Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:23:30 (2991486): wrapper (7.7.26015): starting
20:23:30 (2991486): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:23:30] Arguments: --nthreads 8
[2025-11-25 20:23:30] Threads: 8
[2025-11-25 20:23:30] Checking for CVMFS
[2025-11-25 20:23:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:23:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:23:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:23:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:23:32] 2.13.3.0 7030 4704 226832 153304 0 193 19509524 32935937 59066 16776704 0 37412406 99.723 29463642 32720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:23:32] CVMFS is ok
[2025-11-25 20:23:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:23:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:23:32] Further information can be found at the LHC@home message board.
[2025-11-25 20:23:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:23:32] Checking for apptainer binary...
[2025-11-25 20:23:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:23:32] Running /usr/bin/apptainer --version
[2025-11-25 20:23:32] apptainer version 1.4.4-1.el9
[2025-11-25 20:23:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:23:33] lc-10-10.aglt2.org
[2025-11-25 20:23:33] apptainer works
[2025-11-25 20:23:33] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:23:33] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:23:33] Starting ATLAS job with PandaID=6897373022
[2025-11-25 20:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:50:57]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:50:57] 2025-11-26 22:50:04,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:50:57] 2025-11-26 22:50:05,091 | INFO     | time since job start (77141s) is within the limit (172800.0s)
[2025-11-26 17:50:57] 2025-11-26 22:50:07,098 | INFO     | time since job start (77143s) is within the limit (172800.0s)
[2025-11-26 17:50:57] 2025-11-26 22:50:07,221 | INFO     | monitor loop #3845: job 0:6897373022 is in state 'finished'
[2025-11-26 17:50:57] 2025-11-26 22:50:07,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:50:57] 2025-11-26 22:50:09,127 | INFO     | time since job start (77145s) is within the limit (172800.0s)
[2025-11-26 17:50:57] 2025-11-26 22:50:09,739 | INFO     | monitor loop #3846: job 0:6897373022 is in state 'finished'
[2025-11-26 17:50:57] 2025-11-26 22:50:09,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:50:57] 2025-11-26 22:50:11,134 | INFO     | time since job start (77147s) is within the limit (172800.0s)
[2025-11-26 17:50:57] 2025-11-26 22:50:12,305 | INFO     | monitor loop #3847: job 0:6897373022 is in state 'finished'
[2025-11-26 17:50:57] 2025-11-26 22:50:12,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:50:57] 2025-11-26 22:50:14,359 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:50:57] 2025-11-26 22:50:14,401 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2745.3022187500014
[2025-11-26 17:50:57] 2025-11-26 22:50:14,424 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897373022/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:50:57] 2025-11-26 22:50:14,425 | INFO     | extracted standard info from prmon json
[2025-11-26 17:50:57] 2025-11-26 22:50:14,425 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:50:57] 2025-11-26 22:50:14,425 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:50:57] 2025-11-26 22:50:14,447 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:50:57] 2025-11-26 22:50:14,448 | INFO     | sum of square deviations: 623400034629.6644
[2025-11-26 17:50:57] 2025-11-26 22:50:14,594 | INFO     | sum of deviations: 2519371171785.528
[2025-11-26 17:50:57] 2025-11-26 22:50:14,713 | INFO     | mean x: 1764158833.6315372
[2025-11-26 17:50:57] 2025-11-26 22:50:14,714 | INFO     | mean y: 2906589.996830428
[2025-11-26 17:50:57] 2025-11-26 22:50:14,714 | INFO     | intersect: -7126658153.358386
[2025-11-26 17:50:57] 2025-11-26 22:50:14,715 | INFO     | chi2: 18.112717154532465
[2025-11-26 17:50:57] 2025-11-26 22:50:14,717 | INFO     | sum of square deviations: 616021612032.0771
[2025-11-26 17:50:57] 2025-11-26 22:50:14,816 | INFO     | PID=3000057 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:50:57] 2025-11-26 22:50:14,817 | INFO     | .. there are 92 such processes running
[2025-11-26 17:50:57] 2025-11-26 22:50:14,832 | INFO     | monitor loop #3848: job 0:6897373022 is in state 'finished'
[2025-11-26 17:50:57] 2025-11-26 22:50:14,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:50:57] 2025-11-26 22:50:14,907 | INFO     | sum of deviations: 2933595194387.9316
[2025-11-26 17:50:57] 2025-11-26 22:50:14,907 | INFO     | mean x: 1764158681.1320605
[2025-11-26 17:50:57] 2025-11-26 22:50:14,907 | INFO     | mean y: 2915149.6268894193
[2025-11-26 17:50:57] 2025-11-26 22:50:14,907 | INFO     | intersect: -8398295665.095756
[2025-11-26 17:50:57] 2025-11-26 22:50:14,909 | INFO     | chi2: 14.972535492253908
[2025-11-26 17:50:57] 2025-11-26 22:50:14,909 | INFO     | current chi2=14.972535492253908 (change=17.33688896860386 %)
[2025-11-26 17:50:57] 2025-11-26 22:50:14,914 | INFO     | right removable region: 1256
[2025-11-26 17:50:57] 2025-11-26 22:50:14,916 | INFO     | sum of square deviations: 616018431160.2413
[2025-11-26 17:50:57] 2025-11-26 22:50:15,131 | INFO     | sum of deviations: 2031691032160.3225
[2025-11-26 17:50:57] 2025-11-26 22:50:15,131 | INFO     | mean x: 1764158986.1638823
[2025-11-26 17:50:57] 2025-11-26 22:50:15,132 | INFO     | mean y: 2916665.8528241846
[2025-11-26 17:50:57] 2025-11-26 22:50:15,132 | INFO     | intersect: -5815457931.71155
[2025-11-26 17:50:57] 2025-11-26 22:50:15,151 | INFO     | chi2: 14.451994719989475
[2025-11-26 17:50:57] 2025-11-26 22:50:15,152 | INFO     | current chi2=14.451994719989475 (change=20.210785622669224 %)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,152 | INFO     | left removable region: 10
[2025-11-26 17:50:57] 2025-11-26 22:50:15,153 | INFO     | sum of square deviations: 599988452084.1089
[2025-11-26 17:50:57] 2025-11-26 22:50:15,370 | INFO     | sum of deviations: 2341703146877.768
[2025-11-26 17:50:57] 2025-11-26 22:50:15,370 | INFO     | mean x: 1764158955.695024
[2025-11-26 17:50:57] 2025-11-26 22:50:15,370 | INFO     | mean y: 2930901.7046548957
[2025-11-26 17:50:57] 2025-11-26 22:50:15,371 | INFO     | intersect: -6882429247.801214
[2025-11-26 17:50:57] 2025-11-26 22:50:15,372 | INFO     | chi2: 10.08762841692387
[2025-11-26 17:50:57] 2025-11-26 22:50:15,372 | INFO     | current memory leak: 3.90 B/s (using 1246 data points, chi2=10.09)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,406 | INFO     | could have reported an average CPU frequency of 2718 MHz (45 samples)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,406 | INFO     | ..............................
[2025-11-26 17:50:57] 2025-11-26 22:50:15,406 | INFO     | . Timing measurements:
[2025-11-26 17:50:57] 2025-11-26 22:50:15,406 | INFO     | . get job = 0 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,406 | INFO     | . initial setup = 4 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,406 | INFO     | . payload setup = 30 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,407 | INFO     | . stage-in = 0 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,407 | INFO     | . payload execution = 77012 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,407 | INFO     | . stage-out = 11 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,407 | INFO     | . log creation = 3 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,407 | INFO     | ..............................
[2025-11-26 17:50:57] 2025-11-26 22:50:15,791 | INFO     | 
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | job summary report
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | --------------------------------------------------
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | PanDA job id: 6897373022
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | task id: 47556161
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | errors: (none)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | pilot state: finished 
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | transexitcode: 0
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | exeerrorcode: 0
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | exeerrordiag: 
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | exitcode: 0
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | exitmsg: OK
[2025-11-26 17:50:57] 2025-11-26 22:50:15,792 | INFO     | cpuconsumptiontime: 263546 s
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | nevents: 1000
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | neventsw: 0
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | pid: 3018914
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | pgrp: 3018914
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | corecount: 8
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | event service: False
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | sizes: {0: 2284038, 1: 2284293, 2: 2284321, 13: 2284321, 20: 2284639, 23: 2284667, 77044: 2344149, 77056: 2353143, 77057: 2353199, 77105: 2353445}
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | --------------------------------------------------
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | 
[2025-11-26 17:50:57] 2025-11-26 22:50:15,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 17:50:57] 2025-11-26 22:50:15,818 | INFO     | time since job start (77151s) is within the limit (172800.0s)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,819 | INFO     | 77156s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | job 6897373022 has completed (purged errors)
[2025-11-26 17:50:57] 2025-11-26 22:50:15,923 | INFO     | overall cleanup function is called
[2025-11-26 17:50:57] 2025-11-26 22:50:16,983 | INFO     | --- collectZombieJob: --- 10, [3018914]
[2025-11-26 17:50:57] 2025-11-26 22:50:16,983 | INFO     | zombie collector waiting for pid 3018914
[2025-11-26 17:50:57] 2025-11-26 22:50:16,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:50:57] 2025-11-26 22:50:16,984 | INFO     | collected zombie processes
[2025-11-26 17:50:57] 2025-11-26 22:50:16,984 | INFO     | will attempt to kill all subprocesses of pid=3018914
[2025-11-26 17:50:57] 2025-11-26 22:50:18,951 | INFO     | process IDs to be killed: [3018914] (in reverse order)
[2025-11-26 17:50:57] 2025-11-26 22:50:19,332 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:50:57] 2025-11-26 22:50:19,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:50:57] 2025-11-26 22:50:19,450 | INFO     | did not find any defunct processes belonging to 3018914
[2025-11-26 17:50:57] 2025-11-26 22:50:19,929 | INFO     | did not find any defunct processes belonging to 3018914
[2025-11-26 17:50:57] 2025-11-26 22:50:20,037 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:50:57] 2025-11-26 22:50:20,037 | INFO     | ready for new job
[2025-11-26 17:50:57] 2025-11-26 22:50:20,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:50:57] 2025-11-26 22:50:20,050 | INFO     | ***************************************
[2025-11-26 17:50:57] 2025-11-26 22:50:20,050 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:50:57] 2025-11-26 22:50:20,050 | INFO     | ***************************************
[2025-11-26 17:50:57] 2025-11-26 22:50:20,050 | INFO     | 
[2025-11-26 17:50:57] 2025-11-26 22:50:20,060 | INFO     | architecture information:
[2025-11-26 17:50:57] 2025-11-26 22:50:20,157 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:50:57] 2025-11-26 22:50:20,350 | INFO     | cat /etc/os-release:
[2025-11-26 17:50:57] NAME="CentOS Linux"
[2025-11-26 17:50:57] VERSION="7 (Core)"
[2025-11-26 17:50:57] ID="centos"
[2025-11-26 17:50:57] ID_LIKE="rhel fedora"
[2025-11-26 17:50:57] VERSION_ID="7"
[2025-11-26 17:50:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:50:57] ANSI_COLOR="0;31"
[2025-11-26 17:50:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:50:57] HOME_URL="https://www.centos.org/"
[2025-11-26 17:50:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:50:57] 
[2025-11-26 17:50:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:50:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:50:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:50:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:50:57] 
[2025-11-26 17:50:57] 2025-11-26 22:50:20,350 | INFO     | ***************************************
[2025-11-26 17:50:57] 2025-11-26 22:50:20,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 17:50:57] 2025-11-26 22:50:20,982 | INFO     | sufficient remaining disk space (82735792128 B)
[2025-11-26 17:50:57] 2025-11-26 22:50:20,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:50:57] 2025-11-26 22:50:20,983 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:50:57] 2025-11-26 22:50:20,983 | INFO     | update_server=False
[2025-11-26 17:50:57] 2025-11-26 22:50:20,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:50:57] 2025-11-26 22:50:20,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:50:57] 2025-11-26 22:50:20,983 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:50:57] 2025-11-26 22:50:20,983 | INFO     | aborting loop
[2025-11-26 17:50:57] 2025-11-26 22:50:20,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:50:57] 2025-11-26 22:50:21,751 | INFO     | all data control threads have been joined
[2025-11-26 17:50:57] 2025-11-26 22:50:21,988 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:21,989 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:21,994 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,002 | INFO     | all job control threads have been joined
[2025-11-26 17:50:57] 2025-11-26 22:50:22,002 | INFO     | all payload control threads have been joined
[2025-11-26 17:50:57] 2025-11-26 22:50:22,046 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,075 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,171 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,303 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,466 | INFO     | [job] validate thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,757 | INFO     | [data] control thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:22,990 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:23,008 | INFO     | [job] control thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:23,014 | INFO     | [payload] control thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:23,047 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:23,097 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:23,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:50:57] 2025-11-26 22:50:27,675 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:50:57] 2025-11-26 22:50:47,456 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:50:57] 2025-11-26 22:50:47,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081353176896)>', '<ExcThread(monitor, started 140080417072896)>']
[2025-11-26 17:50:57] 2025-11-26 22:50:50,922 | INFO     | PID=3000057 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:50:57] 2025-11-26 22:50:50,922 | INFO     | .. there are 92 such processes running
[2025-11-26 17:50:57] 2025-11-26 22:50:50,927 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:50:57] 2025-11-26 22:50:50,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:50:57] 2025-11-26 22:50:50,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:50:57] 2025-11-26 22:50:50,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:50:57] 2025-11-26 22:50:50,927 | INFO     | [monitor] control thread has ended
[2025-11-26 17:50:57] 2025-11-26 22:50:52,729 | INFO     | all workflow threads have been joined
[2025-11-26 17:50:57] 2025-11-26 22:50:52,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:50:57] 2025-11-26 22:50:52,730 | INFO     | traces error code: 0
[2025-11-26 17:50:57] 2025-11-26 22:50:52,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:50:57] 2025-11-26 22:50:53,744 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:50:57] 2025-11-26 22:50:53,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:50:57] 2025-11-26 22:50:53,813 [wrapper] pilotpid: 3000057
[2025-11-26 17:50:57] 2025-11-26 22:50:53,834 [wrapper] Pilot exit status: 0
[2025-11-26 17:50:57] 2025-11-26 22:50:54,085 [wrapper] pandaids: 6897373022
[2025-11-26 17:50:57] 2025-11-26 22:50:55,169 [wrapper] cleanup supervisor_pilot 3833067 3000058
[2025-11-26 17:50:57] 2025-11-26 22:50:55,226 [wrapper] Test setup, not cleaning
[2025-11-26 17:50:57] 2025-11-26 22:50:55,270 [wrapper] apfmon messages muted
[2025-11-26 17:50:57] 2025-11-26 22:50:55,311 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:50:57] 2025-11-26 22:50:55,391 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:50:57]  *** Error codes and diagnostics ***
[2025-11-26 17:50:57]     "exeErrorCode": 0,
[2025-11-26 17:50:57]     "exeErrorDiag": "",
[2025-11-26 17:50:57]     "pilotErrorCode": 0,
[2025-11-26 17:50:57]     "pilotErrorDiag": "",
[2025-11-26 17:50:57]  *** Listing of results directory ***
[2025-11-26 17:50:57] total 1329052
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 17:50:57] -rwx------. 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:50:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:23 run_atlas
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:23 job.xml
[2025-11-26 17:50:57] -rw-r--r--. 2 boincer umatlas 410645205 Nov 25 20:23 EVNT.47483658._002211.pool.root.1
[2025-11-26 17:50:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:23 start_atlas.sh
[2025-11-26 17:50:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:23 shared
[2025-11-26 17:50:57] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 20:23 input.tar.gz
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:23 boinc_lockfile
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 20:23 pandaJob.out
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas        57 Nov 25 20:23 setup.sh.local
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas    991877 Nov 25 20:24 agis_schedconf.cvmfs.json
[2025-11-26 17:50:57] drwx------. 5 boincer umatlas      4096 Nov 25 20:24 pilot3
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:26 boinc_task_state.xml
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas      6884 Nov 26 17:47 init_data.xml
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas 924466398 Nov 26 17:47 HITS.47556161._001950.pool.root.1
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas      1060 Nov 26 17:49 memory_monitor_summary.json
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:49 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas   2257220 Nov 26 17:49 log.47556161._001950.job.log.tgz.1
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas      8625 Nov 26 17:50 heartbeat.json
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas        95 Nov 26 17:50 pilot_heartbeat.json
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas      4824 Nov 26 17:50 pilotlog.txt
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas   8697275 Nov 26 17:50 log.47556161._001950.job.log.1
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:50 boinc_mmap_file
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas       353 Nov 26 17:50 output.list
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:50 runtime_log
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas  10977280 Nov 26 17:50 result.tar.gz
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 17:50 runtime_log.err
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas       660 Nov 26 17:50 f5hKDmGVBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfQMKDmG77Cnn.diag
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:50 wrapper_checkpoint.txt
[2025-11-26 17:50:57] -rw-r--r--. 1 boincer umatlas     21897 Nov 26 17:50 stderr.txt
[2025-11-26 17:50:57] HITS file was successfully produced:
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas 924466398 Nov 26 17:47 shared/HITS.pool.root.1
[2025-11-26 17:50:57]  *** Contents of shared directory: ***
[2025-11-26 17:50:57] total 1315148
[2025-11-26 17:50:57] -rw-r--r--. 2 boincer umatlas 410645205 Nov 25 20:23 ATLAS.root_0
[2025-11-26 17:50:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:23 start_atlas.sh
[2025-11-26 17:50:57] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 20:23 input.tar.gz
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas 924466398 Nov 26 17:47 HITS.pool.root.1
[2025-11-26 17:50:57] -rw-------. 1 boincer umatlas  10977280 Nov 26 17:50 result.tar.gz
17:51:19 (2991486): run_atlas exited; CPU time 267789.349742
17:51:19 (2991486): called boinc_finish(0)

</stderr_txt>
]]>

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