Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
23:15:16 (1023143): wrapper (7.7.26015): starting
23:15:16 (1023143): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 23:15:16] Arguments: --nthreads 12
[2025-11-25 23:15:16] Threads: 12
[2025-11-25 23:15:16] Checking for CVMFS
[2025-11-25 23:15:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:15:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:15:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:15:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:15:16] 2.13.2.0 3658817 1371 63480 153310 1 59 12206379 16777217 1038 130560 0 1832151 99.992 57389 1216 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-11-25 23:15:16] CVMFS is ok
[2025-11-25 23:15:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:15:16] Checking for apptainer binary...
[2025-11-25 23:15:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:15:16] Running /usr/bin/apptainer --version
[2025-11-25 23:15:16] apptainer version 1.3.0-bp160.1.36
[2025-11-25 23:15:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:15:16] boinc-runner
[2025-11-25 23:15:16] apptainer works
[2025-11-25 23:15:16] Set ATHENA_PROC_NUMBER=12
[2025-11-25 23:15:16] Set ATHENA_CORE_NUMBER=12
[2025-11-25 23:15:16] Starting ATLAS job with PandaID=6896713774
[2025-11-25 23:15:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:02:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:02:47] 2025-11-26 08:01:42,689 | INFO     | intersect: -77863129097.50427
[2025-11-26 02:02:47] 2025-11-26 08:01:42,689 | INFO     | chi2: 3.484477339867208
[2025-11-26 02:02:47] 2025-11-26 08:01:42,689 | INFO     | sum of square deviations: 1246386160.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | sum of deviations: 101371944881.99998
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | mean x: 1764138962.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | mean y: 3524179.93081761
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | intersect: -143478651215.8973
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | chi2: 1.587550371429789
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | current chi2=1.587550371429789 (change=54.43935441146276 %)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | sum of square deviations: 1132458442.5
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | sum of deviations: 94808008741.50003
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | mean x: 1764138809.5
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | mean y: 3515393.2922077924
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | intersect: -147687986029.98892
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | chi2: 1.587292026552936
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | current chi2=1.587292026552936 (change=0.016273176681649036 %)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | right removable region: 153
[2025-11-26 02:02:47] 2025-11-26 08:01:42,690 | INFO     | sum of square deviations: 1246386160.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | sum of deviations: 20911621731.000008
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | mean x: 1764139267.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | mean y: 3522306.6855345913
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | intersect: -29594859171.096294
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | chi2: 1.9706465085168023
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | current chi2=1.9706465085168023 (change=43.44498998544491 %)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | sum of square deviations: 1132458442.5
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | sum of deviations: 12279435053.999985
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | mean x: 1764139419.5
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | mean y: 3533847.2467532465
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | intersect: -19125322996.391006
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | chi2: 1.9526836544994528
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | current chi2=1.9526836544994528 (change=0.9115208607792981 %)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | left removable region: 20
[2025-11-26 02:02:47] 2025-11-26 08:01:42,691 | INFO     | sum of square deviations: 729472282.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | sum of deviations: 33865223539.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | mean x: 1764139389.0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | mean y: 3603564.7218045113
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | intersect: -81895292714.98616
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | chi2: 0.008776137289427095
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | current memory leak: 46.42 B/s (using 133 data points, chi2=0.01)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | could have reported an average CPU frequency of 4197 MHz (9 samples)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | ..............................
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . Timing measurements:
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . get job = 0 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . initial setup = 3 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . payload setup = 2 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . stage-in = 0 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . payload execution = 9954 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . stage-out = 1 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | . log creation = 0 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,692 | INFO     | ..............................
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | 
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | job summary report
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | --------------------------------------------------
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | PanDA job id: 6896713774
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | task id: 47556161
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | errors: (none)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | pilot state: finished 
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | transexitcode: 0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | exeerrorcode: 0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | exeerrordiag: 
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | exitcode: 0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | exitmsg: OK
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | cpuconsumptiontime: 115873 s
[2025-11-26 02:02:47] 2025-11-26 08:01:42,729 | INFO     | nevents: 1000
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | neventsw: 0
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | pid: 1034240
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | pgrp: 1034240
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | corecount: 12
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | event service: False
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | sizes: {0: 2284262, 2: 2284524, 11: 2284552, 9960: 2314234, 9961: 2323228, 9963: 2323284, 9965: 2323722}
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | --------------------------------------------------
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | 
[2025-11-26 02:02:47] 2025-11-26 08:01:42,730 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | job 6896713774 has completed (purged errors)
[2025-11-26 02:02:47] 2025-11-26 08:01:42,748 | INFO     | overall cleanup function is called
[2025-11-26 02:02:47] 2025-11-26 08:01:43,763 | INFO     | --- collectZombieJob: --- 10, [1034240]
[2025-11-26 02:02:47] 2025-11-26 08:01:43,763 | INFO     | zombie collector waiting for pid 1034240
[2025-11-26 02:02:47] 2025-11-26 08:01:43,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:02:47] 2025-11-26 08:01:43,763 | INFO     | collected zombie processes
[2025-11-26 02:02:47] 2025-11-26 08:01:43,763 | INFO     | will attempt to kill all subprocesses of pid=1034240
[2025-11-26 02:02:47] 2025-11-26 08:01:43,845 | INFO     | process IDs to be killed: [1034240] (in reverse order)
[2025-11-26 02:02:47] 2025-11-26 08:01:43,882 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:02:47] 2025-11-26 08:01:43,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:02:47] 2025-11-26 08:01:43,885 | INFO     | did not find any defunct processes belonging to 1034240
[2025-11-26 02:02:47] 2025-11-26 08:01:43,887 | INFO     | did not find any defunct processes belonging to 1034240
[2025-11-26 02:02:47] 2025-11-26 08:01:43,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:02:47] 2025-11-26 08:01:43,888 | INFO     | ready for new job
[2025-11-26 02:02:47] 2025-11-26 08:01:43,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:02:47] 2025-11-26 08:01:43,890 | INFO     | ***************************************
[2025-11-26 02:02:47] 2025-11-26 08:01:43,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:02:47] 2025-11-26 08:01:43,890 | INFO     | ***************************************
[2025-11-26 02:02:47] 2025-11-26 08:01:43,890 | INFO     | 
[2025-11-26 02:02:47] 2025-11-26 08:01:43,891 | INFO     | architecture information:
[2025-11-26 02:02:47] 2025-11-26 08:01:43,891 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:02:47] 2025-11-26 08:01:43,900 | INFO     | cat /etc/os-release:
[2025-11-26 02:02:47] NAME="CentOS Linux"
[2025-11-26 02:02:47] VERSION="7 (Core)"
[2025-11-26 02:02:47] ID="centos"
[2025-11-26 02:02:47] ID_LIKE="rhel fedora"
[2025-11-26 02:02:47] VERSION_ID="7"
[2025-11-26 02:02:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:02:47] ANSI_COLOR="0;31"
[2025-11-26 02:02:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:02:47] HOME_URL="https://www.centos.org/"
[2025-11-26 02:02:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:02:47] 
[2025-11-26 02:02:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:02:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:02:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:02:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:02:47] 
[2025-11-26 02:02:47] 2025-11-26 08:01:43,901 | INFO     | ***************************************
[2025-11-26 02:02:47] 2025-11-26 08:01:44,403 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-26 02:02:47] 2025-11-26 08:01:44,410 | INFO     | sufficient remaining disk space (3848892579840 B)
[2025-11-26 02:02:47] 2025-11-26 08:01:44,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:02:47] 2025-11-26 08:01:44,410 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:02:47] 2025-11-26 08:01:44,410 | INFO     | update_server=False
[2025-11-26 02:02:47] 2025-11-26 08:01:44,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:02:47] 2025-11-26 08:01:44,410 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:02:47] 2025-11-26 08:01:44,480 | WARNING  | process 1034240 can no longer be monitored (due to stat problems) - aborting
[2025-11-26 02:02:47] 2025-11-26 08:01:44,523 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:02:47] 2025-11-26 08:01:44,523 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:02:47] 2025-11-26 08:01:44,524 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-11-26 02:02:47] 2025-11-26 08:01:44,525 | WARNING  | maxPSS not found in memory monitor output
[2025-11-26 02:02:47] 2025-11-26 08:01:44,525 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/2/PanDA_Pilot-6896713774/payload.stdout) since it has not been created yet
[2025-11-26 02:02:47] 2025-11-26 08:01:44,525 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-26 02:02:47] 2025-11-26 08:01:44,536 | INFO     | sufficient remaining disk space (3848892579840 B)
[2025-11-26 02:02:47] 2025-11-26 08:01:44,536 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-11-26 02:02:47] 2025-11-26 08:01:44,536 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/2/PanDA_Pilot-6896713774/HITS.47556161._000964.pool.root.1 since it does not exist
[2025-11-26 02:02:47] 2025-11-26 08:01:44,597 | INFO     | number of running child processes to parent process 1034240: 1
[2025-11-26 02:02:47] 2025-11-26 08:01:44,598 | INFO     | maximum number of monitored processes: 17
[2025-11-26 02:02:47] 2025-11-26 08:01:44,598 | INFO     | aborting job monitoring since job object (job id=6896713774) has expired
[2025-11-26 02:02:47] 2025-11-26 08:01:44,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:02:47] 2025-11-26 08:01:44,598 | INFO     | will abort loop
[2025-11-26 02:02:47] 2025-11-26 08:01:44,717 | INFO     | all payload control threads have been joined
[2025-11-26 02:02:47] 2025-11-26 08:01:44,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:02:47] 2025-11-26 08:01:45,063 | INFO     | all job control threads have been joined
[2025-11-26 02:02:47] 2025-11-26 08:01:45,226 | INFO     | all data control threads have been joined
[2025-11-26 02:02:47] 2025-11-26 08:01:45,415 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:45,415 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:45,603 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:45,614 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:45,722 | INFO     | [payload] control thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,068 | INFO     | [job] control thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,231 | INFO     | [data] control thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,316 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,386 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,401 | INFO     | [job] validate thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,534 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,676 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:02:47] 2025-11-26 08:01:46,794 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:46,801 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:50,741 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:01:55,377 | INFO     | job.realtimelogging is not enabled
[2025-11-26 02:02:47] 2025-11-26 08:01:56,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:02:47] 2025-11-26 08:02:15,270 | INFO     | PID=1027354 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 02:02:47] 2025-11-26 08:02:15,270 | INFO     | .. there are 2 such processes running
[2025-11-26 02:02:47] 2025-11-26 08:02:15,270 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:02:47] 2025-11-26 08:02:15,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:02:47] 2025-11-26 08:02:15,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:02:47] 2025-11-26 08:02:41,155 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:02:47] 2025-11-26 08:02:42,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002091403072)>', '<ExcThread(monitor, started 140001589303040)>']
[2025-11-26 02:02:47] 2025-11-26 08:02:42,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:02:47] 2025-11-26 08:02:42,405 | INFO     | [monitor] control thread has ended
[2025-11-26 02:02:47] 2025-11-26 08:02:47,206 | INFO     | all workflow threads have been joined
[2025-11-26 02:02:47] 2025-11-26 08:02:47,206 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:02:47] 2025-11-26 08:02:47,206 | INFO     | traces error code: 0
[2025-11-26 02:02:47] 2025-11-26 08:02:47,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:02:47] 2025-11-26 08:02:47,263 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:02:47] 2025-11-26 08:02:47,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:02:47] 2025-11-26 08:02:47,265 [wrapper] pilotpid: 1027354
[2025-11-26 02:02:47] 2025-11-26 08:02:47,267 [wrapper] Pilot exit status: 0
[2025-11-26 02:02:47] 2025-11-26 08:02:47,271 [wrapper] pandaids: 6896713774
[2025-11-26 02:02:47] 2025-11-26 08:02:47,289 [wrapper] cleanup supervisor_pilot 1211108 1027355
[2025-11-26 02:02:47] 2025-11-26 08:02:47,290 [wrapper] Test setup, not cleaning
[2025-11-26 02:02:47] 2025-11-26 08:02:47,292 [wrapper] apfmon messages muted
[2025-11-26 02:02:47] 2025-11-26 08:02:47,293 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:02:47] 2025-11-26 08:02:47,295 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:02:47]  *** Error codes and diagnostics ***
[2025-11-26 02:02:47]     "exeErrorCode": 0,
[2025-11-26 02:02:47]     "exeErrorDiag": "",
[2025-11-26 02:02:47]     "pilotErrorCode": 0,
[2025-11-26 02:02:47]     "pilotErrorDiag": "",
[2025-11-26 02:02:47]  *** Listing of results directory ***
[2025-11-26 02:02:47] total 1311324
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc    576529 Nov 24 23:12 pilot3.tar.gz
[2025-11-26 02:02:47] -rwx------. 1 boinc boinc     36292 Nov 24 23:51 runpilot2-wrapper.sh
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc      5112 Nov 24 23:51 queuedata.json
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc       100 Nov 25 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:02:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 23:15 run_atlas
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc       105 Nov 25 23:15 job.xml
[2025-11-26 02:02:47] -rw-r--r--. 2 boinc boinc     15847 Nov 25 23:15 start_atlas.sh
[2025-11-26 02:02:47] drwxrwx--x. 1 boinc boinc        76 Nov 25 23:15 shared
[2025-11-26 02:02:47] -rw-r--r--. 2 boinc boinc    590104 Nov 25 23:15 input.tar.gz
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc     10032 Nov 25 23:15 init_data.xml
[2025-11-26 02:02:47] -rw-r--r--. 2 boinc boinc 408080604 Nov 25 23:15 EVNT.47483658._002113.pool.root.1
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc         0 Nov 25 23:15 boinc_setup_complete
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc         0 Nov 25 23:15 boinc_lockfile
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc      2784 Nov 25 23:15 pandaJob.out
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc        63 Nov 25 23:15 setup.sh.local
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc    991877 Nov 25 23:15 agis_schedconf.cvmfs.json
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc   1516240 Nov 25 23:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:02:47] drwx------. 1 boinc boinc       414 Nov 25 23:15 pilot3
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc       531 Nov 26 01:58 boinc_task_state.xml
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc 924002322 Nov 26 02:01 HITS.47556161._000964.pool.root.1
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc        95 Nov 26 02:01 pilot_heartbeat.json
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc      1052 Nov 26 02:01 memory_monitor_summary.json
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc   1933144 Nov 26 02:01 log.47556161._000964.job.log.tgz.1
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc      8595 Nov 26 02:01 heartbeat.json
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc      8192 Nov 26 02:02 boinc_mmap_file
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc        28 Nov 26 02:02 wrapper_checkpoint.txt
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc      6385 Nov 26 02:02 pilotlog.txt
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc   1471206 Nov 26 02:02 log.47556161._000964.job.log.1
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc       353 Nov 26 02:02 output.list
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc       620 Nov 26 02:02 runtime_log
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc   3420160 Nov 26 02:02 result.tar.gz
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc      9397 Nov 26 02:02 runtime_log.err
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc       660 Nov 26 02:02 IecLDmm80h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFNJKDmtRJ49n.diag
[2025-11-26 02:02:47] -rw-r--r--. 1 boinc boinc     21296 Nov 26 02:02 stderr.txt
[2025-11-26 02:02:47] HITS file was successfully produced:
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc 924002322 Nov 26 02:01 shared/HITS.pool.root.1
[2025-11-26 02:02:47]  *** Contents of shared directory: ***
[2025-11-26 02:02:47] total 1304804
[2025-11-26 02:02:47] -rw-r--r--. 2 boinc boinc     15847 Nov 25 23:15 start_atlas.sh
[2025-11-26 02:02:47] -rw-r--r--. 2 boinc boinc    590104 Nov 25 23:15 input.tar.gz
[2025-11-26 02:02:47] -rw-r--r--. 2 boinc boinc 408080604 Nov 25 23:15 ATLAS.root_0
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc 924002322 Nov 26 02:01 HITS.pool.root.1
[2025-11-26 02:02:47] -rw-------. 1 boinc boinc   3420160 Nov 26 02:02 result.tar.gz
02:02:48 (1023143): run_atlas exited; CPU time 115766.558909
02:02:48 (1023143): called boinc_finish(0)

</stderr_txt>
]]>

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