-26 08:46:26,645 | INFO     | collected zombie processes
[2025-11-26 03:46:58] 2025-11-26 08:46:26,645 | INFO     | will attempt to kill all subprocesses of pid=10131
[2025-11-26 03:46:58] 2025-11-26 08:46:26,739 | INFO     | process IDs to be killed: [10131] (in reverse order)
[2025-11-26 03:46:58] 2025-11-26 08:46:26,791 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:46:58] 2025-11-26 08:46:26,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:46:58] 2025-11-26 08:46:26,795 | INFO     | did not find any defunct processes belonging to 10131
[2025-11-26 03:46:58] 2025-11-26 08:46:26,798 | INFO     | did not find any defunct processes belonging to 10131
[2025-11-26 03:46:58] 2025-11-26 08:46:26,801 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:46:58] 2025-11-26 08:46:26,801 | INFO     | ready for new job
[2025-11-26 03:46:58] 2025-11-26 08:46:26,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:46:58] 2025-11-26 08:46:26,803 | INFO     | ***************************************
[2025-11-26 03:46:58] 2025-11-26 08:46:26,804 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:46:58] 2025-11-26 08:46:26,804 | INFO     | ***************************************
[2025-11-26 03:46:58] 2025-11-26 08:46:26,804 | INFO     | 
[2025-11-26 03:46:58] 2025-11-26 08:46:26,804 | INFO     | architecture information:
[2025-11-26 03:46:58] 2025-11-26 08:46:26,805 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:46:58] 2025-11-26 08:46:26,820 | INFO     | cat /etc/os-release:
[2025-11-26 03:46:58] NAME="CentOS Linux"
[2025-11-26 03:46:58] VERSION="7 (Core)"
[2025-11-26 03:46:58] ID="centos"
[2025-11-26 03:46:58] ID_LIKE="rhel fedora"
[2025-11-26 03:46:58] VERSION_ID="7"
[2025-11-26 03:46:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:46:58] ANSI_COLOR="0;31"
[2025-11-26 03:46:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:46:58] HOME_URL="https://www.centos.org/"
[2025-11-26 03:46:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:46:58] 
[2025-11-26 03:46:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:46:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:46:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:46:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:46:58] 
[2025-11-26 03:46:58] 2025-11-26 08:46:26,821 | INFO     | ***************************************
[2025-11-26 03:46:58] 2025-11-26 08:46:27,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 03:46:58] 2025-11-26 08:46:27,341 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-26 03:46:58] 2025-11-26 08:46:27,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:46:58] 2025-11-26 08:46:27,342 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:46:58] 2025-11-26 08:46:27,342 | INFO     | update_server=False
[2025-11-26 03:46:58] 2025-11-26 08:46:27,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:46:58] 2025-11-26 08:46:27,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:46:58] 2025-11-26 08:46:27,353 | INFO     | all payload control threads have been joined
[2025-11-26 03:46:58] 2025-11-26 08:46:27,497 | INFO     | all data control threads have been joined
[2025-11-26 03:46:58] 2025-11-26 08:46:27,642 | INFO     | all job control threads have been joined
[2025-11-26 03:46:58] 2025-11-26 08:46:27,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:46:58] 2025-11-26 08:46:27,938 | INFO     | aborting loop
[2025-11-26 03:46:58] 2025-11-26 08:46:28,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:46:58] 2025-11-26 08:46:28,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:46:58] 2025-11-26 08:46:28,348 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,348 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,358 | INFO     | [payload] control thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,364 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,503 | INFO     | [data] control thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,516 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,648 | INFO     | [job] control thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,925 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:28,943 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:29,066 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:29,106 | INFO     | [job] validate thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:29,258 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:29,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:29,823 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:30,048 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:32,129 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:46:58] 2025-11-26 08:46:43,325 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:46:58] 2025-11-26 08:46:45,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270509971264)>', '<ExcThread(monitor, started 140269387241216)>']
[2025-11-26 03:46:58] 2025-11-26 08:46:50,436 | INFO     | all workflow threads have been joined
[2025-11-26 03:46:58] 2025-11-26 08:46:50,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:46:58] 2025-11-26 08:46:50,437 | INFO     | traces error code: 0
[2025-11-26 03:46:58] 2025-11-26 08:46:50,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:46:58] 2025-11-26 08:46:57,956 | INFO     | PID=3690 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 03:46:58] 2025-11-26 08:46:57,957 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:46:58] 2025-11-26 08:46:57,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:46:58] 2025-11-26 08:46:57,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:46:58] 2025-11-26 08:46:57,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:46:58] 2025-11-26 08:46:57,957 | INFO     | [monitor] control thread has ended
[2025-11-26 03:46:58] 2025-11-26 08:46:58,058 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:46:58] 2025-11-26 08:46:58,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:46:58] 2025-11-26 08:46:58,066 [wrapper] pilotpid: 3690
[2025-11-26 03:46:58] 2025-11-26 08:46:58,071 [wrapper] Pilot exit status: 0
[2025-11-26 03:46:58] 2025-11-26 08:46:58,085 [wrapper] pandaids: 6897139762
[2025-11-26 03:46:58] 2025-11-26 08:46:58,125 [wrapper] cleanup supervisor_pilot  1425 3691
[2025-11-26 03:46:58] 2025-11-26 08:46:58,129 [wrapper] Test setup, not cleaning
[2025-11-26 03:46:58] 2025-11-26 08:46:58,133 [wrapper] apfmon messages muted
[2025-11-26 03:46:58] 2025-11-26 08:46:58,137 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:46:58] 2025-11-26 08:46:58,141 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:46:58]  *** Error codes and diagnostics ***
[2025-11-26 03:46:58]     "exeErrorCode": 0,
[2025-11-26 03:46:58]     "exeErrorDiag": "",
[2025-11-26 03:46:58]     "pilotErrorCode": 0,
[2025-11-26 03:46:58]     "pilotErrorDiag": "",
[2025-11-26 03:46:58]  *** Listing of results directory ***
[2025-11-26 03:46:58] total 1315360
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 03:46:58] -rwx------ 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas       100 Nov 25 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:46:58] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 20:35 run_atlas
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas       105 Nov 25 20:35 job.xml
[2025-11-26 03:46:58] -rw-r--r-- 2 boincer umatlas 410037199 Nov 25 20:35 EVNT.47483658._002201.pool.root.1
[2025-11-26 03:46:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 20:35 start_atlas.sh
[2025-11-26 03:46:58] drwxrwx--x 2 boincer umatlas      4096 Nov 25 20:35 shared
[2025-11-26 03:46:58] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 20:35 input.tar.gz
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas         0 Nov 25 20:35 boinc_lockfile
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 20:35 pandaJob.out
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas        57 Nov 25 20:35 setup.sh.local
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas    991877 Nov 25 20:35 agis_schedconf.cvmfs.json
[2025-11-26 03:46:58] drwx------ 5 boincer umatlas      4096 Nov 25 20:36 pilot3
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas       532 Nov 26 03:35 boinc_task_state.xml
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas 921397080 Nov 26 03:45 HITS.47556161._001842.pool.root.1
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 03:45 init_data.xml
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas        95 Nov 26 03:46 pilot_heartbeat.json
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas      1061 Nov 26 03:46 memory_monitor_summary.json
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas   1516240 Nov 26 03:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas   2172674 Nov 26 03:46 log.47556161._001842.job.log.tgz.1
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas      8679 Nov 26 03:46 heartbeat.json
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 03:46 boinc_mmap_file
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas        29 Nov 26 03:46 wrapper_checkpoint.txt
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas       744 Nov 26 03:46 pilotlog.txt
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas   3614602 Nov 26 03:46 log.47556161._001842.job.log.1
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas       353 Nov 26 03:46 output.list
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas       620 Nov 26 03:46 runtime_log
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas   5806080 Nov 26 03:46 result.tar.gz
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 03:46 runtime_log.err
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas       670 Nov 26 03:46 NHLNDm8UBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3PMKDmNoIChm.diag
[2025-11-26 03:46:58] -rw-r--r-- 1 boincer umatlas     21324 Nov 26 03:46 stderr.txt
[2025-11-26 03:46:58] HITS file was successfully produced:
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas 921397080 Nov 26 03:45 shared/HITS.pool.root.1
[2025-11-26 03:46:58]  *** Contents of shared directory: ***
[2025-11-26 03:46:58] total 1306508
[2025-11-26 03:46:58] -rw-r--r-- 2 boincer umatlas 410037199 Nov 25 20:35 ATLAS.root_0
[2025-11-26 03:46:58] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 20:35 start_atlas.sh
[2025-11-26 03:46:58] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 20:35 input.tar.gz
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas 921397080 Nov 26 03:45 HITS.pool.root.1
[2025-11-26 03:46:58] -rw------- 1 boincer umatlas   5806080 Nov 26 03:46 result.tar.gz
03:47:00 (32273): run_atlas exited; CPU time 288515.245716
03:47:00 (32273): called boinc_finish(0)

</stderr_txt>
]]>

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