Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:29:36 (32234): wrapper (7.7.26015): starting
20:29:36 (32234): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:29:36] Arguments: --nthreads 8
[2025-11-25 20:29:36] Threads: 8
[2025-11-25 20:29:36] Checking for CVMFS
[2025-11-25 20:29:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:29:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:29:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:29:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:29:36] 2.11.2.0 2913 72642 84752 153304 2 82 17042840 20275201 1 130560 0 22068060 99.906 3524678 30888 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 20:29:36] CVMFS is ok
[2025-11-25 20:29:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:29:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:29:36] Further information can be found at the LHC@home message board.
[2025-11-25 20:29:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:29:36] Checking for apptainer binary...
[2025-11-25 20:29:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:29:36] Running /usr/bin/apptainer --version
[2025-11-25 20:29:36] apptainer version 1.3.2-1.el7
[2025-11-25 20:29:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:29:38] c-115-15.aglt2.org
[2025-11-25 20:29:38] apptainer works
[2025-11-25 20:29:38] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:29:38] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:29:38] Starting ATLAS job with PandaID=6897139753
[2025-11-25 20:29:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:32:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:32:30] 2025-11-26 12:31:56,020 | INFO     | monitor loop #2933: job 0:6897139753 is in state 'finished'
[2025-11-26 07:32:30] 2025-11-26 12:31:56,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:32:30] 2025-11-26 12:31:56,062 | INFO     | PID=3624 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 07:32:30] 2025-11-26 12:31:57,063 | INFO     | time since job start (39722s) is within the limit (172800.0s)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,759 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 07:32:30] 2025-11-26 12:31:57,762 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-26 07:32:30] 2025-11-26 12:31:57,765 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139753/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,766 | INFO     | extracted standard info from prmon json
[2025-11-26 07:32:30] 2025-11-26 12:31:57,766 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:32:30] 2025-11-26 12:31:57,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:32:30] 2025-11-26 12:31:57,778 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:32:30] 2025-11-26 12:31:57,779 | INFO     | sum of square deviations: 85550354423.56978
[2025-11-26 07:32:30] 2025-11-26 12:31:57,787 | INFO     | sum of deviations: 642287401090.0863
[2025-11-26 07:32:30] 2025-11-26 12:31:57,787 | INFO     | mean x: 1764140452.5698924
[2025-11-26 07:32:30] 2025-11-26 12:31:57,787 | INFO     | mean y: 2983614.514592934
[2025-11-26 07:32:30] 2025-11-26 12:31:57,788 | INFO     | intersect: -13241674389.226315
[2025-11-26 07:32:30] 2025-11-26 12:31:57,788 | INFO     | chi2: 5.746006923407298
[2025-11-26 07:32:30] 2025-11-26 12:31:57,789 | INFO     | sum of square deviations: 83594365784.43353
[2025-11-26 07:32:30] 2025-11-26 12:31:57,797 | INFO     | sum of deviations: 863820625167.4088
[2025-11-26 07:32:30] 2025-11-26 12:31:57,798 | INFO     | mean x: 1764140300.0743034
[2025-11-26 07:32:30] 2025-11-26 12:31:57,798 | INFO     | mean y: 3000873.241486068
[2025-11-26 07:32:30] 2025-11-26 12:31:57,798 | INFO     | intersect: -18226705908.946663
[2025-11-26 07:32:30] 2025-11-26 12:31:57,798 | INFO     | chi2: 2.6499363052083034
[2025-11-26 07:32:30] 2025-11-26 12:31:57,799 | INFO     | current chi2=2.6499363052083034 (change=53.88212474277824 %)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,799 | INFO     | sum of square deviations: 81668345774.58026
[2025-11-26 07:32:30] 2025-11-26 12:31:57,807 | INFO     | sum of deviations: 884174396445.5631
[2025-11-26 07:32:30] 2025-11-26 12:31:57,807 | INFO     | mean x: 1764140147.575663
[2025-11-26 07:32:30] 2025-11-26 12:31:57,808 | INFO     | mean y: 3002471.7925117007
[2025-11-26 07:32:30] 2025-11-26 12:31:57,808 | INFO     | intersect: -19096289125.6332
[2025-11-26 07:32:30] 2025-11-26 12:31:57,808 | INFO     | chi2: 2.480842553203363
[2025-11-26 07:32:30] 2025-11-26 12:31:57,809 | INFO     | current chi2=2.480842553203363 (change=6.381049675518458 %)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,809 | INFO     | right removable region: 640
[2025-11-26 07:32:30] 2025-11-26 12:31:57,809 | INFO     | sum of square deviations: 83594139474.43344
[2025-11-26 07:32:30] 2025-11-26 12:31:57,817 | INFO     | sum of deviations: 455302917545.5446
[2025-11-26 07:32:30] 2025-11-26 12:31:57,818 | INFO     | mean x: 1764140605.0743034
[2025-11-26 07:32:30] 2025-11-26 12:31:57,818 | INFO     | mean y: 2998163.321981424
[2025-11-26 07:32:30] 2025-11-26 12:31:57,818 | INFO     | intersect: -9605550587.832401
[2025-11-26 07:32:30] 2025-11-26 12:31:57,818 | INFO     | chi2: 3.4197267110461724
[2025-11-26 07:32:30] 2025-11-26 12:31:57,819 | INFO     | current chi2=3.4197267110461724 (change=40.4851620154623 %)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,819 | INFO     | sum of square deviations: 81667971600.27148
[2025-11-26 07:32:30] 2025-11-26 12:31:57,827 | INFO     | sum of deviations: 413768134202.3719
[2025-11-26 07:32:30] 2025-11-26 12:31:57,827 | INFO     | mean x: 1764140757.578783
[2025-11-26 07:32:30] 2025-11-26 12:31:57,827 | INFO     | mean y: 3001449.527301092
[2025-11-26 07:32:30] 2025-11-26 12:31:57,827 | INFO     | intersect: -8934960586.636522
[2025-11-26 07:32:30] 2025-11-26 12:31:57,828 | INFO     | chi2: 3.3668853496527698
[2025-11-26 07:32:30] 2025-11-26 12:31:57,828 | INFO     | current chi2=3.3668853496527698 (change=1.5451925214584559 %)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,828 | INFO     | left removable region: 20
[2025-11-26 07:32:30] 2025-11-26 12:31:57,829 | INFO     | sum of square deviations: 73901430731.75963
[2025-11-26 07:32:30] 2025-11-26 12:31:57,837 | INFO     | sum of deviations: 608681125042.5432
[2025-11-26 07:32:30] 2025-11-26 12:31:57,837 | INFO     | mean x: 1764140727.0919354
[2025-11-26 07:32:30] 2025-11-26 12:31:57,837 | INFO     | mean y: 3024447.2887096773
[2025-11-26 07:32:30] 2025-11-26 12:31:57,837 | INFO     | intersect: -14527129459.978165
[2025-11-26 07:32:30] 2025-11-26 12:31:57,838 | INFO     | chi2: 0.06119376233785367
[2025-11-26 07:32:30] 2025-11-26 12:31:57,838 | INFO     | current memory leak: 8.24 B/s (using 620 data points, chi2=0.06)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,838 | INFO     | could have reported an average CPU frequency of 2394 MHz (25 samples)
[2025-11-26 07:32:30] 2025-11-26 12:31:57,838 | INFO     | ..............................
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . Timing measurements:
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . get job = 0 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . initial setup = 2 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . payload setup = 8 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . stage-in = 0 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . payload execution = 39681 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . stage-out = 3 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,839 | INFO     | . log creation = 0 s
[2025-11-26 07:32:30] 2025-11-26 12:31:57,840 | INFO     | ..............................
[2025-11-26 07:32:30] 2025-11-26 12:31:58,224 | INFO     | 
[2025-11-26 07:32:30] 2025-11-26 12:31:58,224 | INFO     | job summary report
[2025-11-26 07:32:30] 2025-11-26 12:31:58,224 | INFO     | --------------------------------------------------
[2025-11-26 07:32:30] 2025-11-26 12:31:58,225 | INFO     | PanDA job id: 6897139753
[2025-11-26 07:32:30] 2025-11-26 12:31:58,225 | INFO     | task id: 47556161
[2025-11-26 07:32:30] 2025-11-26 12:31:58,225 | INFO     | errors: (none)
[2025-11-26 07:32:30] 2025-11-26 12:31:58,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:32:30] 2025-11-26 12:31:58,225 | INFO     | pilot state: finished 
[2025-11-26 07:32:30] 2025-11-26 12:31:58,225 | INFO     | transexitcode: 0
[2025-11-26 07:32:30] 2025-11-26 12:31:58,226 | INFO     | exeerrorcode: 0
[2025-11-26 07:32:30] 2025-11-26 12:31:58,226 | INFO     | exeerrordiag: 
[2025-11-26 07:32:30] 2025-11-26 12:31:58,226 | INFO     | exitcode: 0
[2025-11-26 07:32:30] 2025-11-26 12:31:58,226 | INFO     | exitmsg: OK
[2025-11-26 07:32:30] 2025-11-26 12:31:58,226 | INFO     | cpuconsumptiontime: 308734 s
[2025-11-26 07:32:30] 2025-11-26 12:31:58,226 | INFO     | nevents: 1000
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | neventsw: 0
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | pid: 10242
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | pgrp: 10242
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | corecount: 8
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | event service: False
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | sizes: {0: 2284094, 1: 2284293, 6: 2284555, 11: 2284583, 39694: 2328033, 39698: 2337027, 39699: 2337211, 39705: 2337521}
[2025-11-26 07:32:30] 2025-11-26 12:31:58,227 | INFO     | --------------------------------------------------
[2025-11-26 07:32:30] 2025-11-26 12:31:58,228 | INFO     | 
[2025-11-26 07:32:30] 2025-11-26 12:31:58,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 07:32:30] 2025-11-26 12:31:58,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,258 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:32:30] 2025-11-26 12:31:58,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,258 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:32:30] 2025-11-26 12:31:58,258 | INFO     | job 6897139753 has completed (purged errors)
[2025-11-26 07:32:30] 2025-11-26 12:31:58,258 | INFO     | overall cleanup function is called
[2025-11-26 07:32:30] 2025-11-26 12:31:59,270 | INFO     | --- collectZombieJob: --- 10, [10242]
[2025-11-26 07:32:30] 2025-11-26 12:31:59,270 | INFO     | zombie collector waiting for pid 10242
[2025-11-26 07:32:30] 2025-11-26 12:31:59,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:32:30] 2025-11-26 12:31:59,271 | INFO     | collected zombie processes
[2025-11-26 07:32:30] 2025-11-26 12:31:59,271 | INFO     | will attempt to kill all subprocesses of pid=10242
[2025-11-26 07:32:30] 2025-11-26 12:31:59,354 | INFO     | process IDs to be killed: [10242] (in reverse order)
[2025-11-26 07:32:30] 2025-11-26 12:31:59,412 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:32:30] 2025-11-26 12:31:59,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:32:30] 2025-11-26 12:31:59,417 | INFO     | did not find any defunct processes belonging to 10242
[2025-11-26 07:32:30] 2025-11-26 12:31:59,419 | INFO     | did not find any defunct processes belonging to 10242
[2025-11-26 07:32:30] 2025-11-26 12:31:59,421 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:32:30] 2025-11-26 12:31:59,421 | INFO     | ready for new job
[2025-11-26 07:32:30] 2025-11-26 12:31:59,422 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:32:30] 2025-11-26 12:31:59,424 | INFO     | ***************************************
[2025-11-26 07:32:30] 2025-11-26 12:31:59,424 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:32:30] 2025-11-26 12:31:59,424 | INFO     | ***************************************
[2025-11-26 07:32:30] 2025-11-26 12:31:59,425 | INFO     | 
[2025-11-26 07:32:30] 2025-11-26 12:31:59,425 | INFO     | architecture information:
[2025-11-26 07:32:30] 2025-11-26 12:31:59,426 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:32:30] 2025-11-26 12:31:59,444 | INFO     | cat /etc/os-release:
[2025-11-26 07:32:30] NAME="CentOS Linux"
[2025-11-26 07:32:30] VERSION="7 (Core)"
[2025-11-26 07:32:30] ID="centos"
[2025-11-26 07:32:30] ID_LIKE="rhel fedora"
[2025-11-26 07:32:30] VERSION_ID="7"
[2025-11-26 07:32:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:32:30] ANSI_COLOR="0;31"
[2025-11-26 07:32:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:32:30] HOME_URL="https://www.centos.org/"
[2025-11-26 07:32:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:32:30] 
[2025-11-26 07:32:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:32:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:32:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:32:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:32:30] 
[2025-11-26 07:32:30] 2025-11-26 12:31:59,444 | INFO     | ***************************************
[2025-11-26 07:32:30] 2025-11-26 12:31:59,953 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 07:32:30] 2025-11-26 12:31:59,974 | INFO     | sufficient remaining disk space (17479761920 B)
[2025-11-26 07:32:30] 2025-11-26 12:31:59,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:32:30] 2025-11-26 12:31:59,975 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:32:30] 2025-11-26 12:31:59,975 | INFO     | update_server=False
[2025-11-26 07:32:30] 2025-11-26 12:31:59,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:32:30] 2025-11-26 12:31:59,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:32:30] 2025-11-26 12:31:59,976 | INFO     | aborting loop
[2025-11-26 07:32:30] 2025-11-26 12:32:00,398 | INFO     | all job control threads have been joined
[2025-11-26 07:32:30] 2025-11-26 12:32:00,981 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:00,982 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:01,026 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:32:30] 2025-11-26 12:32:01,054 | INFO     | all data control threads have been joined
[2025-11-26 07:32:30] 2025-11-26 12:32:01,183 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:01,186 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:01,223 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:32:30] 2025-11-26 12:32:01,403 | INFO     | [job] control thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:01,469 | INFO     | all payload control threads have been joined
[2025-11-26 07:32:30] 2025-11-26 12:32:02,020 | INFO     | [job] validate thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,059 | INFO     | [data] control thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,063 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,129 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,181 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,301 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,474 | INFO     | [payload] control thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:02,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:32:30] 2025-11-26 12:32:02,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:32:30] 2025-11-26 12:32:03,032 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:03,940 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:06,612 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:32:30] 2025-11-26 12:32:08,196 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586140620608)>', '<ExcThread(monitor, started 140585436419840)>']
[2025-11-26 07:32:30] 2025-11-26 12:32:13,221 | INFO     | all workflow threads have been joined
[2025-11-26 07:32:30] 2025-11-26 12:32:13,222 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:32:30] 2025-11-26 12:32:13,222 | INFO     | traces error code: 0
[2025-11-26 07:32:30] 2025-11-26 12:32:13,222 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:32:30] 2025-11-26 12:32:30,287 | INFO     | PID=3624 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 07:32:30] 2025-11-26 12:32:30,288 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:32:30] 2025-11-26 12:32:30,288 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:32:30] 2025-11-26 12:32:30,288 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:32:30] 2025-11-26 12:32:30,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:32:30] 2025-11-26 12:32:30,288 | INFO     | [monitor] control thread has ended
[2025-11-26 07:32:30] 2025-11-26 12:32:30,385 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:32:30] 2025-11-26 12:32:30,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:32:30] 2025-11-26 12:32:30,394 [wrapper] pilotpid: 3624
[2025-11-26 07:32:30] 2025-11-26 12:32:30,398 [wrapper] Pilot exit status: 0
[2025-11-26 07:32:30] 2025-11-26 12:32:30,416 [wrapper] pandaids: 6897139753
[2025-11-26 07:32:30] 2025-11-26 12:32:30,458 [wrapper] cleanup supervisor_pilot 14732 3625
[2025-11-26 07:32:30] 2025-11-26 12:32:30,462 [wrapper] Test setup, not cleaning
[2025-11-26 07:32:30] 2025-11-26 12:32:30,466 [wrapper] apfmon messages muted
[2025-11-26 07:32:30] 2025-11-26 12:32:30,470 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:32:30] 2025-11-26 12:32:30,475 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:32:30]  *** Error codes and diagnostics ***
[2025-11-26 07:32:30]     "exeErrorCode": 0,
[2025-11-26 07:32:30]     "exeErrorDiag": "",
[2025-11-26 07:32:30]     "pilotErrorCode": 0,
[2025-11-26 07:32:30]     "pilotErrorDiag": "",
[2025-11-26 07:32:30]  *** Listing of results directory ***
[2025-11-26 07:32:30] total 1302376
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 07:32:30] -rwx------ 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas       100 Nov 25 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:32:30] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 20:29 run_atlas
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas       105 Nov 25 20:29 job.xml
[2025-11-26 07:32:30] -rw-r--r-- 2 boincer umatlas 408252886 Nov 25 20:29 EVNT.47483658._002200.pool.root.1
[2025-11-26 07:32:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 20:29 start_atlas.sh
[2025-11-26 07:32:30] drwxrwx--x 2 boincer umatlas      4096 Nov 25 20:29 shared
[2025-11-26 07:32:30] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 20:29 input.tar.gz
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas         0 Nov 25 20:29 boinc_lockfile
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 20:29 pandaJob.out
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas        57 Nov 25 20:29 setup.sh.local
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas    991877 Nov 25 20:29 agis_schedconf.cvmfs.json
[2025-11-26 07:32:30] drwx------ 5 boincer umatlas      4096 Nov 25 20:29 pilot3
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas       533 Nov 26 07:23 boinc_task_state.xml
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas 906670480 Nov 26 07:31 HITS.47556161._001833.pool.root.1
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 07:31 init_data.xml
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas      1064 Nov 26 07:31 memory_monitor_summary.json
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas   1516240 Nov 26 07:31 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas   1915381 Nov 26 07:31 log.47556161._001833.job.log.tgz.1
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas      8670 Nov 26 07:31 heartbeat.json
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas        29 Nov 26 07:32 wrapper_checkpoint.txt
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 07:32 boinc_mmap_file
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas        95 Nov 26 07:32 pilot_heartbeat.json
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas       744 Nov 26 07:32 pilotlog.txt
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas   5481183 Nov 26 07:32 log.47556161._001833.job.log.1
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas       353 Nov 26 07:32 output.list
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas       620 Nov 26 07:32 runtime_log
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas   7413760 Nov 26 07:32 result.tar.gz
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 07:32 runtime_log.err
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas       668 Nov 26 07:32 cT9MDm8UBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuPMKDm0VOJsn.diag
[2025-11-26 07:32:30] -rw-r--r-- 1 boincer umatlas     21408 Nov 26 07:32 stderr.txt
[2025-11-26 07:32:30] HITS file was successfully produced:
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas 906670480 Nov 26 07:31 shared/HITS.pool.root.1
[2025-11-26 07:32:30]  *** Contents of shared directory: ***
[2025-11-26 07:32:30] total 1291952
[2025-11-26 07:32:30] -rw-r--r-- 2 boincer umatlas 408252886 Nov 25 20:29 ATLAS.root_0
[2025-11-26 07:32:30] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 20:29 start_atlas.sh
[2025-11-26 07:32:30] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 20:29 input.tar.gz
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas 906670480 Nov 26 07:31 HITS.pool.root.1
[2025-11-26 07:32:30] -rw------- 1 boincer umatlas   7413760 Nov 26 07:32 result.tar.gz
07:32:31 (32234): run_atlas exited; CPU time 306215.466279
07:32:31 (32234): called boinc_finish(0)

</stderr_txt>
]]>

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